Petromyzon marinus (sea lamprey): 116955073
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Entry
116955073 CDS
T09614
Name
(RefSeq) inactive rhomboid protein 1-like isoform X1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Motif
Pfam:
iRhom1-2_N
Rhomboid
HTH_38
Motif
Other DBs
NCBI-GeneID:
116955073
NCBI-ProteinID:
XP_032831921
EnsemblRapid:
ENSPMAG00000026196
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Position
58:5423070..5461740
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AA seq
867 aa
AA seq
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MSDGAAESPSGLQRKKPAGLTINIPPRVDDVTDSTVSEAPLQASSELYHRSVSVPAGPGG
PLSPPEPSRPRHGPFQRQTSLAQSIRRGTAVWFGVDKEGGAVSRQQRWHQRSLRHCSQRY
GRLKPEVLRDLEQPSGSELGSFGGMEVPAQQIQRMHRVVDPLARGRQFRAPDAESEGLHV
PFTPRTPLSPRTPGGISHASFTSSRSAIGRMPTRRKRESVAKMSFRAAALLVRGRSLRDA
NLLRPQLGRQSFPKASFAEDDTADEDPDTSFFSKYGGLYEDGTLPDEVFESPPDSAVPQG
APAGALPSADAAKQAVKPPVLPMAVGWRKETTGGKSFTKLGVGDPAHRLQQDVVPGLAFQ
AKRGHKLDPKLRRLVQRSAKRKYGLGVVGKWLNRKYRTRRLDSYVQRQIDDMVDHRPYFT
YWLTSVHVLITLLSVCTYGIAPIGFAQHEDQESVLRNKGVYEIVKYVQQENFWIGPSSDD
LIHLGAKFSPCMRKDGQVSARIAQERGRENGTGCCVRNDGSGCVQMVREDCSETLATWIK
WPRYNPPALQGSPRTSGAVCGQQPELCEEPASTPPHEWPDDITKWPICTKKSGANRTSVT
HMDCTVTGHPCCIGTKGSCEITSREYCVFMHGHFHESATLCSQVHCMDDVCGLLPFLNPE
VPDQFYRLWLSLFLHAGVLHCLVSVVFQMTVMRDLEKLGGWARIAIIYLLSGITGNLASA
VFVPYRAEVGPAGAQFGLLACLFVELLQSWQLLASPGWALTKLLAILVMLLAFGLLPWID
NFAQMSGFVAGLLLSFTFLPYIAFGRADRYRKRVQIIGSALAFAGLFAGLILAFYIYPMN
CTWCEYLTCIPFTDEFCEKYELEGHIH
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacggcgcggcggagagtccctcggggcttcagcgcaagaagcccgcggggctg
acgatcaacatccctcctcgcgtggacgacgtcaccgactcgacggtgagcgaggcgccg
ctgcaggcatcgtcggagctgtaccaccggagcgtgagcgtaccggccggcccgggagga
cccttatccccgccggagccatcgcggccacgccatggccccttccagagacagacctcc
ctggctcagtccatccgaagggggacggccgtgtggttcggggtggacaaggagggcggc
gctgtatcgcgacagcagcggtggcaccagcggagcctccggcactgcagccagcgctac
ggacgcctcaagccggaggtgctgcgcgacctggagcagccgagcggcagcgagctgggc
tccttcggcggcatggaagtgcccgcgcagcaaattcagcgcatgcacagggtggtggac
cccctggcgcgaggccgccagttccgagcaccggacgcggagtcggagggcctgcacgtt
ccgttcaccccgcgcaccccgctctcgccccgcacgccgggcggaatttcccacgcctcc
ttcaccagctcgcgctccgccattggccgcatgcccacgcggcgtaagcgcgagtccgtc
gccaagatgagcttcagggcggctgcgctgctagtgcggggccgctcgctgagggatgcc
aacctcctgcggccccagcttggccgccagagcttccccaaggcgagctttgccgaagac
gacacggccgacgaggacccagacacctccttcttcagcaagtacggcgggttgtacgag
gacggcaccctgccggacgaggtgttcgagtccccgcccgactccgccgttccccagggg
gcgcccgcgggtgccctccccagcgcagacgcggccaagcaggcggtcaaaccgcccgtc
ctccccatggctgtgggctggcgcaaggaaaccacgggcggcaaaagttttacaaaactt
ggcgtcggcgaccctgctcaccgcttgcagcaagatgttgtacccggcctcgctttccag
gcgaaacgcggccacaagctcgacccgaagctgcgccgcctggtgcagcgcagcgccaag
cgcaagtacggcctgggcgtcgtgggcaagtggctcaaccgcaagtaccgcacccggcgg
ctcgacagctacgtgcagcgccagatcgacgacatggtcgaccaccggccgtacttcacc
tactggctgacgtccgtgcacgtgctcatcaccctgctctccgtgtgtacctacggcatc
gcccccatcggcttcgcgcagcacgaggaccaggagagcgtgctgaggaacaagggcgtg
tacgagatcgtcaagtacgtgcagcaggagaacttctggatcggccccagctcggacgat
ctcatccacctgggcgccaagttctcaccgtgcatgcgcaaggacgggcaggtgagcgcg
cgcatcgcccaggagcgcggccgcgagaacggcaccggctgctgcgtccggaacgacggc
tcgggctgcgtgcagatggtgcgcgaagactgctcggagacgcttgccacgtggatcaag
tggcccagatataaccctccggcgttgcagggcagcccccgcacgtccggcgccgtgtgt
ggacaacaaccagaactgtgtgaggaaccagcctcgactccaccacacgaatggcctgat
gacattaccaagtggcctatctgcactaagaagtcgggcgcaaacaggacgagcgtcacg
cacatggactgcacggtgaccggccacccgtgctgcatcggaaccaaaggcagctgtgag
atcacgtcgcgcgagtactgcgttttcatgcatggccatttccacgagtcggcgacactc
tgctcccaggtgcactgcatggatgatgtgtgtggactcctgcccttcctcaaccccgag
gtcccagaccagttctacaggctctggctttcgctcttcctgcacgccggggtgctgcac
tgtttggtgtcggtggtcttccagatgacggtgatgcgagacctggagaagctgggcggc
tgggctcgcatcgccatcatctacctgctcagcggcatcaccggcaacctcgcctctgcc
gtcttcgtgccgtaccgagccgaggtgggcccagccggcgcccagttcggcctgctggcg
tgcctcttcgtggagctgctgcagagttggcagctgctggcgagccccggctgggcgctg
acgaaactcctcgccatcctcgtcatgctgctggcattcggcctgctgccgtggatcgac
aacttcgcgcagatgtcgggcttcgtggcgggtctgctgctgtccttcaccttcctgccg
tacatcgcgttcgggcgcgccgaccgataccgcaagcgcgtgcagatcatcggctcggcg
ctcgccttcgccggcctcttcgcaggcctgatcctcgccttctacatctaccccatgaac
tgcacctggtgcgagtatctcacctgcatccccttcaccgacgagttctgcgagaagtac
gaactagaggggcacatccactag
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