Petromyzon marinus (sea lamprey): 116953109
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Entry
116953109 CDS
T09614
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13-like
Organism
pmrn
Petromyzon marinus (sea lamprey)
Motif
Pfam:
ADAMTS_spacer1
ADAMTS_CR_2
TSP_1
Reprolysin
ADAMTS_CR_3
TSP1_spondin
Reprolysin_3
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
116953109
NCBI-ProteinID:
XP_032828846
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All DBs
Position
50:5545198..5577703
Genome browser
AA seq
1530 aa
AA seq
DB search
MNSHSTPGHNSTASHNQSTSTSPDDDTGLNINGINPTTILHRIPNTTPTTAVNITHNPTT
KPTPNTTLNTTPITNHLNITTPSSSPAHNTAPNATNIHTADTTPSFAHNTAPNTTPTPST
TPNTTPNTTPSTTPSTTPNSTPSTTPSTTPSTTPSPTVTPSALAASAPNTTAGRPPLPVT
PPANATSAHSPSTSRTPASTPSGSRSPGRTPPEPRGLHVELVVVAGADVGRHHGEDTQRY
LLTNINIAAELLRLPSLGRQIHLHVVRLLLLGDSTPVELAVTENVTSSLTSFCRWHRSHN
PADDSHPDHADLALYVTRQDLVGTGGLRAVRGAAQLGGACSPAWSCLLAEDTGFDLGVTV
AHEIGHRSLAGSLDRGRPSVGGEAVNPGWTGETGRWSGQRRGRGRRSEQSFRSHRCLVTV
TCSFVQLGEVAECKGAVPTIGQTRFKNDSIHDDSLGITHDGEENDCGGGGGYIMAVEGAH
ASLSSTWSRCSRRQLLRFLSSGEAWCLADAPPAPAPAHPPVLPPVLPGLRYGADEQCRVM
FGHGATACSFSKDDKDVCSVLSCHTHRDDFSSCTRLHISLLDGTPCADHRRCVRGACVPF
TGAPSVEPVHGAWSAWGRFGDCSRTCGGGVTVRTRRCNSPRPALGGRTCDGTDVEAVMCN
RQPCASSSQFTFAVEQCSNASAEPSTTTAAAAAAAAAAAAGTRSALRYHAWAPTMVRGDW
RCQYRCETVGRSLRVSRGAAFVDGTRCEHPKEPALGLCVSGRCQARRCPPTHPRRLRTRP
LALGHSHPPTLAHAARFRLPQRSVEAPSQRPVEATRRTIAFMSAQEFGCDGVLGSGVLVD
ACGTCGGDGSSCYRINGTFHGGEAKKYVTFLRVPLNATSVHVSNTRSAYTHLGECVRVYR
CCSPRSQHLPPDGPVKGCTGDLCLCVARSGGAVVSVRAREAPSTEENGAIKSERACVLGG
LSQSQGRDQWWRIWDASIRQRIDPLLVGRVPVVAGRGSVSTNVSAPSALEDERLTYRLYL
TELKIPRTERLSIPGPVTQPTHVQVYRRYGREYGRAADPDIVFSFHLPHGQPLYQWEERR
APCSHTCGTAVVGAVDRDVVGGGAVRAGTTRALHVCVDPSLGSEVPPERCLLGGPRPLER
TVPCSRSLEPCPAPPHEVTAKAPASDGDGDDGFTSSSSSSTSSSSTSSSSTSSSSSSSTS
STSSSTSSSSLAAGTSSFGAASQGSRGGQGGSTTPSPVTSAPPVTPTTKTPLVTTQAAHD
AAPSTEFSTPTTPSSSSSSSSASSSAPSFSTSSMAPQLPASCGLQVTAPAGVVRLDARPG
VDCSVAFARPLGEVVSVHVLQHNMECSAGDYAMVLERLSWRRFCEGSRNTTLSSRTNNLV
VRLRAAGGRRGLRVAFAARRARRPQHRECDVQLTGTKGRIGAPQATVGGAATQPCRAYIN
VPPQRRIVLRAMLTSGGGRGGEQDGPCDGQVVVRDMETLKAVPVCGPRPLVWKSSGSRAE
IEFHGRLSKQTSSFIALYRAIDPGTPLSGT
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccattctacccctggccacaactctactgccagccataaccagagcacaagc
acaagccctgatgacgacactggcctgaacatcaatggcattaaccctaccaccatcctt
caccgtatccctaacactacccctaccactgctgttaacattacccataaccccaccact
aagcctaccccgaacactactcttaatactacccctatcaccaaccatctcaatatcaca
accccttcctctagccctgcccataacactgcgcctaacgctaccaatattcacactgct
gacacgacccctagttttgctcataataccgcacctaacactaccccgacccctagcacc
acccctaacactacccctaacactacgcctagcactacccctagcactacccctaacagt
acccctagcactacccctagcactacccctagcactaccccatcacccaccgtcaccccg
agcgccctggcagcctccgcaccaaacaccacggcaggccgcccgcccctccccgtgacc
ccgccggccaacgcgacctccgcgcacagcccctcgacgtcgcggacccccgcgtccacg
ccctcggggtcccggagccccgggcggaccccgccggagcccaggggcctccacgtggag
ctggtggtggtggctggggcggacgtggggcggcaccacggggaggacacgcagcgctac
ctgctcaccaacatcaacatcgctgcagaacttctccgtcttcccagcctgggcagacag
atccacctacacgtggtccggctactgctgctcggagactcgactccggtggaactggcc
gtgacggagaacgtcacctcgtcgctcacctccttctgtcgctggcaccgctcacacaac
ccggcggacgactctcaccctgaccacgccgacctcgccctctacgtcaccaggcaggac
ctggtgggcactggcggtcttcgcgccgtgcgcggtgccgctcagctgggtggcgcctgc
tccccggcctggagctgcctcctcgccgaggacacgggtttcgacctcggggtcaccgtc
gcccacgagatcggccacaggtcattagcagggtcgttagatcggggccgcccgtcggtt
gggggcgaggcggtgaaccccggctggacaggcgagaccggcaggtggtccggccaacgg
agaggtcggggtcggaggtcagagcagtcgttccggtcccacagatgtttggtgacggtc
acgtgcagctttgtccagctgggagaagtcgcagagtgtaagggagcagtgccaacaatc
ggtcaaactcggtttaagaatgactccatccacgacgacagcctcggcatcactcacgac
ggggaggagaacgactgtggcggtggcggtggctacatcatggcggtggagggggcgcac
gcgagcctctcctctacctggtctcgctgcagccgcaggcagctgctgcgattcttgagc
tcgggagaggcctggtgcctggcggacgcccccccggccccggcgcccgcccaccccccc
gtgctgccccccgtgctgccgggcctgcgctacggcgccgacgagcagtgccgcgtcatg
ttcggccacggcgccaccgcctgctccttcagcaaggacgacaaggacgtgtgcagcgtg
ctctcgtgccacacgcaccgcgacgacttctcaagctgcacgcggctgcacatctccctg
ctggacggcacgccctgcgccgaccaccggcggtgcgtgcgcggcgcgtgcgtgccgttc
acgggggcgccgtccgtcgaaccggtgcacggcgcgtggtcggcctggggccgcttcggc
gactgctcgcgtacctgcggcggcggcgtcacggtccgcacgcggcgctgcaacagcccc
cggcctgcgctcggagggaggacgtgcgatgggacggacgtggaggccgtcatgtgcaac
cgccagccgtgtgcctcctcgtcgcagttcaccttcgccgtggagcagtgcagcaacgcc
agcgctgagccgtccaccaccaccgcggcggcggcggcggcggcggcagcggcggcggcg
gggacccgctcggcgctgcgctaccacgcgtgggcgcccaccatggtgcgaggagactgg
cgctgccagtaccgctgcgagaccgtgggcaggagtctgcgagtgtcgaggggggcggcg
tttgtggacgggactcgctgtgagcacccgaaggagccggccctggggctgtgcgtgtcg
gggcggtgccaggcaaggcgatgccctcccactcacccacgccgcttgcgcacacgcccg
ctcgcactggggcactctcacccacccacactggcacacgccgcccgctttcgcctgccc
caacggtctgtcgaggctccgtcccaacggcctgtcgaggccacacggaggaccattgcc
ttcatgtccgcgcaggagtttggctgcgacggcgtgctgggctcgggagtcctcgtggac
gcgtgcgggacctgcggaggggacggctcctcctgctaccgcatcaacgggacattccac
ggcggggaggccaagaagtacgtcacattcctgcgcgtgcccctaaacgccacctctgtg
cacgtctcgaacacccgctcagcctacacacacctgggtgagtgcgtgcgtgtttacagg
tgctgctccccccgctcacagcacttgccccccgacggacctgtcaaaggctgcacggga
gatctttgtctttgtgtagcgaggagtggcggcgcagtggtgagtgtgcgcgcccgagag
gccccgtccaccgaggagaacggagcaattaaatcggagcgtgcgtgcgtgctcggtgga
ttgtcacaatcgcagggtcgcgatcaatggtggcggatttgggacgcctccatccggcag
cggatagacccgctgctggtgggccgcgtgccggtggtggccgggcgcggctcggtgtcc
accaacgtgtcggcgccctcggcgctggaggacgagcggctcacctaccgcctctacctc
accgagctcaagatcccgcgcacggagcgactctccatcccgggacccgtcactcagccc
acgcacgtgcaggtgtaccggcgctacgggcgcgagtacggccgcgccgccgaccccgac
atcgtcttctccttccacctgccccacgggcagccgctctaccagtgggaggagcggcgg
gcgccgtgctcccacacctgcggcacagcggtcgtcggggcggttgaccgtgatgttgtg
ggcggtggcgccgtgcgtgcagggacgacgcgggcgctgcacgtgtgcgtcgacccctcg
ctgggctccgaggtgccgcccgagcgttgcctcctgggcgggccccggcctttggagcgg
accgtgccgtgcagccggagcctggagccctgccctgccccgccgcacgaggtcaccgcg
aaagcgccagcgagcgacggcgatggtgatgatggttttacgtcgtcatcgtcgtcgtca
acatcgtcgtcgtcaacatcgtcgtcgtcaacgtcctcgtcatcgtcgtcgtcaacgtcg
tcaacgtcatcgtcaacgtcgtcgtcatcgctcgctgcgggaacgtcttctttcggagct
gcgagtcaggggtcacgcgggggtcaggggggttccacgaccccttccccggtgacctcc
gccccccccgtgaccccgaccaccaagacccctctggtcacgacccaagctgcgcatgac
gcggcaccctcgacagaattctcaactcccaccaccccttcctcctcctcctcctcctcg
tcagcctcctcgtcagccccctctttctccacctcctctatggctccacaactgcccgcg
tcgtgcgggctgcaggtgacggcgcccgcgggcgtcgtgcgcctcgacgctcgcccaggg
gtggactgcagtgtggcttttgctcgcccgctcggcgaggtcgtgtccgtgcacgtgctg
cagcacaacatggagtgcagcgccggcgactacgcgatggtgctggagcgactgtcgtgg
cggcgcttctgcgagggctcgcgcaacacgacgctctcgtcgcgcaccaacaacctcgtc
gtgcgcctgcgcgccgccggcgggcgccggggcctgcgcgtggccttcgccgcccggcgg
gcgcggcggccgcagcaccgagaatgcgacgtgcagctgacgggcaccaagggcaggatc
ggcgccccgcaggccacggtgggcggagcggccacgcagccgtgccgcgcgtacatcaac
gtgccgccacagcggcgcatcgtgctgcgggcgatgctcacgagcggcgggggacgggga
ggggagcaggacgggccgtgcgacggccaagtcgtggtgagggacatggagacgctgaag
gccgtccccgtgtgtgggcccaggcccctcgtgtggaaatcttccggcagtcgagcggag
atcgagttccacggccggctcagcaaacagacgtcatccttcatcgctctgtaccgcgcc
atcgaccccggcacacccctctccggaacatag
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