Petromyzon marinus (sea lamprey): 116955999
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Entry
116955999 CDS
T09614
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger homeobox protein 3-like
KO
K09378
zinc finger homeobox protein 3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmrn03000
]
116955999
Transcription factors [BR:
pmrn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
116955999
BRITE hierarchy
Motif
Pfam:
Homeodomain
Homeobox_KN
zf-C2H2_4
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
116955999
NCBI-ProteinID:
XP_032833276
LinkDB
All DBs
Position
63:7540637..7551603
Genome browser
AA seq
2314 aa
AA seq
DB search
MGEDGEKSERPGTSREKASLGVGTSGDQKGFLCWKKGCGQQFATPGALQAHFAEAHAKQR
HLESSHPELSDGDVRQICGSVGIGFRVGRREPSPAEGGGDDAAGAAGARRPAGRRHKRAL
PFRKGTNFLMDKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLNRLKKTLQGSGGPSG
GAAQGDAVASAGDSKPYRCATCNVAYSQSSTLEIHMRSVLHQTKTRAALQESAAAASGGG
GGGCGGKRGRRRRFGGRRAAGRERPRQGPGGPGGSAHKPEATPEYAEGAEEGARGGAADA
VVRPAGSGPGAGPGAGFGTRSNAGPGAAGAGAVPAGAAAATAAASLPSAPALQPGTAAPF
LHDDGSLHAAAAAAAILLSLRPLRRRPSAAPGDGPARVVRRVRHVQRGRLHPGRAEVAAA
GQQQQQQQQQQQQQQQQQQQQQALQLLSEEIENRSAEEDEKMEEAQDEDVDGESTTAPAA
GPGEEPGDAQHQQPGGSEERVPPPRIPAYARGNAVRALLENFGFELVIQYNENRQRSALA
GGERRGADASGKIECRDCGKLFSNILVLKSHQEHIHLQILPIEELSRYSKQYRKTYDKVY
PIRPDSPETQALPAQQQQQQQQLQPPPPPPPPPPPPTSSAAPKLATPPAPRSPRSLRPTR
WCCPSWRCPLDQLPMLSPLMMQPMQLQSMASQLSSQFMPWSRSPPTLCSSTTSTTSRRCS
SSSSSRQWTRPCSCSSSSSRASRPRTRITEEQLNVLKAYFDINNLPSDEQIQEMAENTGL
SHKVIKHWFRNTLFKERQRNKDSPYNFNNPPTTSLDDLRVEPPAAPAAPAVPPCRRPPSR
RRSPELPTQQLQQQQQQQLQMETLSSRRSSRTRFTDYQLKILQDFFDANAYPKDDELEQL
SGLLSLPTRVIVVWFQNARQKARKSYESQIEGRGRKKREVLLNDRYVRTGNMNYQCRKCS
VVFQRIFDLITHQKKHCYRDEEDSYTREDNQMDDSSDATDMGNSSGYTPPPAQPQRDAPA
PSSFQTPDGDSRGAPSPKTEPAEEKPKEGMVEREQREQQLQQQREQQLQQQLQQQLQQQL
QQQQQLQQHHHQLQSQQEEQPKPKPHQPQSSHHHHQLLSSSQQGPMQPAPYNSLALQLLP
YQCEQCKLSFPTFEQWQEHQQTHMLSAQNPFAHTPPSWSAPRRMPFVMFDPRSSSLVPGA
ALSGALPHVPSQSAPSPATPASSAGAEERADVAGKADGERLDEPHKDKRLRTTITPEQLE
VLYGKYMIDSNPTRKMLDHISSEVGLKKRVVQVWFQNTRARERKGQFRSFGMVQAHRRCP
FCRALFKAQTALDTHIRSRHWHEARQSGYNVFPSPGAPSPGHTTGQGRRRWRRRRRRLRA
LRSAWCSPSRRSAMSAGCDNRSALLSQMKMMGDNSPTGLSHLAHQRREQLLRQGHRSSPR
PKGRWRAARRTATLRPTTTTMAAAAAAAARWKTAARPARARRAARTATASRPRRRPPTTS
GRRRRTRRRFSRRRRRSAARADGGDGVSSSGPVSPGLSLSTTLDFEMNDYSETSSLADPR
TPSPLGGLAFSQSKLSSSSDDRPGHKRYRTQMSNLQLKVLKACFGEYRTPTMHECEILGN
DIGLPKRVVQVWFQNARAKDKKFKLSVAKQFGADAAGRGGRREGAAPRGGRCGLCGVQYT
ARLSVRDHVFSLQHIGKLKESLGSQLDGEKFLDPALFRQFMAQQELDRIKKANESIGLGL
PPAAAAAAANSSHEAPCHVPNGPQVPGLGLSSAYSAVPGLSPMLIPGVGGSPALPNFGPS
PAAMTTPQSGAHRLPDVGDPPPGVTAPAAGPQQITAAAAAAAERRHGCRSRRARRGAKMP
PAATTRTPTSGRNPTPRRSARRRDAAAQQARADHAQPAGPAGRAGRRVERDGGGRPPRRA
AAALLRLPTLPPYFNGPQLPTAAAAAAVLQGGYLQSLYGVDASGLFPYGPAFAQAALANG
LAAGSLLQQQVQQYQQNVQEVLQQQQQQQQQMTQAAQPSNGSVQGQHDRGGRSAKEAGDG
ADEGAGPPGKGKGAAADAPTKQGLAEHCEMKCSLVCRKCQMVFSDETLALAHQKSLCYFG
LGKVDARETLVRVPSGQYQCKACDVTLLGEDGLRRHLQSSSHRQQVAAKRATSDAKEQQQ
QQQQHARLLLPHSFRATDAASTSQQQQQQQQQQPVPDDGGGFSAAGSSCAAPVACAKSWP
PFATPVTPPSLPQTRFLPALVTASLANSAAVAASAGMDAQVPAAAAAASPQPPVSLSGRS
GDADQGGKATSLASERAIAAYGMISERESQSVGS
NT seq
6945 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggatggtgaaaagtccgagaggcccggcacgtcccgagagaaggcctcgctg
ggcgtgggcacgagtggcgaccagaagggcttcctgtgctggaagaaggggtgcggccag
cagttcgcgacgcccggggcgctgcaggcccacttcgccgaggcccacgccaaacagcga
cacctcgagtcgagccacccagagctgagcgacggcgacgtgcgccagatctgcggcagc
gtcggcatcggcttccgggtcggccgccgggaaccgtcgccggccgagggaggaggcgac
gacgcggcgggcgcggcgggcgcacgacgacctgctgggcgacgccacaagcgggcgctg
ccgttccgcaagggcaccaacttcctgatggacaagttcctggacccgtcgcggccgtac
aagtgcaccgtgtgcaaggagtcgttcacccagaagaacatccttctcgtgcactacaac
tcggtgtcgcacctcaaccgcctgaagaagacgctgcagggctccggcgggccgtccggc
ggcgccgcgcagggcgacgccgtcgcgagcgccggcgacagcaagccctaccggtgcgcc
acctgcaacgtggcctacagccagagctccacgctcgagatccacatgcgctccgtgctg
caccagaccaagacgcgggcggcgctgcaggagtcggccgcggcggcgtcgggcggcggc
ggcggcggctgcggcggcaaaaggggacggcgccggcgcttcggcgggcgccgtgcagca
ggccgcgagcgaccacgccaaggcccaggcggccccggcggctcggcgcacaagccggag
gcgacgccggagtacgcggagggcgccgaagaaggcgcacgcggaggcgccgccgacgcc
gtcgtcaggccagcaggctcaggcccaggcgcaggcccaggcgcaggctttggcacgcgc
tcaaacgcaggccctggtgcagcaggcgcaggcgcagttccagcaggagctgcagcagca
acagcagcagccagccttccttcagcaccagctcttcaacccggcactgctgcccccttt
ctccatgacgacggaagccttcatgcagctgcagcagcagcagccattcttctttccctt
cggcctctccggcgccgaccttcagctgcaccaggagatggtcctgcccgggtcgtccgg
cgcgttcgccatgtccagcgcggccgcctccatcctgggagagctgaagtcgcagcagca
gggcaacagcagcagcaacaacagcagcagcagcagcagcaacagcagcagcagcaacag
cagcaggcgcttcaactgctgagcgaggagatcgagaatcggagcgccgaggaggacgag
aagatggaggaggcgcaggacgaggatgtcgacggcgagtccacgacggcaccggcggcg
ggccccggcgaggagccgggcgacgcgcagcaccagcagccgggcggctccgaagaacgc
gtgccgccccccaggattccggcgtacgcccggggcaatgcggtgcgggcgctgctggag
aacttcggcttcgagctggtgatccagtacaacgagaaccggcagaggtcggcgctggcg
ggaggagagcgccgcggcgccgacgcctcgggcaagatcgagtgcagggactgcggaaag
ctcttctccaacatcctggtgctcaaaagccaccaagagcacatccacctccagatcctg
cccatcgaggagctcagccgctactccaagcagtaccgcaagacctacgacaaggtctac
ccgatcaggcccgactcgcccgagacgcaggcgctgccggcgcagcagcagcagcagcag
cagcagctccagccgccgccgcctccgccgcctccgccgcctcctccgacctcgtccgcc
gccccgaagctggccacccctccggcaccccgcagcccgcgcagccttcgccccaccaga
tggtgctgtcccagctggcgctgccccctggaccagctgcccatgctgtcgccgctgatg
atgcagccgatgcagctgcagtcgatggcgtcgcagctgtcctcgcagttcatgccatgg
agtcgatcaccgccgactttgtgcagctctaccacctccaccaccagcagaagatgcagc
agcagcagcagcagcaggcagtggactcggccctgctcctgcagcagcagcagcagcaga
gcaagccggccgcgcacccgcatcacggaggagcagctgaacgtgctcaaggcctacttc
gacatcaacaacctgccgagcgacgagcagatccaggagatggccgagaacacgggcctc
tcgcacaaggtcatcaagcactggttccgcaacacgctgttcaaggagcgccagcgcaac
aaggactcgccctacaacttcaacaacccacccaccacgagcctcgacgatctgcgggtg
gagccgccggcggcaccggcggcgccggcagtgccgccgtgccgccgccccccaagccgg
cgccggtcccccgagctcccgacccagcagctgcagcagcagcagcagcagcagctacag
atggagacgttgtcgagccggcgctcgagccgaacgcgcttcaccgactaccagctcaag
atcctgcaggacttcttcgacgccaacgcctaccccaaggacgacgagctggagcagctg
tccggcctcctgagcctgccgacgcgcgtcatcgtcgtgtggttccagaacgcgcggcaa
aaggcgcgcaagagctacgagagccagatcgagggcaggggacggaagaagcgcgaggtg
ctgctcaacgaccgctacgtgcgcaccggcaacatgaactaccagtgccgcaagtgcagc
gtggtgttccagcgcatcttcgacctcatcacccaccagaagaagcactgctaccgcgac
gaggaggacagctacacgcgcgaggacaaccagatggacgactcgtccgacgccacggac
atgggcaactcgtccggctacacgccgccgccggcgcagccgcagcgcgacgcgccggcc
ccctcgtcgttccagacgcccgacggcgactcccgcggagctccgagccccaaaaccgaa
cccgccgaggagaagccgaaggagggcatggtggagagggagcagcgggagcagcagctg
cagcagcagcgggagcagcagctgcagcagcagctgcagcagcagctgcagcaacagctt
cagcagcagcagcagctgcagcagcatcatcatcagctgcaaagtcagcaggaagagcag
ccaaaaccaaaaccgcatcaacctcagagcagccatcatcatcatcagctgctgtcgtcg
tcgcagcaggggccgatgcagccggcgccgtacaacagcctggcgctgcagctgctaccc
taccagtgcgagcagtgcaagctctcgttccccaccttcgagcagtggcaggagcaccag
cagacgcacatgctctcggcgcagaaccccttcgctcacacccctccgtcctggagcgcc
ccgcggagaatgcccttcgtgatgttcgacccgcgctccagctcgctcgtgccgggcgcc
gcgctctcgggcgcgctgccgcacgtcccgtcgcagtcggcgccgtcgcccgcgacgccg
gcgtcgtccgccggcgccgaggagagggccgacgtcgcgggcaaggcggacggcgagcgg
ctcgacgagcctcacaaggacaagcggctgcggacgaccatcacgcccgagcagctggag
gtgctctacggcaagtacatgatcgattcgaaccccacgcgcaagatgctggaccacatc
tccagcgaggtgggcctcaagaagcgcgtggtgcaggtgtggttccagaacacgcgcgcc
cgcgagcgcaagggccagttccgctcgttcggcatggtgcaggcccaccggcgctgcccg
ttctgccgcgccctcttcaaggcccagacggcgcttgacacgcacatccgctcacgccac
tggcacgaggcgcgccagtcgggttacaacgtcttcccgtcgcccggcgcgccgagcccc
gggcacaccacaggccaaggacggcggcggtggcggcggcggcggcggcggcttcgagca
cttcgctcagcatggtgttctcccagccgccgttcggcaatgagcgccggctgcgacaac
cggtcggcgctgctgtcgcagatgaagatgatgggtgacaactcccccaccgggctcagc
cacctcgcccatcaacgtcgagagcagcttctgcgacaaggccatcgttcgtccccaagg
ccgaagggtcgatggcgggcggcgcggcggacggcgacgcttcggcctacgacgacgacg
atggccgcggcggcggcggcggcggctcgttggaagacggccgcccgtccggcgcgagcg
cggcgcgcggcgagaacggcgacggcctctcggccgaggcgacgacctccgactacgtcc
ggccgaagacggaggacgaggcggcgtttcagccgacgacgccggcgctcggcagcgaga
gcggacggcggcgacggcgtctcgtcgtcggggccggtgagccccggcctgagcctctcg
acgacgctggacttcgagatgaacgactacagcgagacgtcgagcctggccgacccgcgc
accccgagcccgctgggcggcctcgccttctcgcagtccaagctgtcgtcgtcgtccgac
gaccgcccgggccacaagcgctaccgcacccagatgtccaacctgcagctgaaggtgctc
aaggcctgcttcggggagtaccgcacgcccaccatgcacgagtgcgagatcctaggcaac
gacatcgggctgcccaagcgcgtcgtgcaggtgtggttccagaacgcgcgcgccaaggac
aagaagttcaagctgagcgtcgccaagcagttcggcgcggatgccgccggccgcggcggc
cggcgggagggcgcggcgccacgggggggtcgctgcggcctgtgcggcgttcagtacacg
gcgcgactctctgtgcgcgaccacgtcttctcgctgcagcacatcggcaagctcaaggag
agcctcggcagccagctggacggcgagaagttcctcgacccggcgctcttccgccagttc
atggcgcagcaggagctcgaccgcatcaagaaggccaatgagagcatcggcctcggactt
cccccagcagcagcagcagcagcagccaattcaagtcacgaagcaccctgccacgttcca
aacgggccccaagtgccgggcctgggcctctcgtcggcctactcggccgttcccgggctc
tcgccgatgctcatcccgggcgttgggggctccccggcgctgcccaactttgggccgtct
ccagcagcgatgacgacgccccaaagcggcgctcatcggcttcccgatgtcggcgatccc
ccgccgggtgtcaccgcgcccgccgcgggtccccagcaaatcaccgcagcagcagcagca
gcagcagaacgccggcacggctgtcgcagtcgccgggcaaggagaggagccaagatgccg
ccggcagcgacgaccaggacgccgacgagcggcagaaatccgacgccgcgacgaagcgcg
aggaggcgggacgcggccgctcagcaggcgcgggccgaccatgcccagcctgcaggccct
gcaggccgcgctggccggcgagtcgaacgcgacggcggcggccgccctcctcgccgggca
gctgctgccctgcttcggctgcccacgctgccgccgtacttcaacgggccgcagctgccc
acggcggcggcggccgcggccgtgctgcagggcggctacctccagtcgctgtacggggtg
gacgcctcgggcctcttcccctacggcccggccttcgcgcaggccgccctcgccaacggg
ctggcggccggctcgctgctgcagcagcaggtgcagcagtatcagcagaacgtgcaagag
gtgctgcagcagcagcagcagcagcagcagcagatgacgcaggcggcgcagccgtcgaac
ggctccgtgcagggtcagcacgacaggggcggccggagtgcgaaggaggcgggcgacggg
gccgacgagggggccgggccgccgggcaaaggcaagggggcggccgcggacgccccgacc
aagcagggcctggcggagcactgcgagatgaagtgcagcctcgtgtgccgcaagtgccag
atggtgttctccgacgagacgctggcgctcgcccaccagaagtcgctctgctacttcggc
ctgggcaaggtggacgcgcgggagaccctggtgcgcgtgccgtccggccagtaccagtgc
aaggcctgcgacgtgaccctgctcggggaagacggcctgcgacgccacctccagtcgtcc
tcgcaccggcagcaggtcgcggccaaacgagctacgtccgacgccaaagagcagcagcag
cagcagcagcagcacgctagactattattacctcactcctttcgcgccactgatgccgca
tctacctcgcagcagcagcagcagcagcagcagcagcagcccgtgccggatgatggcggc
ggcttctcggcagccggctcctcgtgcgccgctcccgtcgcctgcgccaaatcgtggccg
ccgttcgccacgcccgtgacgccgccgtccctcccgcagacgcgcttcttgcccgccctc
gtcacggcctccctggcgaactcggccgccgtggcggcgtcggccgggatggacgcgcag
gtgccggcggcggcggcggcggcgtcgccccagccgccggtttcgctgagcgggcgctcg
ggcgacgcggaccagggcggcaaggcgacgtcgctggcgagcgagcgcgccatcgcggcg
tacggcatgatctccgagcgcgagtcgcagagcgtgggctcgtag
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integrated database retrieval system
