Paenibacillus mucilaginosus KNP414: KNP414_00548
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Entry
KNP414_00548 CDS
T01550
Symbol
ddlB
Name
(GenBank) DdlB
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pms
Paenibacillus mucilaginosus KNP414
Pathway
pms00470
D-Amino acid metabolism
pms00550
Peptidoglycan biosynthesis
pms01100
Metabolic pathways
pms01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pms00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KNP414_00548 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KNP414_00548 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KNP414_00548 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pms01011
]
KNP414_00548 (ddlB)
Enzymes [BR:
pms01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
KNP414_00548 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pms01011
]
Precursor biosynthesis
Amino acid ligase
KNP414_00548 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_3
ATP-grasp_4
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AEI39173
UniProt:
F8FQ31
LinkDB
All DBs
Position
572526..573734
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AA seq
402 aa
AA seq
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MHCFFFLISGTTDFINRRVLMSKIRVGLIYGGKSGEHEVSLQTALAVTKALDLSKYEVQP
FYITKEGDWRSGPQLTAPADSVDALTFGSASSSNETGTFALQPLFGSSAAAKASGNPAVS
GSESGAAAGPLDVVLPLLHGTFGEDGTVQGLLEMANIAYVGTGVLASAVGMDKVMMKKVF
AQEGLPQCVFRHFTKSQWEKDNAFFIMEIEVAIGYPCFVKPANLGSSVGINKARNRDELL
SAIAEAFRYDRKVIVEEFIDARELEVAVLGNDEPQASVVGEIVSSGEFYDYKAKYIDGKS
SMIIPAEIDSEQASRIRDLAVRAFQSIDGTGLSRVDFFLRKDNGEIYINEINTMPGFTPF
SMYPLLWRESGKPYSELLDDLVRLAIQRHEEKQRLQYSFDLT
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcttcttctttctgatctcagggacgacagacttcattaaccggagggtactt
atgagcaaaattcgcgtaggcctgatatacggaggcaaatccggagaacatgaagtgtct
ctccagaccgctcttgccgttaccaaggcacttgacttgagcaaatatgaggttcagcct
ttttacataaccaaagagggagactggcgctccggcccccagcttacggcacccgcagat
tcggtggatgccctcaccttcgggtcggcttcttcttcgaacgaaaccggcacgtttgcc
cttcagccgctgttcggttcatccgctgcggccaaggcttccggtaacccggcggtttcc
gggtctgagagcggagccgctgccggaccgcttgatgtagtgcttccgctgcttcacggc
accttcggtgaagacggaaccgttcagggtcttttggagatggccaatatcgcgtatgtc
ggaacgggcgttctggcctccgccgtcggcatggataaggtcatgatgaaaaaggtattt
gcccaggaaggtcttccgcagtgcgtattccgccatttcacgaaaagccagtgggagaag
gacaacgcgttctttattatggaaattgaagtggccatcggctatccgtgctttgtcaaa
ccggcgaacctgggctccagtgtcgggatcaacaaggcgcgcaaccgcgatgagcttctg
tcggccattgcggaagcgttccgctacgaccgcaaggtcattgtggaagagttcatcgat
gcccgggagctggaagtggctgtgctcggcaatgacgagcctcaggcttcggtggtcggg
gagattgtttcatccggcgaattctacgactataaggccaagtatatcgacggcaagtcc
tcgatgattattcctgcggagattgattccgagcaggcttcccggattcgtgatctggcg
gtccgtgcgttccaatcgattgacggcaccggtttgtcccgtgtggacttcttcctgcgc
aaggacaacggcgaaatctacattaatgaaatcaatacgatgcccggctttactccattc
agtatgtatccgctgctctggagagagtccggcaagccttacagcgagcttctcgacgat
ctggtccgtctggcgatccagcgtcatgaggagaagcagcgcctgcagtattcctttgac
ctgacatag
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