Petromyzon marinus (sea lamprey): 116949465
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Entry
116949465 CDS
T09614
Symbol
BRPF1
Name
(RefSeq) peregrin
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116949465 (BRPF1)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
116949465 (BRPF1)
BRITE hierarchy
Motif
Pfam:
zf-HC5HC2H_2
EPL1
zf-HC5HC2H
Bromodomain
PHD_2
PWWP
PHD
Motif
Other DBs
NCBI-GeneID:
116949465
NCBI-ProteinID:
XP_032822730
EnsemblRapid:
ENSPMAG00000015538
LinkDB
All DBs
Position
36:complement(1301215..1333333)
Genome browser
AA seq
1526 aa
AA seq
DB search
MVGLDFDVRTYCCNLRATKPPYECPVSSCRKIYKSYSGIEYHLFHYEHGDGAGAPTPARK
PRGRKGRGGGGTSRAPSPGATGGGGGGAARSPGRDALTYAQAQRLVEVDLDGRVIRISIF
DSIEIVDEDEDETAPQPEEKEAAVAAAGGDERRQRNQNNGTGGQENGDSKNGVAGIKEEE
EATEGAGGGGGGGAQREVKHERTRHKDGGAAETGAGNKENADGTAQQHQQQPKSGRHKHK
ERRRDGGGGGDGGPGAGGGGAWTSAHQGAVATPGQAAPGAPAGPGSGSGSGSGGAAPSGV
ACAPAGGPAACKIPEAMFRVIEYDAPVAPARPSAYYRYIEKSSEELDEEVEYHMDEEDYA
WLEMMNERRHGEGLPPVTQESFELLMDRLEKESCFESRAKPLGGIQGDTAGAGGGANSTD
PSGASVPLPPPDEDALCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRR
CLQSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPP
ARWKLTCYVCKQRGSGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETGANGTSFSVR
KTAYCDIHTPPGSVRRPLLLTGSESDGEDGEGGAAGGCTPGWSAKKAKAKSKQKMKKARK
ILAERRAAVPIVSVPCIPPHRLSKIISRVSMQRKSQFMQRMHSYWTLKRQSRNGVPLLRR
LQSHLQSQRSMEQREHLGEKSHALKEQLKSWQRLRHDLERARLLVELIRKREKLKREQIR
AQEAVMEARLIPFVIFLRRTLELLQERDTGSIFSEPVCLEEVSDYLDHIKTPMDFSTMRQ
RVDSHEYRSMDTFASDFQLIVNNCMQYNAKDTIFYRAAVRLRDQGAVILRQARAAAERIG
FNYESGMHLPTAPAAPLAHDLVASRRGSKTGRGDRSLHRGGPAQSERHGAAGGAALKRRP
GRAEGPRVPRCGGGAPPPTTLSGGTRRGSARSASSSSSSSSSSSSSTSSPSSSSSEDEGG
GGVGAEGLERGSGGKGRAAAPGPRGQGPRGHGGERGHGGERGRAGGGGRGRGRGRAGRHG
GKRRLADGDAGSAAAAAAASVGDGGERVGGASRGLLLGDDDGGGSPLGPASLGGGSASPG
GGGCGGGGGGAGGGGGGSGGRASDVGRRTFVLFSKKSKPFPLQQQQQHQQQQQRRPGRPP
KHRESSGAAGPPAGPGPGQASSSSSTSSVGGPGGPGCVPAGAGAAAAVSAPPGSAPPGPR
KRPRSSSSSESDSDGSSCRLSHAGADEGFECIAQDANTQSFLIYRHKQSSSDSESTTSSS
SSAATDNTSASPDKQSRGKASFSRVNFTEDSSDETSGSDNETAGGAGGGGDSGGKGLPCA
SWDYDDDDDDDTPLEALDLVWAKCRGYPSYPALIIDPKMPREGFLHNGVPIPVPPLDVLK
LGETRIMEATEPLFLVLFFDNKRTWQWLPRSKLVALGVEQAIDKAKMLEGRKSNIRKSVH
VAYERAMLHRSKVTRGDPTSDSSDSD
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggtggggttggacttcgacgtgcgcacctactgctgcaacctccgcgccaccaagccc
ccctacgaatgccccgtgtcctcgtgccgcaagatctacaagtcctacagcggcatcgag
taccacctcttccactacgagcatggggacggcgcgggggcgcccacgccggcgcgcaag
ccccggggccgcaagggccgcggcggcggtgggacctccagggctccgtccccgggggcc
acgggcggcggcggcggcggcgccgctcgctctccggggcgcgacgccctcacctacgcg
caggcgcagcgcctggtggaggtcgacctggacggccgggtcatccgcatcagcatcttc
gactccatcgagatcgtggacgaggacgaggatgagacggcgccgcagccggaggagaag
gaggcggcggtggcggccgccggaggggacgagcggcgacagcgcaaccagaacaacggc
accggcggccaggagaacggcgacagcaagaacggcgtcgccggcatcaaggaggaggag
gaggccaccgaaggagcaggaggcggaggaggaggaggcgcgcaaagggaggtgaaacac
gagcgcacgagacacaaggatgggggagccgcggagactggcgccggcaacaaagagaac
gccgacggaacggcgcagcagcatcagcagcaacccaagagcggtcggcacaagcacaag
gaacgcaggagggacggaggaggagggggcgacgggggtccgggcgccggcggaggaggc
gcgtggacgtcggcccaccagggagcggtggccacccccggccaggccgctcccggggct
cccgcggggccggggtctggctcggggtccggctctgggggagcggccccctccggtgtg
gcgtgcgcgccggcggggggcccggccgcgtgcaagatcccggaggcgatgttccgcgtg
atcgagtacgacgcgccggtggcccccgcgcgccccagcgcctactacagatacatcgag
aagtccagcgaagagctcgacgaggaggtggagtaccacatggacgaggaggactacgcg
tggctggagatgatgaacgagcggcggcacggcgagggcctgccacccgtcacccaggag
tccttcgagctgctcatggatcgcctggagaaggagtcatgcttcgagagccgcgccaag
cccctgggcggcatccaaggcgacacggcgggggccggcggaggggccaactctaccgac
ccctctggggcatcggtgccgctgcccccgccggacgaggacgccctctgctgcatctgc
aacgacggcgagtgccagaatagcaacgtgatcctcttctgcgacatgtgcaacctggcg
gtgcaccaggagtgctacggggtgccctacatccccgagggccagtggctgtgccgccgc
tgcctgcagtcgccctcgcgggccgtggactgcgcgctgtgccccaacaagggcggcgcc
ttcaagcagacggacgacgggcgctgggcgcacgtggtgtgcgccctgtggatccccgag
gtgtgcttcgccaacaccgtcttcctggagcccatcgacagcatcgagcacatcccgccg
gcgcgctggaagctcacctgctacgtgtgcaagcagcgcggctcgggcgcctgcatccag
tgccacaaggccaactgctacacggccttccacgtgacgtgcgcccagcaggcgggcctc
tacatgaagatggagcccgtgcgcgagacgggcgccaacgggacgtccttcagcgtccgc
aagacggcgtactgcgacattcacacgccgcccggcagtgtgcggcggcccctgctgctg
acaggcagcgagagcgacggtgaggacggggagggcggcgcggccggaggctgcaccccg
ggctggtcggccaagaaagccaaggccaagtcgaagcagaagatgaagaaggcgcggaag
atcctggcggagcggcgcgccgctgtgcccatcgtgtccgtgccgtgcattcctccccac
aggctgagcaagatcattagccgcgtgtccatgcagcgcaagagccagttcatgcagcgc
atgcacagctactggacgctcaagcggcagtcccgcaatggcgtgccccttctgcggagg
ctgcagtcccacctgcagtcgcagcgatccatggagcagcgcgagcacctgggagagaag
agccacgcactgaaggagcagctcaagtcgtggcagcgtctgcgccacgacctggagcgg
gcgcgcctgctcgtcgagctcatccgcaagcgcgagaagctcaagcgcgagcagatccga
gcgcaggaggccgtgatggaggcgcggctaatcccgttcgtcatcttcctacgccggacc
ctggagctgctgcaggagcgagacacgggcagcatcttctcggagcccgtgtgcctcgag
gaggtgtcggactacctggaccacatcaaaacccccatggacttctccacgatgcggcag
cgcgtggactcgcacgagtaccgcagcatggacaccttcgccagcgacttccaactcatc
gtcaacaactgcatgcagtacaacgccaaggacacgattttttaccgcgcggccgtgcgg
ctcagggaccagggcgccgtgatcctgcggcaagcgcgagcggcagcggagcggatcggc
ttcaactacgagagcggcatgcacctccccacggcgccagccgctccgctcgcccacgac
ctcgtggcgtcgaggcggggaagcaagaccggccgcggtgaccgctccctccaccggggg
ggcccggcgcagagcgagcgacacggcgctgccggtggcgccgcgctgaagcggcgcccg
ggacgggcggaggggccgcgggttccccggtgcggggggggtgcccctcctcccacgacc
ctctcgggggggactcgccggggctcggcccgctcggcctcctcctcttcctcctcctcg
tcctcctcctcgtcgtccacctcttcgccgtcgtcttcgtcctccgaagacgagggcggc
ggcggcgtcggtgcggaggggctggagagaggcagcgggggcaagggtcgagcagcagcg
ccggggccacggggccagggaccgcggggtcacggcggggagcggggtcacggaggggaa
cggggtcgcgccgggggcgggggtcgcgggaggggtcggggtcgcgccggacgccacggt
ggcaagaggcggctcgccgacggcgatgccgggtccgcggcggcggcagctgcagcctcc
gtgggcgacgggggcgagcgcgtgggcggagcctcgcgggggctgctgctaggggacgac
gatggggggggctccccgctggggccggcgtccctcggggggggctcggcgtcgccggga
ggcggcggctgcggcggcggcggcggcggcgccggcggcggaggaggaggaagtggaggc
cgcgcgtccgacgtgggacgccgaaccttcgtgctcttcagcaagaagagcaagcccttc
cccctgcagcagcagcagcagcaccagcagcagcagcagcgccggcctggacgtcccccc
aagcaccgtgagtccagcggagcggcggggccgccggcgggtcccggaccgggccaggcc
tcgtcctcgtcgtccacctcgtccgtgggcggcccgggagggccggggtgcgttcccgcg
ggcgccggcgccgcggccgcggtctccgcgccgccgggctccgcgccgccgggccctcgg
aagcgccctcgcagcagctccagctcggagagcgacagcgacgggtcatcgtgccgcctc
tcgcacgccggcgcagacgagggcttcgagtgcattgcccaggacgccaacacgcagagc
ttcctgatctaccggcacaagcagagcagctccgactcggagtccacaaccagctcctcc
agcagcgccgccaccgacaacacgagcgcgtccccagacaagcagagccgaggcaaggcc
agcttctctcgggtgaacttcaccgaggacagcagcgacgagacctcgggctccgacaac
gagacagccgggggcgccggcggcggcggcgactctggtggcaaggggctgccgtgcgcc
agctgggactacgacgatgatgacgacgacgacaccccactggaggcgcttgacctcgtg
tgggccaagtgccgtggctatccctcgtacccggcactgatcatcgaccccaagatgccg
cgtgaaggcttcctgcacaacggcgtgcccatccccgtgccgcccctcgacgtgctcaag
ctgggcgagacgcgcatcatggaggccacggagcccctcttccttgtcctcttctttgac
aacaagcgcacctggcagtggctgccccgctccaagctggtggccctgggcgtggagcag
gccatcgacaaggccaagatgctggagggacgcaaatccaacatccgcaagtcggtgcat
gtggcgtacgagcgcgccatgttgcaccgcagtaaggtgacgcggggcgaccccacgtcc
gactccagcgactccgactga
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