Podarcis muralis (common wall lizard): 114582334
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Entry
114582334 CDS
T06059
Symbol
ACIN1
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03013
Nucleocytoplasmic transport
pmua03015
mRNA surveillance pathway
pmua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114582334 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
114582334 (ACIN1)
03015 mRNA surveillance pathway
114582334 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114582334 (ACIN1)
03041 Spliceosome [BR:
pmua03041
]
114582334 (ACIN1)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114582334 (ACIN1)
Spliceosome [BR:
pmua03041
]
Complex C
Other components
EJC/TREX
114582334 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
114582334
NCBI-ProteinID:
XP_028559109
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All DBs
Position
13:complement(49263052..49299246)
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AA seq
1242 aa
AA seq
DB search
MADGEEVTLDGRPLQALRVADLKAALEQRGLAKSGQKSALIKRLRGALMLENLQKHSTPH
TTFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAADSESKSCIVSREREESDE
EGPRRPEQHPTRVRQARAVKTPGAAHAPSSEERETPLRSRRAAQRAPVKEEEEEEDEDDE
EDDDEDDEEEEEEAAALPAKQTPKGQAEPGAPAPLEKGACQPSLPIAPQAQPKEATAQTP
DAPVCGAAVPLLPPSKGLAEAEPAAPECGEEQPATVTQEGPQEEKRGPEMPGPPEEAEPV
EAAAQLPEALKAEVAKEAGPCPEERGPTAPREAQGEQGVGLRGWGAPAAPLQPQQVVAEE
IQREEDQKEAAEALKTLEEETAAAAAALVQDSPSPPQLTEAQHTQQDEGGEEPPPPLLTK
EAPGPSPPEDEEAPPQLSQPSPPAQEVPAAAASPGPRRNGPAPRHPPCSARGKGPRAPAP
PGLPPPRPAPPGPALAAARSLAPVPGGPAPAPPSRPPGSGGPRGPHPALAPSGTAAPAPG
LAPGRGPGRLPAAAAAESPVALKPQGTVAATPTPKRPPRQGRAPHATAPRPSKMGSSPRE
KRRNTLPLPSEPQRHPSHGQEQEQQEEEEEMEMTVPERGSPEPPTPMEASGLDTGVPASE
PHRPSEQRHSENEEKQEVPMEPSEPRPESEAPEPGPEEHPSAEPPGPDPGPEDEEKKEGS
TQPKAFKRKISVVSSSVAKGTAAATNSDTEGSQPGGRKRRWGASTAATQKKPSISITTES
LKSLIPEIKPPTGGQEAVVDLHADDSRISEDEAERHPEEPPHEKALKICRTVTQVVPAEG
QENGQGEEEEEEEKAHEEEPPEAPPAVAVEAVVLPPPVEHEVKKVTLSDTLTRRSISQQR
SGVSITIDDPVRTAQVPSPPRGKVSSIVHICNLVRPFTLGQLKELLGRTGTLVEEAFWID
KIKSHCYVTYSTVEEAVATRNALHGVKWPQSNPKFLSADFAEQDELDFHRGLLAERPAEA
KADEXSRSPRGGPGHAGEREMSRRSEAREREAVVREQWAEREREMERRERTRAEREWDRD
KVREGPRSRSRSRERRRKERPKSKEKKAEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLP
LTDTQYVQKQAERAARARERERRRKEQEAEEARQRERSRQAEREKRREHSRERERERPNA
TGGGASRGGERSGRDRERREAKARHSRSRSRSTPAQDRGGRR
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggggaggaggttactctggacgggaggccgctccaggcgttgagggtcgcc
gacctgaaggcggctctggagcagcgcggcctggcgaagagcgggcagaagagcgcgttg
atcaagcgcctccgcggggccctgatgctcgaaaacctccagaagcactcaacccctcac
accaccttccaacccaattcccagattggcgaggagatgagtcaaaacagcttcatcaaa
cagtacctggagaagcagcaggagttgctgaggcaacgtctggaacgggaagcacgggaa
gctgcggattcagagagcaaaagctgcattgtgtcacgggagagggaagaatctgatgaa
gaagggcccagaagaccggagcagcacccgacccgggtcaggcaggccagagctgtaaag
accccgggagccgcccatgccccaagcagcgaagagcgagagacgcctctcaggagtcgg
agggcagcccagagggctcctgtgaaagaggaggaggaagaggaggatgaggacgacgaa
gaggacgacgacgaggacgacgaggaggaggaagaagaagctgccgcgttgccagccaaa
cagacgccgaaggggcaggctgagcccggcgccccagctcccctggagaagggcgcatgc
cagccttccctgcccattgccccacaggcccagccaaaagaggccacggcccaaaccccg
gacgccccagtttgcggagcggccgtgccacttctcccaccctcaaagggcctagcagag
gctgaacccgcagccccagagtgcggggaagagcagccagcaactgtgacgcaggagggg
ccccaggaggaaaagaggggccctgagatgccagggcctccagaagaggcagagcctgtc
gaggccgcagcccagctacccgaagccttaaaggcggaggtggccaaagaagcagggcct
tgcccggaggagagagggccgactgccccccgcgaggcacaaggggagcagggggtgggc
ctgcgggggtggggggcccctgctgcccctctgcagccccagcaggtggtggcagaggag
atccagagagaagaggatcagaaggaagcagccgaggccctgaagactctggaggaagag
acagcagctgccgccgccgccctggtccaggactccccttcccctccgcagctgacggaa
gcacaacacacccaacaggacgaggggggcgaggagccccctccccctctcttgaccaag
gaggcccccgggcccagccctccagaagacgaagaggccccccctcagctctctcagcca
tctccccccgctcaggaagtcccagccgcagccgccagccctggcccccggaggaacggc
ccggccccccgccatcccccctgcagcgcccgcgggaaaggcccgcgggctccagctcct
cccggtcttcctcctccgcgtccagctcctccaggtcccgctctcgcggcagctcgcagc
ctcgctcccgtgccaggaggccccgctccggctcctccgagtcgcccgccaggaagcggc
gggcctcggggtccccatcccgctctggctccgagcggcacagcagctcctgctccaggt
ctcgctccaggtcgcggtcccggtcgccttccagcagcggcagcagcagaaagtcccgta
gccctgaagcctcaagggacggtagcagctacccccacaccaaagagacctccccgacag
gggagagccccccacgccacagcccccagacccagcaagatgggttcaagcccaagggaa
aagcgaagaaacacccttcccctgccttcggagccccagagacaccccagccatggccag
gagcaggaacagcaggaagaggaggaggagatggagatgacagttccagagcgaggcagc
ccagagccccccactccaatggaggccagtggccttgacaccggggtccctgcctcggag
ccgcaccgcccgtccgaacagcggcacagcgaaaatgaggagaagcaagaggtgcccatg
gagccgtccgagccccgaccagagagcgaggcccccgagcctggccctgaagaacacccc
tccgcggagccccccggacccgacccgggccccgaagacgaggagaagaaagagggttca
actcagcccaaggccttcaagaggaagatatctgttgtctcgtcatcggtggccaagggc
acagcggcagcgacaaacagtgacacagagggaagccagccgggaggccggaagcggcgc
tggggggccagcacagccgccacgcagaagaaaccttccatcagcatcaccacagagtcc
ctcaagagcctgatccctgagatcaagcccccgacgggagggcaggaggcagtggtggac
ctgcacgccgacgactcgcgcatctccgaagatgaggccgagcggcacccggaggagccc
ccccacgagaaagccctcaagatctgccgcaccgtcacgcaggtggtgccggctgaaggc
caagagaacggccagggagaggaggaggaagaggaggagaaggcgcacgaggaagagccg
cccgaggcccctcccgccgtcgccgtagaggcagtcgtgctgccaccacccgtggagcac
gaagtgaagaaagttacgctgagcgacactctgacgcggcgctccatcagccagcagcgc
tccggcgtctccatcaccatcgacgaccctgtccgcacagcccaggtcccctctccgccc
cgcggcaaggtcagcagcatcgtccacatctgcaacctggtgagacccttcactctcggg
cagctgaaggagctgctgggccggacaggcaccctcgtggaggaagccttctggatcgac
aagatcaagtcccactgctacgtcacgtattcaacagtggaagaagcggtagcaactcgc
aacgccctccatggtgtcaagtggccacaatcaaatcccaaatttttatcagcagacttt
gcagagcaagatgagctggatttccaccggggcctgctggccgagcgtcccgcagaagcc
aaggcggacgagngctctcgctctccccggggtgggcctgggcatgcgggggagcgcgag
atgtcgcggcgctcggaggcacgagagcgggaggcggtggtccgggagcagtgggccgag
agggagagagagatggagcgccgggagaggacgagggccgagcgggagtgggaccgggac
aaggtgcgcgaggggccccgctctcggtcccgatcccgggagagacgccgcaaggagcgc
cccaagtctaaggagaagaaagccgagaagaaggaaaaggcccaggaagagccccccgct
aaactgctggacgaccttttccgcaaaaccaaggcagccccctgcatttactggcttcct
ttgacagacacccagtacgttcagaagcaggccgagcgggcggccagggcccgggagcga
gagcgccggcgcaaggagcaggaggcggaggaagcccgccagcgggagcgcagccgccaa
gccgagcgggagaagaggcgggagcacagccgggagcgcgaacgggagcgccccaacgcc
acaggaggcggggccagcagggggggcgagcggagtggccgggaccgcgagcggcgcgag
gcaaaggcccgccatagtcggagccggagtcgcagcacgcctgcacaggacagggggggg
cgccgctga
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