Petromyzon marinus (sea lamprey): 116950568
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Entry
116950568 CDS
T09614
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5-like isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116950568
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116950568
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116950568
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116950568
Peptidases and inhibitors [BR:
pmrn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116950568
Ubiquitin system [BR:
pmrn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116950568
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116950568
BRITE hierarchy
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
UBA_3
DUF5869
Motif
Other DBs
NCBI-GeneID:
116950568
NCBI-ProteinID:
XP_032824350
EnsemblRapid:
ENSPMAG00000004816
LinkDB
All DBs
Position
39:complement(12326277..12361216)
Genome browser
AA seq
858 aa
AA seq
DB search
MAASPPRVVELVAAAVASVRVPRPGDRVYKDECVYSFHSPEMEGGLYLCLNSFLGFGREH
VERHYRRTGQRLYLHIQRTRKQEEDTSAARDEDPPRKKPTRLAIGVEGGFSVEADRAEYD
EVVRLVVFPEYLRLSLPELEQLPAIARERVNQACTAVLAADSASRRQEVEAWDGEVRNVS
PHALGLQQLDNGVRIPPSGWKCSRCDMRENLWANLTDGTVLCGRRYFDGTGGNGHALEHF
RETGFPLAVKLGTVTPDGADVFSYAEDEMVLDPSLSDHLAHFGIDMMAMHKTDKTMTELE
IDANQRVGEWEALQESGTQLTPLYGPGYTGMANLGNSCYLNSVMQVLFSVPDFRSKYVDG
LSRIFEESPMDPAQDFNTQVAKLGHGLLSGIYSQPPADTNSTEQVEQKGVSPRMLKTLIG
RGHPEFSTNRQQDAQELFLHFINLIERNSRGAENPTEAFRFLVEERIQCQRSQRVKYTQR
VDYIVQLPVPMEAAANKGELEEYECRRRESEASGCPAPELVRAHVPFSECLRAFSETESL
DDFWSSALQAKSHAIKTTRFASFPDFLVIQVKKFTFGLDWVPKKLDVSIDMPEELDLSHL
RGAGLQPGEAELPDMAPPPLATPDEPPKGIGIGERGALLSPDTMPSTPELDEAVVSQLCE
MGFPADACRKAVYFTGNAGVEPAMNWVITHMEDPDFAEPLMLGSSGAATPSGGARTPQEP
PPPDEESVAMIVSMGFTREQAVRALRATSNNLERAADWIFSHADDLDAVAMETSEGGSRG
DPASEAHTPAGPRVRDGPGRYRLFAFISHMGTSTMCGHYVCHIRKEGRWVIFNDQKVAAS
EKPPKDLGYIYFYERVAS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcgccccctcgcgtggtggagttggtggcagcggcggtggcgtcggtgcgc
gtcccgcgccccggggaccgcgtctacaaggacgagtgcgtctactccttccatagcccc
gagatggagggtggcctctacttgtgtctcaactccttcttggggttcggccgcgagcac
gtggagcggcactaccgcagaacggggcagcgcctctacctacacatccaacgcacacgc
aagcaggaggaggatacaagtgcagcccgagacgaggacccccctcgcaagaaacccacg
cggctcgccatcggagtggagggcgggttctcggtggaggctgaccgggccgagtatgat
gaggtcgtgagactggtggtgttccccgagtatctgcgcctgagtctccccgagctcgag
cagcttccggccatcgcccgcgagcgcgtgaaccaggcatgcactgcggtgctggcggcc
gactcggcgtcgcggcgccaggaagtggaggcgtgggacggggaggtcaggaacgtctcc
ccccacgcgcttggcctgcagcagctcgacaacggcgtgcgtattcctcccagcgggtgg
aagtgctcgcgctgcgacatgcgtgagaacctgtgggcgaatctgacggacggcacggtg
ctgtgcgggcgccgctacttcgacggcactgggggcaatggccacgcactggagcacttt
cgcgagactggcttcccgctcgccgtcaagctcggcaccgttacgcctgacggcgccgat
gtgttttcgtacgcggaggatgagatggttctcgacccgagtctgtccgatcacctggcg
catttcggcatcgacatgatggcgatgcacaagacggacaagacaatgacggagttggag
atcgacgcaaatcagcgcgtgggcgagtgggaggcgcttcaggagtcagggacgcagctc
acgccactctatggcccgggctacacggggatggccaacttggggaactcctgctacctc
aactccgtcatgcaagtgctcttcagcgtgcctgacttccgcagcaagtatgtggatggg
ttgtcacggatctttgaggagagccccatggacccagcccaggacttcaacacacaagta
gcgaaacttggccatggtctcctctctggcatctactcgcagccacccgctgacacaaac
agcactgagcaggtggagcagaagggagtttctccacgcatgctaaagactctgattggc
cgaggacacccggagttctcaactaatcggcaacaagatgcacaagaactcttcctccac
ttcatcaacctcatcgagcgcaacagccggggagcggagaacccgacagaggcgttccgc
ttcctggtggaggagcgcatccagtgtcagcgttcacagcgtgtcaagtacacacagcgc
gtcgactacattgtgcagttgcccgttcctatggaggcggctgccaacaagggtgagctg
gaggagtacgaatgccggcgccgcgagtccgaggcgtcgggctgcccggcgcccgagctg
gtacgtgcacacgtgcccttttccgagtgcttgcgcgcattctctgaaacggagagcctc
gacgacttctggagcagcgccctacaggccaagagccacgccatcaagacgacccgtttc
gcctccttccccgacttcctcgtgatccaggtcaagaaattcacgttcggcctcgactgg
gtccccaagaaactggacgtctccatcgacatgcctgaggagctggatctgtcgcacctg
cggggggcggggctccagccaggggaggcggagctcccggacatggccccgcctcccctg
gccaccccggatgagcccccgaaaggtatcgggattggagagaggggcgccctcctgtcc
cccgacaccatgccgtctacacccgagctggatgaggctgtggtaagccagctgtgtgag
atgggcttccccgcggacgcctgccgcaaggccgtctacttcacggggaacgccggcgtg
gagcccgccatgaactgggtcatcacgcacatggaggacccagatttcgcggagccgctg
atgctgggcagctcgggggcggcaacgccgtcggggggggcccgcaccccccaggaaccg
ccccccccagatgaagagagtgtagccatgattgtgtcgatggggttcactcgcgagcag
gcggtgagggcactccgagccacgagtaacaacctcgagcgtgcagctgactggatattc
agccacgctgacgacctggatgcagtcgccatggagacatcggagggtggttcccgtggc
gacccagcgagcgaggctcacacgccggccgggcctcgcgtgcgcgacggacccgggcgc
taccgcctgttcgccttcatcagccacatgggcacttccaccatgtgcggccactacgtg
tgccacatccgcaaggagggccgctgggtgatcttcaacgaccagaaggtggcggcttct
gagaagcctcctaaagaccttggatacatctacttctacgagcgtgtggcaagctag
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