Petromyzon marinus (sea lamprey): 116946985
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Entry
116946985 CDS
T09614
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116946985 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116946985 (WDR33)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116946985 (WDR33)
BRITE hierarchy
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
116946985
NCBI-ProteinID:
XP_032818195
EnsemblRapid:
ENSPMAG00000005969
LinkDB
All DBs
Position
28:complement(7918091..7951666)
Genome browser
AA seq
1537 aa
AA seq
DB search
MDMTSPPRFFHMPKFQHQGPKHVFYKRSDFGQMDGMQQVTFDGKRMRKSVNRKTIDYNPS
VVKYLENRVWQRDHRDLRAIQPDPSYYGDLLPPMGMMHKPINAVTTKFVRTSTNKVKCPV
FVVRWTPEGRRLVTGASSGEFTLWNGLAFNFETILQAHDSSVRAMTWSHNDMWMLTADHG
GFVKYWQSNMNNVKMFQAHKEPIREASFAPTDNKFATCSDDGTVRVWDFMRCHEERILRG
HGADVKCVDWHPTKGLLVSGSKDSQQPIKFWDPKSGHSLATLHAHKNTVMEVKWNQNGNW
LLTASRDHLCKLFDIRNLKEEVQIFRGHKKEATAVAWHPIHEGFFASGGSDGSLLFWHVG
VEKEVGGTDVAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPG
NMSDDMIAEYDDNEPLSAPNIPGMGIAEQLKQVLEQEQKEKVVEAEPEVAIPGLDWGVEE
LIKEQKKLPTKKIPYSKPIPAQFQQAWQQNKLPMLPVGGNVKVQPPEDKKDKMKSQAEIR
QELTALQYTNPALYEQLKSDRITQKLMEQVQNQQQNQGPVQMQPPLGMMQKNMHPQGFSQ
GPMPGLQQHFPPNMPPGMMSGGPMGQFRPQGPPGLNMQQGPGPGPNWPHGMPGHMGNMQG
QMGLSGPLGPGGPQGPRGPQQGLGGSGMGQTPPSGGMQGGGPPSSLHMQGQQLRPQGGPP
NRPPSQGGPSNMAQPISMQGPMPSPMPGRGPMQGQGPMQGQGPMQGQGPMHGQGPMHGQG
PMQGQGQGSMQGQGQGPMQGQGPMQGQGSMQGPGPMQGQGPGPMQGQGPGPMQGQGPGPM
QGQGSGPMQGQGPGPMQGQGPGPMQGQGPMQGQGPMKGQGPMQGQGPMQGQGPMKGQGPM
KGQGPMQGQGPMQGQGPMKGQGPMQGQGPVQAQGPMQGPQQGPQHFGPQSGGFQGPPLSP
RSSLQSGSSEFIGTPREGPQQNASDGPRGGQLFEPPDSQGGPNQGPNSSPFSGHQGPSGP
GGLSPASLQQHGPPQGQGQAHQRGPPLRQGLLGDAPPGHSQGSSGPARIPTPNRSTAGSV
RGEGRPMLHQEEFGGDPVKEEPRDFQAPLERGGSLADQDEFDNPEFRGPPGPDDHGRQRH
FEEYGMEFGPGKREFEGRRDEGWNRGPTEENWQQRPGNSDEPWRRPPPGDEFAPFEDGSR
RRRDGARGGMLDRRRPSADRDLDDGRFGRRREDRFDPKFPGDGYPQQFEGDRPRDFEPRG
RRGRDGEPLPMDQFDDGFRRGGRDRDDDFPRQYEDDQRGLGHGRLLPRGEERRGDYPAPP
DSPSGVSRERPPSLLAMDTASLPLRKRPWHEGPGGLPGERRDGESGLSPLDDRPIRGGGG
PGRMDARDDPYRGEDEGPPSFMGPLNSGAGGMASLQRTPMQRGGNADWAHRRGGALRGAG
REGMTRGGREGMPREGMPREGMPRGGGGRDGMPRGGGRDIGPRGGGRDGGPRGGGVGRDG
GGPRGGSRDCMARGGGRDSGPRGGARDGVPGRGGRGR
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggacatgacatccccgccaaggttctttcacatgccaaagtttcaacaccagggcccc
aaacatgtcttctacaagcgctccgactttggccaaatggatggcatgcagcaagtcacc
ttcgatgggaagcgcatgcggaaatctgttaaccgtaaaaccatcgactacaacccttcc
gtagtcaaatacctggagaaccgagtatggcagagagaccacagagatctccgtgccatt
cagcccgacccgtcctactatggtgatttactaccgccaatgggaatgatgcacaaaccc
ataaatgcagtaaccaccaagtttgtcaggacatctacaaacaaagtgaaatgtcctgtc
tttgtcgtaaggtggacacctgaaggtcgacgtcttgtaactggagcctccagtggggag
tttacactgtggaacggtcttgctttcaacttcgagacaattctacaagcccatgacagc
tcagtccgcgcgatgacgtggtcgcacaatgacatgtggatgctgacggccgaccatggt
ggatttgtcaagtactggcagtcgaacatgaacaacgtgaagatgttccaggcgcacaag
gagcccatccgcgaagccagctttgctccaacggacaacaagtttgccacctgctcagac
gacggaacagtgcgagtgtgggacttcatgcgatgtcacgaggagaggatcctgagagga
catggagcagacgtgaagtgcgtggactggcaccccaccaagggactgctcgtgtctggc
agcaaggacagccagcagcccatcaagttctgggaccccaagtctggacacagcctggcc
acactgcatgcgcacaagaacactgtgatggaggtgaagtggaaccagaacgggaactgg
ctgctcacggcatcacgtgaccacctctgcaagctcttcgacatccgcaacctgaaggag
gaagtgcagatcttccgaggacacaagaaggaggccacagccgtggcttggcatccaata
catgagggtttcttcgcaagtggaggatcagatggatcattattgttctggcatgtcggg
gtggagaaggaagtcggtggcacagacgtggcacatgaaggcatgatctggagcttggcc
tggcacccgctgggacacatcctctgttcggggtccaatgaccacaccagtaaattttgg
acgaggaacaggccaggagacaagatgagagaccgatacaacctcaacctcctaccagga
aacatgtcagatgatatgattgcagaatacgatgacaatgagccactcagtgctcccaac
atcccaggcatgggcatcgctgagcagctcaagcaagtgctggaacaagagcagaaagag
aaggtagtggaggctgagccggaagtggcgatcccaggcttggactggggtgtggaggag
ctcattaaagaacagaagaaactccccacaaagaagatcccttactccaaacccatcccc
gcgcagttccagcaggcttggcagcagaacaaacttcctatgctccctgtgggtggcaat
gtgaaagttcagcctcctgaagataagaaagacaagatgaagtcacaggcggagattcgt
caagagctgacggcgctgcaatacacaaaccctgctctatacgagcaactgaagtctgac
cgtattactcagaaactcatggaacaagttcaaaaccaacagcagaatcaaggacctgta
caaatgcagcccccgctgggcatgatgcagaaaaatatgcaccctcagggcttttcccag
ggacccatgcctggcctacagcagcacttccctcccaacatgcccccaggcatgatgtct
ggtgggcccatgggccagttcagaccgcaagggcctcctgggctcaatatgcagcaaggc
cccggccctggaccgaactggcctcacggtatgcccggccacatgggtaatatgcaggga
caaatgggtctgtctggaccacttggacccggtggcccgcaaggtccccgtgggcctcag
caagggcttggcggttcaggaatggggcagacacccccatcgggtggcatgcaaggcggt
ggaccaccatcttcactgcacatgcaagggcagcaactgaggcctcaaggaggacccccc
aataggccaccgtcccaaggcggcccttcaaacatggcacagcccatctcaatgcaggga
ccaatgccctcgcccatgccgggccggggacccatgcagggccagggccccatgcagggc
cagggacccatgcagggccagggccccatgcatggccagggcccaatgcatggccagggc
cccatgcaggggcagggccagggctcaatgcaggggcagggccagggccccatgcagggc
cagggccccatgcagggccagggctccatgcagggccccggccccatgcagggccagggc
cccggccccatgcagggccagggccccggccccatgcagggccagggccccggccccatg
cagggccagggctctggtcccatgcagggccagggtcccggccccatgcagggccaggga
cccggccccatgcagggccagggacccatgcagggccagggacctatgaagggccaggga
cccatgcagggccagggccccatgcagggccagggccccatgaagggccagggacctatg
aagggccagggacccatgcagggccagggacccatgcagggccagggccccatgaagggc
cagggacccatgcagggtcagggaccagtacaggcccagggacccatgcagggaccacag
cagggcccccagcattttggaccccagtccggcggatttcaaggaccgccactctcccca
cgcagctctctgcaatccgggtcctcggaatttatcggaactcctcgtgaaggtccgcag
caaaatgccagcgacggacccaggggggggcagctctttgagccgcctgacagccaagga
ggcccaaatcaggggcccaattcatcgccgttcagtggccaccaaggccccagtggacct
gggggactgtcgcctgcgagcctacagcagcacggacccccgcaaggacaggggcaggca
catcaacgtggacccccgctgaggcaggggctcttaggagatgcccctccagggcactcg
cagggatcatcaggaccagcgaggattccgacaccaaacaggagcacagcgggttcagtc
cgaggtgaaggcagacctatgctgcatcaggaggaatttggtggggatcctgtgaaggaa
gaaccgcgagatttccaggcccccttggaacgcgggggatcccttgccgatcaggatgag
tttgacaaccccgaatttcgtgggccacctggccctgatgaccacggccggcaaaggcac
tttgaagaatacggcatggaatttggaccaggaaaacgagaattcgagggaagaagagat
gagggctggaatcgtggcccgacagaggaaaactggcagcaacggcctggaaattcggat
gagccctggaggaggccaccgcctggtgatgagtttgcaccattcgaggatggcagcagg
aggagaagggacggggctcgtggtggcatgctcgaccgacggcgcccttcggccgacagg
gacctggacgacggtcgctttggcaggcggagagaagacaggtttgaccctaagttcccg
ggcgatgggtacccgcagcagtttgagggcgatcgccctagagatttcgaaccccggggc
cgacgaggccgggacggagagcccctcccgatggatcagtttgacgatggcttccggcgc
ggaggacgggacagagatgacgattttccgcgtcagtatgaggacgaccagcgaggactt
gggcacggtcgcctgctgcccagaggcgaggagcggcgaggcgattatcccgcacccccc
gacagcccctcgggcgtctctcgcgaacggccaccctcgctgctcgcgatggacacggca
tctctgccgctgcgcaagcgaccgtggcacgagggacccggagggctccccggggagcgg
agggatggagaatctggcctatcgcccctggacgaccgcccaatcagaggcggtggcggt
cccgggcgcatggatgcccgcgacgacccgtaccgcggtgaggacgagggccccccttcc
ttcatgggccccctcaacagtggggccggcggcatggcgtcgctccagaggacccccatg
cagagaggaggcaacgcggactgggcgcacaggcgtggaggagccctccggggggccggc
cgagaggggatgacaaggggcggtagagagggcatgccgagggagggcatgccgagggag
ggcatgccgagggggggtggcgggcgagatggcatgcccaggggaggcggccgagacatt
gggccccgagggggcggccgagacggtggcccaagagggggtggcgttggccgggatggc
ggcggtccgagagggggcagtcgagactgcatggcgaggggcggtggacgagatagtggt
ccaagaggcggtgctcgagatggagtgcctgggcggggaggaaggggccgctga
DBGET
integrated database retrieval system
