Paenibacillus mucilaginosus 3016: PM3016_13
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Entry
PM3016_13 CDS
T01757
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq00550
Peptidoglycan biosynthesis
pmq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PM3016_13
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmq01002
]
PM3016_13
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmq01011
]
PM3016_13
Enzymes [BR:
pmq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PM3016_13
Peptidases and inhibitors [BR:
pmq01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
PM3016_13
Peptidoglycan biosynthesis and degradation proteins [BR:
pmq01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PM3016_13
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Peptidase_S13
DUF2760
Motif
Other DBs
NCBI-ProteinID:
AFC27005
UniProt:
H6NSR5
LinkDB
All DBs
Position
17323..18627
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AA seq
434 aa
AA seq
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MFVRAKRICSTLAVTLLLHTTLAAVQPAAVRAEEAPPAQSTELQLNAKSAVLMDAATGQI
LYQYNADVAYPPASMAKMMTEYLVMEAVDQGKLKLDEMVTTSQYAADVIGSGQLLAANEQ
ATVDNLFAAMSIYSSNDASVALAERIAGTEEKFAQMMNDKAKEFGLSPQAHFNNATGLSI
ADLGKYAPKENKQETMLTAKDAAIIAYHMIKDHKKVLEYTKTSSRKFREKDAAPMVNWNW
MLEANKDNANFKRYAYTGLDGLKTGHTDEAGYCFTGTAERNGMRLISVVMGTPTEPKRFE
ETRKVLDYGFNNFESKQIAAAGAPISSMQTVNIKKGVETEVPVVTEQEMKLVVKKGTPDD
QIQVTGQAVADEAKLTAPIQKGQVVGTAKVTYNGSEHTVNLVAAQDVEKGSWIRLFFRAI
KNFFVDTINGAKKG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgtacgtgcaaagcgaatttgttccacattagcggttacgttactcttacatacg
acattggcagcagtccagcctgcagcagttcgggcagaggaagctcctccggcccaaagt
acggagcttcagctcaatgcgaagtcggccgtgctgatggatgcggcaacaggccaaatt
ttataccaatacaatgcggatgtagcttatccgccggccagtatggcaaaaatgatgacc
gaatatctggtcatggaagccgtggatcagggcaagctgaagctcgatgagatggtgacg
accagccaatatgcggccgatgttatcggttccggtcagctccttgcggctaatgagcag
gcgacggtagacaatttgttcgccgccatgtccatctattcgtccaatgatgcatccgta
gcccttgctgagcggattgcggggacggaagaaaagtttgcacagatgatgaacgacaaa
gcgaaggaatttggattgtcgcctcaggctcattttaacaatgcaaccggactctcgatc
gccgatctgggcaaatatgcaccgaaggaaaacaagcaggaaacgatgctgacggccaag
gatgcagctatcatcgcttatcacatgattaaggatcataagaaggtcctggaatatacc
aaaacctcttcccgtaagttccgtgagaaagacgcggcgccgatggtgaactggaactgg
atgctggaagccaacaaagataatgctaacttcaagcgttatgcttatacgggcttggac
ggtttgaaaacgggacatacggacgaagccggatactgttttacaggcacggctgagcgc
aacggcatgcgtctgatcagcgtggtcatgggaacgcctaccgaaccgaaacgttttgag
gagacccgtaaggtactggattatgggttcaacaattttgaatccaaacaaattgctgcg
gcaggtgcgccgataagttccatgcaaaccgtgaatattaaaaagggtgtggaaaccgaa
gtgccggtcgtcaccgagcaggaaatgaagcttgtggtgaaaaagggcacgccggatgac
cagattcaagtcactggacaagcagttgctgacgaggcgaagctgacggctccgatccag
aagggtcaggttgtcggaaccgccaaggtcacgtacaacggaagcgagcatactgtcaac
ctggtcgcagcccaggatgtggagaagggaagctggatccgcttgttcttccgggccatc
aaaaacttcttcgtggacacgatcaatggggccaaaaagggataa
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