Petromyzon marinus (sea lamprey): 116940395
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Entry
116940395 CDS
T09614
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K24895
dorsal root ganglia homeobox protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116940395
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116940395
BRITE hierarchy
Motif
Pfam:
OAR
Homeodomain
Motif
Other DBs
NCBI-GeneID:
116940395
NCBI-ProteinID:
XP_032806069
EnsemblRapid:
ENSPMAG00000014334
LinkDB
All DBs
Position
8:14630572..14636473
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AA seq
495 aa
AA seq
DB search
LIVTIILPTIPTSLARTHPPTHHSLTHSLPDIHHPPVHSSTHSLTNSLAHTFTHPSTHSP
IHESTHPTTHLPTHPLTHNSLALTRSPTDSLVHPSIPRLRHKVWFQNRRAKWRKTERGSG
DTDGDRESPGGEAAGAAGAAASKARASSPEPPRHRREATPSQPSGGRSSVGPPPFPPPAC
FPAMLALSTASYARALTQPGPPAGKEPSGDTTASARVSPFTAAAPPPLPMLPPRSRAGGG
VFCPCCVADPLAGPLPPMLPYGCPAPQRNASVAALRLRAREHAAALLQHTARLMPSADPA
HSAGAHVSMLRAQSLGLNLNLNLGSSFGLPPPPPRHAPPATSAAAAAVAAAAVSLSSSSS
TTTSSSPPPGLADSGVHLSSTRNHVGSGEGSAQMQQHMQQQMQQHMQQTALLLRQPLKPP
ALRSILHPMAPSGIHQQLASGSIGSGIAGLMDPNCTATLVTAVASSDGPAPGENARSLQA
RDSSSSSGSGSDHEL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ctcatcgtcaccatcatccttcccacaatcccaacgtcgctcgcgcgcacgcacccaccc
acccaccactcgctcactcactcactccccgacattcaccacccacctgttcactcctct
actcactcgctcacaaactcgcttgcccacacgtttacccacccatcgactcactcgccc
attcacgaatccacgcacccaaccactcatttaccgactcacccactcacccacaactca
ctcgctctcactcgctcacccaccgactcactcgttcacccatccatcccccggctccgc
cacaaggtttggttccagaaccggcgcgccaagtggcgcaagacggagcggggcagcgga
gacactgacggggaccgggagagccctgggggagaggcggcgggggcagcgggggcagcg
gcgtccaaggctcgagcctccagccccgagcccccgcggcatcgcagggaggcgacgccc
agccagcccagcgggggtcgctcgagcgtggggccgcctccgttcccgccgcccgcgtgc
ttcccggcgatgctggcgctcagcacggcctcgtacgcgcgcgccctcacgcagccaggc
cccccggccggcaaagaacccagcggagatacgaccgcgtccgcgcgcgtgagccctttt
acagcagcagctcctcctcctctccccatgcttcccccgcgctcgcgagcaggaggcggt
gtcttctgcccgtgctgcgtggccgaccctttggctggaccgctgcccccgatgctgccc
tacggctgcccggccccgcagcgcaacgccagcgtcgctgctcttcgcctgcgcgcccgg
gagcacgcggctgccctcctgcagcacactgcccgcctgatgccctcggctgaccccgct
cactcggccggagcgcacgtgtcgatgctccgcgcacagagcctcgggctcaacttaaac
ctgaacctgggctcttcgtttggtctccctcctcctcctcctcggcacgcacctcctgcc
acctccgcagcagcagctgcagtagcagcagcagcagtgtcgttatcgtcatcatcatca
acaacaacatcatcatcgccgccaccaggactcgcagattctggagttcacctgtcctcc
acgcgtaatcatgtgggcagcggtgaaggtagcgcccagatgcagcagcacatgcaacag
cagatgcagcagcacatgcagcaaactgccctgctattgcgacagcctctgaagccgcca
gctctccgcagcatcctgcacccaatggccccatcgggcatccaccagcagctggcgtct
ggcagcatcggcagcggcattgctggattgatggatccaaactgtactgcgacgctggtg
acggcagtggcctcctctgatggtccagctcctggtgagaacgcaaggagcttgcaagcc
agagacagcagcagcagcagcggcagcggtagcgatcatgaactgtga
DBGET
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