Prochlorococcus marinus MIT 9313: PMT_2158
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Entry
PMT_2158 CDS
T00143
Name
(GenBank) SNF2 related domain:DEAD/DEAH box helicase
Organism
pmt
Prochlorococcus marinus MIT 9313
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
AAA_22
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
CAE22332
CyanoBase:
PMT2158
UniProt:
Q7TUJ6
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All DBs
Position
2279486..2282785
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AA seq
1099 aa
AA seq
DB search
MIGCGTPAWMVAVDRQCTPAPRNPTHTFCVAAMSLLHATWLPAIRTPTSSGRPALLVWAD
TWRVATPAGPAATPALHPFTLSPDDLRAWLIERDLLPDEIIDATACLTLPSRTVKPRNKT
KNVSTESDEAKDNKTSWTGLPLQAGEPIPKQTEWWPWQVQGLAVEPAAATAWLSKLPLSG
NHPDLADELRWWSHLQRWALSMIARGRWLPQVELSKGEGYPHRARWTPLLNREDDRRRLE
DLAAQLPLVATCALPWREPTGRRSNRMTRLRPEAMRAANPVASCRPRSGRLRVASLLEEL
LDAQLRTGFEASEQGLDPLLTAWQEALGSDSGVINLPDEEAERLATASNHWREGVAGNVA
PARACLELFTPGEGEDLWELRFSLQAEADPTIKVPAAAAWAAGPKVLQLGEIRVEHPGEV
LLEGMGRALTVFAPIERGLDSATPEAMQLTPAEAFVLVRTAATQLRDVGVGVELPASLSG
GLASRLGLAIKAELSERSRGFTLGETLDWSWELMIGGVTLTLRELERLASKRSPLVNHKG
AWIELRPNDLKHAEHFCSVNPGISLDDALRLTATDGDTLMRLPVHRFEAGPRLQAVLEQY
HQQKAPDPLPAPEGFCGQLRPYQERGLGWLAFLHRFDQGACLADDMGLGKTIQLLAFLQH
LKAEQELKRPVLLIAPTSVLTNWKREALAFTPELNVREHYGPRRPSTPAALKKALKGLDL
VLTSYGLLQRDSELLETVDWQGVVIDEAQAIKNPNAKQSQAARDMGRPDKNNRFRIALTG
TPVENRVSELWALMDFLNPRVLGEEDFFRQRYRLPIERYGDMSSLRDLKGRVGPFILRRL
KTDKAIISDLPEKVELSEWVGLSKEQAALYRNTVDETLEAIARAPRGQRHGKVLGLLTRL
KQICNHPALALKEQTVAKGFMDRSAKLLRLEEILEEVIEAGDRALLFTQFAEWGHLLKAY
LQQRWRFEVPFLHGSTSKTERQAMVDRFQEDPRGPQLFLLSLKAGGVGLNLTRASHVFHV
DRWWNPAVENQATDRAYRIGQTSRVMVHKFITSGSVEEKIDRMIREKSRLAEDIIGSGED
WLGGLGVSQLRELVALEDS
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgattggttgtggaactcctgcgtggatggttgccgttgatcggcagtgcactcctgct
ccaagaaacccaacacatactttttgcgtcgcggccatgagcctgctgcacgccacctgg
cttccagccatccgtactccgaccagctccggtcgccctgcgctccttgtgtgggcagat
acctggcgagtcgctaccccagcaggaccagcagcaactcccgcactccaccccttcacc
ctcagcccagacgatctacgtgcctggctcattgagcgcgatctactgcctgatgaaatc
atcgacgccacagcatgtctgaccctgcctagccgaacagtcaaaccgcgcaacaaaacc
aagaacgtatccactgaatccgacgaagccaaagacaacaaaacaagttggacaggactg
cccttacaagcaggcgaacccattcccaaacaaacagaatggtggccctggcaggtgcaa
ggcctggcagtggaacctgctgccgcaacggcctggctttcgaaactgcctctttcagga
aatcatcctgatctggccgatgaattgcgctggtggagccatctacagcgctgggccctg
agcatgattgctcgcggacgttggctaccccaggtggaactcagcaagggagagggctat
ccccaccgagcacgctggacaccgctactcaaccgtgaagatgatcgccgccgcctcgaa
gaccttgccgctcagcttcccttagtggccacctgcgccctcccctggcgggagcccacc
ggaaggcgtagcaaccgaatgacccgcctaagaccagaggcgatgcgagccgctaaccct
gtggcttcatgccgaccccgcagcggtcgccttcgcgtagccagcttgctggaagaactc
ttggatgcccaactgcgcaccggatttgaagcgagtgagcaaggcctagacccattgctc
acagcctggcaggaagcactggggtccgacagcggcgtgatcaacctccccgatgaggaa
gccgaacgtctagctacagcaagcaaccattggcgtgaaggcgtggctggcaacgtcgca
ccagccagagcctgcttagaactcttcactcccggagaaggggaagacctctgggagctg
cgcttctccttacaggctgaggctgatcccacaatcaaagtaccggccgcagcagcctgg
gcagctggtcccaaggtgttgcaactaggcgaaatccgtgtggaacatccaggcgaggtg
ctactggaaggcatggggcgagccctcacggtgtttgcaccgatcgaacgaggcctcgac
agcgccacaccagaagcaatgcagctcacccctgctgaagcctttgtattggtgcgcact
gcagcgacccaactgcgtgatgttggcgttggcgtggaattgcctgccagcctctcggga
gggctggccagtcgcctaggcctagcgatcaaggcggagctatcggagagatctagaggt
ttcactctgggcgaaaccctcgactggagttgggagctcatgatcggtggcgtcaccctg
acgcttcgcgaactggagcgactagcaagcaagcgcagcccgcttgtcaaccacaagggc
gcctggatcgaattacgccccaacgatctcaaacatgcggaacacttctgcagcgtcaat
ccaggcatcagcctcgacgatgccttgcgccttaccgcaacagatggcgacacgctgatg
agactgcccgttcaccgctttgaggccggtccacgactacaggcggtgttggagcagtac
caccagcaaaaagcaccagaccccctacctgctcccgaaggcttctgcggtcagctaagg
ccttatcaggaaaggggtctgggttggctggccttcctgcatcgcttcgatcaaggggca
tgcctggccgacgacatgggccttggcaaaacgatccagctactggcattcctgcaacat
ctcaaggcggaacaggaactcaaacggccggtattgcttatcgctcccacgtccgtactc
accaactggaagagagaggcgttggccttcacaccagagttaaacgtccgcgaacactat
gggccgcgtcggccctctacccccgccgccttaaagaaagcactcaaaggcttagacctc
gttctcaccagttatgggctcctgcagcgagatagtgagctcctggaaacggtcgactgg
caaggcgtggtcatcgatgaagcccaagccattaagaaccccaacgccaaacagagccaa
gcagcacgcgatatgggccgcccagacaaaaacaatcgcttcaggattgctcttaccggc
acacccgtcgaaaaccgagtaagtgaactttgggcactaatggacttccttaacccaagg
gttctcggtgaagaagacttcttccgccagcgctaccggctgccgattgagcgctatggc
gacatgtcttccctgcgagacctcaagggccgtgttggtcccttcatcctgagacgactc
aaaaccgacaaggcaatcatctccgacctacccgaaaaagtagagctgagcgaatgggtg
gggctgagcaaagaacaggcagccctctatcgcaacacagtggatgaaacactggaggcc
attgcccgcgcacccaggggtcaacgccatggcaaggtgctcggattgcttaccagactg
aagcaaatctgcaaccatcccgccctagccctcaaagaacaaaccgttgcaaaagggttc
atggaccgctccgccaagctgctgcgtttggaagaaattctcgaagaagtaatcgaggca
ggagatcgcgctctgttattcacccaattcgcagaatggggtcatctccttaaggcctac
ctgcaacaacgctggcgctttgaagttcccttcctgcacggcagcacaagcaaaactgaa
cgtcaggccatggttgatcgcttccaggaggatccacgtggaccccaactgttcctgctg
tcactcaaagccggtggtgtaggcctcaacctgacgcgggctagccatgtgtttcatgtt
gatcgctggtggaatcctgccgtagaaaaccaggccactgatcgcgcttacaggatcggg
caaaccagtcgggtgatggtgcacaaattcatcaccagcggctcagttgaagagaaaatt
gatcgcatgattcgtgaaaaatctcgacttgccgaagacatcattggctctggagaagac
tggttaggtggcttaggcgtcagtcaattgcgcgaactagtggccctagaagacagctga
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