Penaeus monodon (black tiger shrimp): 119572410
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Entry
119572410 CDS
T08784
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119572410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoo03021
]
119572410
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119572410
Transcription machinery [BR:
pmoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119572410
Coactivators
SAGA/TFTC/STAGA complex
119572410
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119572410
STAGA complex
119572410
TFTC complex
119572410
SAGA complex
119572410
SLIK complex
119572410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
NBCH_WD40
ANAPC4_WD40
Ge1_WD40
Nup160
RMC1_N
eIF2A
Motif
Other DBs
NCBI-GeneID:
119572410
NCBI-ProteinID:
XP_037775451
EnsemblRapid:
LOC119572410
LinkDB
All DBs
Position
4:60407836..60419190
Genome browser
AA seq
653 aa
AA seq
DB search
MRKVRTEKVMAHVSDYLKRRNLESGGPGGSVTLTEQQVGILGLVSPSAPNTFTFSTTSTQ
HTHVDHQYVRLKSWMMEASEPCRSELSQVLFPLFVHLYLELVAATGRQAANKFFKKHYQV
FLVNRDYENTLSQVVSASSINSSGDMNSSPVIQNLKSGKYLVRLSELTLNYFLRYLKSSE
NPTLLQIFNTYIEVEVDESGAGSSGAVFRGPDLNTSSSTALVNGHTPDSLSSDASAYAAD
GMDCSPEELRKVKDIMARVRSAQPTAPSLCVYTVTNAYNGLSCANVNTEGQLLACGFEDS
VIKLWKLTPPLHDIGFGKKKTVVGPRGGISHTLLACDDSRIEDSGERDDDDKEEEATAAE
IRNGGRRRNRGGELFALRGHSGPVLDTAFSHDSNYLLSVSEDCSMRLWDLNSGNAVALYR
GHSYPVWCVAVAPLTMYVATGSYDTTARLWSTDATYPLRTFSGHTRAVDCVAFHPNGTYL
ATGSCDRSIRLWQVTDGDAARILLHHKSAINTMSFSPNGKYLASGSEDGTVVVWDLAGGR
VMTEISSSSQVNSGNTASGTPHQDSIMNVCWSTDSSLLVSASSDGCVRTSHLKQTPASND
GTNSWELNEVGQVHCSGSTNGGSGNNGASGVLLHTSLTSHNYLTSVIALDVER
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagtgaggacagagaaagtgatggctcatgtcagcgactacttgaagaggaga
aatctcgagagtgggggaccaggaggaagtgtgacgctaacagaacagcaggtggggatt
ttgggcctggtttctccctcggcccccaacaccttcaccttctccaccacctccacccag
cacacgcatgtggatcaccagtatgttaggctaaaatcatggatgatggaggccagtgag
ccatgccgatccgaattgtcccaagttctgtttccgctctttgtccacctgtaccttgag
ctggtagcggccacggggagacaagcggcaaacaagttcttcaagaaacattatcaggtg
ttcttggtgaaccgtgattatgaaaatacactctctcaggttgtaagtgcatcttctata
aattcttctggagacatgaattcttctcctgttatacagaatctcaagagtggcaagtac
ctggtacgtttaagtgaactgactttaaactactttctgcgatatctgaagtcaagtgag
aaccccacactgttgcagatattcaatacatacattgaggttgaggtggatgagtcaggt
gctggaagttcaggagctgtgttcagagggcccgatttgaacacttcttcctcaacagct
ttagttaatggtcacactccagactcattgtcctctgatgcctctgcttatgcagctgat
ggaatggattgtagcccagaagaactgcgcaaagtgaaagacatcatggctcgcgttcgg
tcagcccaacccactgccccttccttgtgtgtgtatacggtcacaaatgcttataatggc
ctgagttgtgccaatgtgaatacagaaggacagcttttagcctgtgggtttgaagacagt
gtaattaaattgtggaaattgacaccccctttgcatgatatagggtttggaaagaaaaaa
acagtagttggtcccagaggtgggatatcgcacacgttacttgcatgtgatgattctcgc
attgaagacagtggtgaaagagatgacgatgacaaagaggaagaagccacagctgctgag
attcgtaatggaggaaggagaagaaatcgtggtggggagctctttgcccttcgtggacac
agtgggcctgtgctggacacagcgttcagtcatgattcaaattacttgttatcagttagt
gaagattgctccatgagactgtgggacttaaatagtggtaatgcagtggctctgtataga
ggtcattcctatcctgtgtggtgtgtggctgtagcccctctcactatgtatgtggcaaca
ggctcatatgatacaactgcaagattgtggtccacggatgcaacataccccctacgcacc
ttttcaggtcacacaagagctgtagattgtgtggctttccatcccaatggcacttaccta
gctactggatcctgcgaccgtagtattagactctggcaagtcactgatggtgatgcagca
cggatccttctgcaccacaagtcggcaatcaacactatgtcattttctccgaatggaaag
tacctggcctctggcagcgaagacggcacagttgttgtctgggaccttgctggtggacgc
gttatgacagaaattagcagtagtagtcaagtcaatagtgggaacactgcctcaggtact
ccccaccaagactcaatcatgaatgtgtgttggtctaccgattcatccctccttgtgtct
gcatccagtgacggctgtgtgcggacaagtcatctaaagcaaaccccagcaagcaatgat
ggaaccaattcctgggaactgaacgaagtgggccaggttcattgcagcggaagtacaaat
ggaggaagcggcaataatggagcgtcgggagtcctgctccacacgtctctaacgtctcac
aattacctcacttctgtcattgctctcgatgtggagagatag
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