Passer montanus (Eurasian tree sparrow): 120511555
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Entry
120511555 CDS
T07277
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120511555 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120511555 (BARD1)
04121 Ubiquitin system [BR:
pmoa04121
]
120511555 (BARD1)
03036 Chromosome and associated proteins [BR:
pmoa03036
]
120511555 (BARD1)
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120511555 (BARD1)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120511555 (BARD1)
Ubiquitin system [BR:
pmoa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
120511555 (BARD1)
Chromosome and associated proteins [BR:
pmoa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120511555 (BARD1)
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120511555 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
NIBRIN_BRCT_II
Siva
RTT107_BRCT_5
zf-rbx1
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
120511555
NCBI-ProteinID:
XP_039584740
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MREALRGRSGNQPAPGSPLRPAAPSMAPPGQPWSHTRAALGRLERALRCSRCAGVLREPV
SLGQCEHVFCLPCVGDCVGSGCPVCHVPAWVQDAQINRQLDNMIQLCSKLRQLLGAASSD
SAEDTCTPTDSELEKKSKKEQIKMWFSPRSKKIRCVVNRSQAGTKSNDLGQDTSSVYDFF
PSPPHEKPSKPTKRPTQRQIKKMKKKHLADINKEWSLEKPEQKKAEKAPKEKCVTICSQP
VVLCTEEPESPEERPQQESVKEADSSKNTEDVEVPPQVESPEKKGSSEVVCSARDSKENN
GAAETLLTIANEVTPLKRGREQCSLQGTPQSKRARRSEGGIPGKAGRQADGLGESLQGSP
TSPATEQTPAQIPSSASKLSDTGMKTRSAALQAINSSSFSESPSTPSTSKTCSQLATPLS
PSVLKSPGVNAIARRNYKGETLLHIASIKGDLAAVEQLLKNGADPNVKDNAGWTPLHEAC
NHGHREVVELLLQHGALVNTTGYQNDSPLHDAARNGHAAVAQLLLLHGASRHAVNIFGLR
PVDYAESKKMKSVLMLPVENESFSLNQPSEALSSSQPRNGPLGILGSNLSVKQQKLLNKL
AAVLKAQRCTEFNSRVTHLVIPDVPMPTTVKCMMAVLSGCWVLKFEWVQACLQSSAREQE
EKYEVQGGPRRGRLNRERLLPKLFDGCYFYFLGPFKKHQKSDLLELVKAAGGQVLLRQPK
PDSDVTQAINTVSYHAEPTSDQRLCTHYVIYDAASKFQPEKIRQGKVWMAPSSWLIDCVM
SFQLLPVQ
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggcgctgcgcggacgctcgggcaaccagccggccccaggcagccccctccgc
cccgccgccccctccatggcgccgcccgggcaaccctggtcccacacccgcgccgcgctg
gggcggctggagagggcactgcgctgctcccgctgcgccggtgtcctgcgggagcccgtg
tccctggggcagtgcgagcacgtcttctgcctgccctgcgtgggtgactgtgttggcagc
gggtgccccgtgtgccacgtgccagcctgggtgcaggacgcgcagatcaaccggcagctg
gataacatgatccagctgtgcagcaagctgcggcagctcctgggtgctgcctcctcagat
tcagcagaagatacatgcacaccgactgactcggagttggaaaagaagagcaagaaggag
cagataaaaatgtggttcagcccaagaagcaagaagattcgatgtgtcgtgaacaggagt
caggctggcactaaaagcaatgaccttggtcaagacacatcttcagtttatgatttcttt
ccttcccctcctcatgaaaagccctctaagccaacaaaaagaccaactcagagacagatt
aagaagatgaagaagaaacatctagcagacatcaacaaagagtggagcttagagaaacct
gagcagaaaaaagctgagaaggctcccaaggaaaagtgtgtgaccatctgcagtcaacca
gtagtgctgtgtactgaggaaccagagagccctgaagaaaggcctcagcaggagtctgta
aaggaagctgactccagcaaaaacacagaagatgtggaagttccaccacaggtagaatcc
ccagaaaagaaaggcagcagtgaggttgtgtgctctgcacgagatagcaaagaaaacaat
ggtgctgcagagacattgctgacaatagcaaatgaagttacacctttgaaacgtggaagg
gagcaatgcagccttcagggtactcctcagtctaaaagagcaaggagaagtgaggggggc
attcctgggaaggcaggcaggcaggctgatggcttaggggagtcactgcagggctccccc
acctccccagccactgaacagacaccagctcagattccttcctctgcatccaaactctct
gacactggaatgaagacaagatctgcagcccttcaggcaatcaacagttcttcattttca
gaatctccctctaccccatccacttccaagacttgcagtcaacttgcaacaccactcagt
ccttctgtgttgaaatcccctggagtcaacgcaattgccagaagaaattacaagggagag
actttgctccatattgcttccatcaagggtgacttagcagctgtggagcagctgctaaaa
aatggggcagatcccaatgtcaaagataatgctggctggacaccactgcatgaggcgtgt
aaccacgggcacagggaggtggtggagctgctgctgcagcacggggcgctggtgaacacc
acgggctaccagaacgactcgccgctgcacgacgccgccaggaacgggcacgcggccgtg
gcccagctgctgctgctgcatggcgcctcacgccacgccgttaatatatttggtctgcgg
cctgtggactacgcagaaagcaaaaagatgaaatctgtgctaatgttaccagtggagaat
gaatcattttcacttaaccagccctctgaggcactgagctccagccagccaagaaatgga
ccccttggtatactggggagcaatcttagtgtgaagcagcagaaattgctgaacaaatta
gcagcagtcctgaaggcccagaggtgcactgaatttaacagcagagtaactcatcttgtt
atccctgatgttccaatgccaactactgtcaaatgcatgatggctgttctgagtggatgt
tgggttctcaagtttgaatgggtacaagcctgcctgcagagctcagctcgggaacaagaa
gagaagtacgaagtccaaggtggccctcggcgagggcggctcaaccgggagcgcctgctg
cctaagttgtttgacggatgctacttctattttttggggcctttcaaaaagcaccagaag
agtgacctgctggagctggtgaaagcagcgggcggccaggtgctgctcaggcagcccaaa
ccagacagtgacgtgacacaggccatcaacaccgtgtcctaccacgcagagcccacctct
gaccagaggctctgcactcactatgtcatctatgacgcggcttccaagttccagccggag
aaaatccggcagggcaaggtgtggatggccccctccagctggctcatagactgtgtgatg
tcatttcagctcctgcctgtgcagtga
DBGET
integrated database retrieval system
