Petromyzon marinus (sea lamprey): 116942860
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Entry
116942860 CDS
T09614
Symbol
USP38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116942860 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116942860 (USP38)
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116942860 (USP38)
Peptidases and inhibitors [BR:
pmrn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116942860 (USP38)
Ubiquitin system [BR:
pmrn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116942860 (USP38)
BRITE hierarchy
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
ArgZ-like_C_1st
Motif
Other DBs
NCBI-GeneID:
116942860
NCBI-ProteinID:
XP_032811130
EnsemblRapid:
ENSPMAG00000006088
LinkDB
All DBs
Position
16:6612208..6630936
Genome browser
AA seq
1200 aa
AA seq
DB search
MDKILEGLLSSSHPLPVKRSVVKKVLEAAEGKLDGEQCQAMFTLATRLTLLSEDTFQRQV
GQQVLDAYARCHRAQFGDFFNSELVLGMLRQGYGSLGRRDARLLDFVQHGLRLSLSLPSV
LAVYASLRSEALRMVCERLRPSTACRLGELLIEFPQCLPREGQQAIVFCKQLVRTIGHFV
CPATAAEGDSADSEKAIREFIGHVNRVSGLLPKVWVSEPAALLPSLQEVFAIISTPDVPA
DPSIALASLVQYIPLQMTNVIIHSLTTDANVHDANMMVALCRMIDWLSWPLAQRVDCWVT
ALLKGLAAVNKFTILIDVTVLKIEQVLSRLWFPVVRAGALSVLSHMLLSFQHSPEAFHLL
LPHMPGLVTDLRKEASPTSMACLRQLSRLMQCMMYQYSGFPDLYEPILELFKDFPLLHED
DIKRTLTRSAWTSQRSASPTGPLQRAADRSETGRTGLVNLGNTCYMNSIIQALFMTTHFR
RAVLSLSLNGSRPLMGKLQLLFAFLAHTQRSAFEPRNFLEVSRPPWFTPGSQQDCSEYLK
YLLTRIHEEEKTLIQLSRNAKAAKQGPESSGILLTETQSAGGNPQDCKRTGAEALESPKE
VSEKDEERTLVEKMFGGKLLTRISCKNCRGVSERFEAFTDLSLAFPTQGVESAAKLDSVQ
PVTSSHLANEVSSVPNVTQHSALPSGCAQAPECQGVNVKDPTQLGISDEVSESACTFRSE
SPTGSTQASASTPATSVSDDSRCSQETETAETSNTKVDAATMTMPSDGIEHFTDVAVEVR
PGPHVLVGGNGVSVSSNERPPSKPEVVVCSPDSDTDRESESVPGLINYFLTPETLSGENR
YYCEACNSLQDAERATLVAESPEYLVLTLLRFSYDMRTHSRRKILRNVHIPPSLVLSARA
KMKCVPPPPKNHCSQDCSCNLKVSSGVDTDDSCCNAKSPLCKKMKHSEVELESDGFCDST
VPYVLTSVVVHSGMSSESGHYYSYARDCGKQRGGTRRCHRFSSSNNNLMPEGTAASPTGT
TSDLDESSAPPPDKDVDDRGPPSCQLPCATASKVDQEEEKTADESEEEEEEQGEEWLLFN
DSRVSFSSFGSVSGVTSRFPKDTAYVLIYRRRDRRPEGDGAACERLCFEPPLRKELMEAV
SRDNKLYLQEQELEARTRALRTSSSSSSYHRRDDDDSHSPGSCGPGGGGSGFSSISRLVF
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcctggagggtctgctgagctcatcgcacccgctgccggtgaagcgcagc
gtggtgaagaaggtccttgaagcggccgaaggcaaactggatggagagcaatgccaggcc
atgttcacgctcgccacacgcctcactctgctcagtgaagataccttccagagacaggtc
ggccagcaggtgctggacgcttacgcgcgctgccaccgcgcccagttcggcgacttcttc
aacagcgagctggtgctcgggatgctgcgccaaggctacggctcgctgggccggcgtgac
gcgcgcctcctcgactttgtgcagcacggcctacgcctgagcctcagcctcccgtccgtg
ctcgccgtgtacgcctcgctgcgctccgaggccttgcgcatggtgtgcgagcgcctccga
ccgtctacggcgtgcagactcggcgagctactcatagagttcccgcagtgtctgcccaga
gaggggcagcaggccattgtcttctgcaagcagcttgtgcggaccatcggtcactttgtc
tgcccggcgacggcagcagagggggacagtgccgacagcgagaaggccatccgggaattc
attgggcatgtgaatcgcgtcagcgggctgctgcccaaggtgtgggtgtcggagccggcc
gccctcctcccttccctgcaggaggtgtttgccatcatctccactccagacgtccccgcc
gatccatcaatcgcgcttgccagcctggtgcagtacatccccctgcagatgaccaacgtc
atcatccatagcctgacgaccgacgccaatgtccacgacgccaacatgatggtggccctg
tgcaggatgattgactggctgtcttggcctttggcccaacgtgtggactgctgggtgaca
gcattgctcaagggtctggctgccgtgaataaattcaccatcctcatcgatgtcaccgtc
ctcaaaatcgagcaggtgctgagtcggctctggttcccggtggtgcgagctggcgcgctg
tccgtgctctcgcacatgctgctcagcttccagcactcgcctgaggccttccacctgctg
ctgccacacatgccggggctggttacggatttgcgcaaagaggcgtctcccaccagcatg
gcgtgccttcggcagctgtcccgcctcatgcagtgcatgatgtatcagtactccggcttc
cctgacctctacgagccaatcctcgagctcttcaaggatttccccttgctgcacgaggac
gacatcaagcgcacgctcactcgcagcgcgtggacgtcgcagcgctcggcatcccccacg
gggcctctgcagcgggcggcagacaggtcggaaaccgggaggaccggcctcgtcaacctg
ggcaacacctgctacatgaacagcatcatccaggcgctcttcatgaccacacatttccgc
cgagcggttctgtctctgagcctcaacggctcacgtcctctgatgggaaaactgcagctt
ctcttcgcctttttggctcatacacagcgctctgcatttgagccgaggaatttcctggag
gtgtcgcgccccccgtggttcacgccgggctcccagcaggactgctccgagtacctcaag
tacctcctcaccaggatacacgaagaagaaaaaactctaattcagctaagtaggaatgca
aaagcagcaaagcaaggtccagagtctagcgggatcttgctgacagaaacacaatccgcc
ggtgggaatccacaagactgcaaaagaacaggtgctgaagctctagaatcaccgaaggaa
gtttctgagaaagacgaggagaggacgctggtggaaaaaatgttcggcgggaagttattg
acaaggatctcctgcaagaattgccgaggcgtgtcggagaggttcgaggcgttcaccgac
ctctccttggctttcccgacgcagggtgtcgagtccgctgcaaagcttgattcggtgcag
ccggtcacgagttcgcacttggccaacgaagtaagcagtgtgccaaatgtgacacaacac
tcggcactgccttcgggctgcgcgcaggcgcccgagtgtcaaggtgtgaacgtaaaggat
cccacgcagcttggcatcagtgatgaagtgagcgaatcggcgtgcaccttccgcagcgag
agccccacaggctcaacgcaagcaagcgcctctactccggccacaagcgtaagcgatgac
agtcgctgttcccaagaaacggaaacggcagaaacatctaacaccaaagtagacgctgcc
acgatgactatgccgagcgacggcatagaacatttcaccgacgttgcggtagaagtgcgg
ccgggaccccacgttctagtcggcggcaacggtgtctccgtctcgagtaatgaacgaccg
ccatcaaagccggaggtcgtcgtttgttcacctgactctgacacagacagggagtcggaa
agcgtgcccggtctgatcaattatttcctaacaccagagacactgagcggggagaaccgg
tattactgcgaggcgtgcaattccctgcaggacgcggagcgtgccacgttggtggccgag
agccccgagtacctggtcctgacgctgctgcggttctcctacgacatgcggactcactcc
cgccgcaagatcctgcgcaatgtgcacatccctcccagcctcgtcctctcagcacgggcc
aagatgaaatgtgttccgccaccgccgaagaaccactgctcgcaggactgcagctgcaac
ctaaaggtcagctcgggggtggacaccgatgactcctgctgcaatgctaagtctccgctc
tgcaaaaaaatgaaacattctgaagtggagctcgaatcggacgggttttgtgactcgact
gtgccgtacgtgcttacgtccgtagtggtgcattcggggatgtcttcggagagcggccac
tattacagctacgcccgggactgtgggaagcagcgcgggggcacgagacgctgccacaga
ttcagcagcagcaacaacaacctcatgccagagggcacggctgcatctcccaccggcacg
accagcgatctcgatgagtcttcagctcctccgcctgataaagacgttgacgatagaggc
ccgccgagctgtcaactcccttgtgccaccgcctcaaaggttgaccaggaggaagagaag
actgcagatgagtcggaggaggaggaggaggagcagggggaggaatggcttttgttcaac
gacagccgcgtgtctttctcgtcgtttggctccgtgagcggcgttacgagccgcttcccc
aaggacacggcgtacgtgctgatttaccggcgaagggaccgccggccggagggagacggt
gctgcttgcgagcgactttgctttgagccgcccctccgcaaggagttaatggaggctgtg
agccgcgacaacaagctctacctccaggagcaggagctggaggcacggacccgtgctctc
cgtacctcctcctcatcctcatcatatcaccgccgcgatgacgatgacagccactcgcct
gggagctgcggccctgggggtggaggcagtggattcagctccatcagccgcctagtcttt
tga
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