Petromyzon marinus (sea lamprey): 116955429
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Entry
116955429 CDS
T09614
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04010
MAPK signaling pathway
pmrn04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116955429
04020 Calcium signaling pathway
116955429
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116955429
Ion channels [BR:
pmrn04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116955429
BRITE hierarchy
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
116955429
NCBI-ProteinID:
XP_032832395
LinkDB
All DBs
Position
59:33878..192087
Genome browser
AA seq
2155 aa
AA seq
DB search
MMTTSGDGTAVACVEVTVWECEPETPSRRPWHGLGPCQGMGGVAGLTLAQHGGSFIAGQF
LVPSHGSAAGAGGGAVRPRGFGNGSAGSGSGSGSGDVAGGEESPPPPAEVEEGAGGGPGT
APVAPRRRCAVLDPHDIIRAHEAHKARSTPKARRKEWEMSRLGDEASPLSSDLANRGGAG
IQQQQTMVGSGPAAGGGGMGGMGGGAGGGGAGTRGGGGGGGGGGAGGPGGPGQRAYKQTM
AQRARSMALYNPMPARRGCLDPNRSLFILGEDNPFRKLAKRITEWPPFEWMILTTIIANC
IVLALEQHLPDEDKTPLSKKLEETEPYFIAIFCFEAGIKILALGFLLHKGSYLRNGWNVM
DFVVVVTGLLANMGSYYDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIELL
LFFAILMFAIIGMEFYMGKLHSTCYNKRHQSWEDDRLCGVRPCPNNLVCQSGWIGPNFGI
TKFDNILFAILTVFQCITMEGWTDLLYYTNDVYGSRWNWLYFVPLIIIGSFFMLNLVLGV
LSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWICKAEEVMLAEEDRNAEEKSAFD
GKGAPPTSNRRATLRKSRNDLIHAEEGIGDLTMGSPFARASITGIKSDGASFQRKEKRLR
FCIRRMVKSQAFYWTVLCLVALNTLCVAMVHYKQPKELTEVLSYMEFVFLGLFLLEMMLK
MYGLGMQNYFHSSFNCFDFAVVIGSIFEIIWSTLQPRSAFGLRVLRALRLLRIFKVTKYW
SSLRNLVVSLLNSMKSIVSLLFLLFLFIVVFALLGMQLSGASEFNFDHSTPDTNFNTFPA
AIMTVFQILTGEDWNVVMYDAIVSQGGVDDGMFASLYFIVLTLFGNYTLLNVFLAIAVDN
LANAQELTKDEEEEEEAATHKLAMQKAREVAEVSPMSAANLSSKEPRLSSKPRSVWEQRA
NELRRQHLRATSTEALNASPFRTSSACYRPPPDPTATRPPQAAGAAGAAGAAVVGGGSGV
GVGGIAGAVPTGGLALGHPGRDDVFTGEREFLLTSSGLEAPRRPNGVPRDGELNGQRGAA
DGVRRDGHMGINATVGVPSLDAKGPGSEGNGKGGGKAEPSQLVKIPVTLTGPAGDSTQLQ
GAGKEDKEAEAEEGEGAEGDPTGPKPMVPFSSMFVFSTTNPVRRACHYVVNMRYFEMCIL
LVIAMSSIALAAEDPVDAGSIRNKVLRYFDYVFTGVFTFEMVFKMIDLGLVLHRGAYFRD
PWNILDFIVVSGALLAFAFSGGSGPQEPQGRQGGKDLNTIKSLRVLRVLRPLKTIKRLPK
LKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGRFFFCSDNSKDLEKDCRGYFL
EYKKNTVAEAKKREWQKFDFHYDNVLWAFLTLFTVSTGEGWPQVLMRSVQATYEDQGPSP
GYRMEMAIFYVVYFIVFPFFFVNIFVALIIITFQEQGDKVMSEYSLEKNERACIDFSISA
KPLTKHMPQNRNTFQYKMWKFVVSSSFEYFIMTMIALNTVVLMMKFHNAPVEYEQVLKYL
NIVFTVLFFMECQLKIIAFGTLNYFKDSWNIFDFVTVIGSVTDIVVTELIKKKNLNLSFL
RLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLN
DDTAIKEHNNFQNFFQALMLLFRSATGEAWHEIMLACLSGRECAKGTDIFEKDCGSDFAY
FYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDPAATGRIQ
FWDLYDMLRVIAPPLGLGKRCPQRVAYKRLVRMDMPIAEDRTVHFTTTLMALIRTALDIK
IAKGGADKFECDSELRREMMAIWPNISHKTLDLLVPPHRATDMTVGKVYAAMLIYNYYRQ
NKNRRSQLAQGDGQQSRKPSLFQRMLGSPRLDARPDMQAGQHPLLDGETQPGELTTSVSW
VTQRAQEMVQRTRQSRRIEPPFTGYGAVQTYELSALSCAGDPRASLEAQARATSLPRLTV
DAQARYLALSNPTPAARPPRPCAETPHSFAGGGGGSHSSSFVWCDGRCRLVPGVTGPRRC
AGASHFYLPLWRAALADKGLGKHSPALVDVMPASADETLNVETGAEFCLLCNHCC
NT seq
6468 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacgtcgggcgacggaaccgccgtggcgtgcgtcgaggtgactgtgtgggaa
tgcgaacccgagactccgagtcggcggccgtggcatggactgggaccctgccaggggatg
ggcggagtggcgggcctcacgttggctcagcacggcggcagcttcatcgcgggtcagttc
ctcgtgcccagccacggctcagcggccggcgccggtggcggtgccgttcgtccgcgtgga
tttgggaacggctcggcaggatctggctccggctcgggctcgggggacgttgcaggcggg
gaggagagcccccccccaccagcggaggtggaggagggggcgggcggtggcccgggcacc
gcgcccgtggccccccgacggcgatgcgcggtgctggacccgcacgacatcatccgagcg
cacgaggcgcacaaagcgcgcagcacccccaaggcgcgccgcaaggagtgggagatgtcc
cggctaggtgacgaggcatcaccgctctcctccgacttggccaaccgcggcggggccggc
atccagcagcagcaaacaatggtggggtcaggtccggctgctggtggtggtgggatgggc
gggatgggtggtggcgccggcggtggtggcgctggcacccgaggaggaggtggcggaggt
ggtggaggaggagcaggagggccgggtgggcctgggcagagggcctacaagcagacaatg
gcgcagagggcccgctctatggccctctacaatccgatgccggcgaggagagggtgcctc
gatcccaaccgatcactcttcattctgggagaagacaacccattcaggaaactcgccaag
cgcatcaccgagtggccgccgttcgaatggatgatcctgacgacgatcatcgccaactgc
atagtgctggcgctggagcagcatcttcccgacgaggacaagacgccactgtccaagaag
ctggaggagacagagccatacttcatcgccatcttctgcttcgaggcgggcatcaagatc
ctggcgctgggcttcctgctgcacaagggctcttacctgcgcaacggatggaacgtgatg
gacttcgtggtcgtcgttaccgggctgctcgctaacatgggcagctactacgacctgcgg
actctgcgtgccgtcagagtgttacggccgctcaagctcgtgtctggcatcccaagtctg
caggtggtactcaagtccatcatgaaggcgatgattcccttgctacagattgagctgctc
ctcttctttgccatcctcatgttcgccatcatcggcatggagttctacatgggcaagctg
cacagcacctgctataacaaacgtcaccaatcctgggaggacgaccgcctgtgtggggtg
cgaccttgccccaataacctcgtgtgccagtcgggctggatcggccccaacttcggcatc
accaagttcgacaacatcctcttcgcgatcctcaccgtcttccagtgcatcaccatggag
gggtggacagacctcctctactatactaacgacgtgtacgggagcaggtggaactggctc
tacttcgttcccctcatcatcatcggctccttcttcatgctcaacctcgtgctgggagtt
ctgtctggggagtttgccaaggagcgtgagcgtgtggagaaccgccgcgcctttctcaag
ctgcgtcggcagcagcagatcgagcgcgagctcaacgggtacatggagtggatctgcaag
gccgaagaggtgatgcttgcggaagaggacaggaacgcggaggagaagtctgccttcgac
ggtaagggcgccccccctaccagcaatcggagggccacgctacggaaaagccggaatgat
ttaatccacgcagaggaagggatcggtgatcttacaatgggctccccgttcgcccgcgcc
agcatcaccggcatcaaatccgacggcgccagcttccagcgcaaggagaagcgcctgcgc
ttctgcatccgccgcatggtgaagtcgcaggcgttctactggacggtgctctgcctggtg
gcgctcaacacgctctgcgtcgccatggtccactacaagcagcccaaggagctcaccgaa
gtgctttcttacatggagtttgtgttcctgggtctcttcctgctggaaatgatgctcaag
atgtatgggctcgggatgcagaactacttccactcctccttcaactgcttcgactttgcg
gtggtgatcggcagcatcttcgaaatcatctggtccactctgcagcccaggtcggcgttc
ggcctcagggttctgcgggccctgaggcttctgaggatcttcaaggtgaccaagtactgg
tcatctttgcggaatctggttgtgtctctgctcaactccatgaagtccattgtgtccctc
ctcttcctgctcttcctcttcatcgtcgtcttcgctctgctgggcatgcagctctcgggg
gccagtgaatttaacttcgaccacagcacccccgacacgaacttcaacaccttcccggcg
gccatcatgaccgtgttccagatcctgacgggcgaggactggaacgtggtgatgtacgat
gccatcgtgtcgcagggcggcgtcgacgacgggatgttcgcctccctctacttcatcgtc
ctcaccctcttcgggaactacaccctcctcaacgtcttcctggccatcgctgtggacaat
ctcgccaatgcccaggagctgaccaaggacgaggaggaggaagaggaggctgccacgcat
aaactcgccatgcagaaagcccgggaggtcgcggaggtcagccccatgtcggccgccaat
ctgtccagcaaggagccacggctctcctccaagccacgctccgtgtgggagcagcgcgcc
aacgagctgcggcgccagcacctgcgcgccaccagcacggaggccctcaacgccagcccc
ttccgcacctcgtcggcctgctaccggcccccgcccgaccccacggccacgcggcccccg
caggccgccggagccgccggagccgccggagccgccgtcgttggcggcggctccggtgtc
ggagtcggcggaatcgccggcgccgtgccgaccggaggcctggcgctcgggcacccgggc
cgcgatgacgtgtttaccggagagagggagttcctcctcacctcctcgggcctggaggcc
ccgcggagacccaacggagtgccgcgggatggggagctcaacgggcagaggggcgccgcc
gatggcgtgcgcagggacggccacatgggcatcaacgccaccgtcggcgtgccctccctc
gacgccaagggcccagggtcagagggcaacggcaagggtgggggcaaggccgagccgagc
cagctggtgaagatcccggtcactctcaccgggcccgccggagactccacgcagctgcaa
ggcgcggggaaggaggataaagaggcggaggcggaggagggggagggggcggagggcgac
cccacgggccccaagcccatggtgcccttcagttccatgttcgtcttcagcaccaccaac
cctgtgcgccgtgcgtgccactacgtggtgaacatgcgctacttcgagatgtgcatcctc
ctggtcatcgccatgagcagcatcgcgctcgccgcagaggaccccgtcgatgccggctcc
atccgcaacaaggtgctgcggtacttcgattacgtcttcactggggtcttcaccttcgaa
atggtctttaagatgatcgacctgggcctggtgctccaccgtggggcctacttccgcgac
ccctggaacatcctggacttcatcgtcgtgagcggcgccctcctcgcgtttgccttctca
ggcggttccgggccccaagaaccgcaagggaggcagggaggcaaggatctgaacaccatc
aagtccctgcgcgtgttgcgcgtgctgaggcccctgaaaactatcaagagactccccaaa
ctcaaggccgtgttcgactgcgtagtgaactcgctgaagaacgtcctcaacatcctcatc
gtctacatcctcttcatgttcatcttcgccgtcatcgctgtgcagctcttcaaggggcgc
ttcttcttctgcagcgacaactccaaggatctcgagaaggactgcaggggctacttcctg
gagtacaaaaagaacacggtggccgaggcgaagaagcgcgagtggcagaagttcgacttc
cactacgacaacgtcctgtgggccttcctcacgctcttcaccgtgtccactggggaggga
tggcctcaggtgctcatgcgctcggtgcaggcgacttacgaggaccaggggcccagcccc
ggctaccgcatggagatggccatcttctacgtcgtctacttcatcgtcttccccttcttc
ttcgtcaacatcttcgtggcgctcatcatcatcaccttccaggagcaaggcgacaaggtc
atgtccgagtacagcctcgagaagaacgagcgcgcctgcatcgacttctccatcagcgcc
aagccgctgaccaagcacatgccccagaaccgcaacaccttccagtacaagatgtggaag
ttcgtcgtctcctcctcctttgagtacttcatcatgaccatgatcgccctcaacaccgtc
gtgctcatgatgaagtttcacaacgcccctgtggaatatgagcaagtgctgaaatacctg
aacatcgtcttcaccgtgctcttcttcatggagtgccagctcaagatcatcgccttcggg
accctgaactacttcaaagactcgtggaacatattcgactttgtcacggtgatcggcagc
gtgacggatattgtggtgacggagctcatcaagaagaagaatctgaacctcagtttcctg
cggctcttccgagcggcacggctcattaagctgctgcgccagggctacaccatccgcatc
ctgctgtggaccttcgtgcagtccttcaaggccctgccctacgtgtgcctcctcatcgcg
atgctcttcttcatctacgccatcatcggcatgcaggtgtttggtaacatcaagctgaat
gacgacacggccatcaaggagcacaacaacttccagaacttcttccaggcactcatgttg
ctcttcaggagcgcgacgggcgaggcgtggcacgagatcatgctggcgtgcctgagtggg
cgcgagtgcgccaagggcacggacatcttcgagaaggactgtggcagcgactttgcctac
ttctacttcgtctctttcatcttcctctgctccttcctgatgctgaacctcttcgtggcg
gtcatcatggacaactttgagtacctgacacgagactcctccatcctgggcccgcaccac
ctggacgagtttgtgaggatttggggggagtacgaccccgcggctaccgggcgcatccag
ttctgggacctctacgacatgctgagggtgatcgcgcctccgctggggctgggcaagcgg
tgtccacagcgcgtggcctacaagcgcctggtgcggatggacatgccgatcgcggaggat
cgcaccgtgcacttcaccacgacactcatggcgctcatccgcaccgccctggacatcaag
atagccaagggtggtgcggacaagtttgagtgtgacagcgagctgcgccgggagatgatg
gccatctggcccaacatctcccacaagacgctggacctgctggtgcccccacacagagct
acggacatgacggttggcaaggtgtacgctgccatgctcatctacaactactacaggcag
aacaagaaccggcgctcgcagctggcgcagggagacgggcagcagagccgcaagccgtcg
ctcttccagaggatgttggggtcgccccgcctggacgcccggccggacatgcaggcgggc
cagcatccactgctcgacggagagacgcagccgggtgagctcaccacgtcggtgtcgtgg
gtgacccagcgagcccaggagatggttcagaggacgcggcagagccggcgcatcgagccc
cccttcaccggatacggcgccgtgcagacgtacgagctgagcgccctctcctgcgccggc
gacccccgcgcttcgctggaggcccaggcccgcgccacctccctcccccgtctcaccgtc
gacgctcaggcacgttacctcgccctctctaaccctacccccgccgcccgccccccgcgg
ccgtgcgcggaaactccacattcctttgccgggggagggggggggtcacacagttcatcc
ttcgtttggtgtgacggccgctgtcggttggttcccggtgtcacggggccgcgacgttgt
gccggtgcttctcacttctatttacctctgtggagggcggcacttgccgataaaggtctg
ggcaaacattcgccagcattggttgatgtcatgcctgcatctgctgatgagacgctgaac
gtcgaaacgggtgcagagttttgcttgctttgtaaccactgctgctga
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