Podarcis muralis (common wall lizard): 114583998
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Entry
114583998 CDS
T06059
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114583998 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114583998 (GSPT1)
03012 Translation factors [BR:
pmua03012
]
114583998 (GSPT1)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114583998 (GSPT1)
Translation factors [BR:
pmua03012
]
Eukaryotic type
Release factors
114583998 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
114583998
NCBI-ProteinID:
XP_028561247
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All DBs
Position
14:39464644..39500896
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AA seq
653 aa
AA seq
DB search
MEANGSSGSSSDSAPDCWDQADIEPGAGPAGSSAPGAAAADVPSPAQLDAASAEQQEELL
GAAFSRHLNVNAKPFVPNVHAAEFVPAFLRGGPGPASSSSPSSSSTSSAPAQGLPPPPSP
PPGLPPLTSLPHGASAESSQEEQPSPCEGSNAAVSMEISEPVENGETEMSPEESWDHKEE
AIEPELASGPSGDAGPTEEGTPEMMEEEEELPKPKSMIAPPGAPKKEHVNVVFIGHVDAG
KSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAY
FETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAML
AKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTG
ANLKEQSDFCPWYIGLPFIPYLDNLPNFNRPVDGPIRLPIVDKYKDMGTVVLGKLESGSI
CKGQQLVMMPNKHNVEVLGILSDDVETESVAPGENLKIRLKGIEEEEILPGFILCDLNNL
CHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRF
VKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaacggcagcagcggcagcagcagcgactcggcgcccgactgctgggaccag
gcggatatcgagcccggcgctggcccggccggctcctccgcccccggcgctgccgccgcc
gacgtgcccagcccggcccagctcgacgccgcctcggcggagcagcaggaggagctgctg
ggcgcggccttcagccggcacctcaacgtcaacgccaagcccttcgtgcccaatgtccac
gccgccgagttcgtgccggccttcctgaggggaggcccaggcccggcctcctcgtcgtcg
ccttcctcctcctccacgtcctccgcgcccgcgcagggactcccgccgccgccttcgccc
ccgccgggcctgccgcccctgacgtcgctgccacacggggcatcagcagaatcttcacaa
gaggaacagccgtcaccttgtgaagggtcaaatgctgcagtcagtatggaaatctcagaa
ccagttgaaaacggagaaacggaaatgtcccctgaagaatcatgggatcacaaagaagaa
gctattgaacctgagttagcaagtggaccttctggagatgcaggacctaccgaggaaggc
accccggaaatgatggaggaggaagaggaactaccaaaacctaaatctatgattgcacca
ccaggtgctcccaaaaaagaacatgtaaatgtagtattcattggacatgtagatgctggc
aaatcaacaattggaggacaaataatgtacttgacaggcatggttgataaaagaacactt
gaaaaatatgaaagagaagctaaagaaaaaaacagagaaacctggtacctctcctgggcc
ttggacacaaaccaggaagaaagagacaaaggtaaaacagtggaagtgggccgtgcctat
ttcgaaacggagaagaaacacttcacaattttagacgctccagggcataagagctttgtc
ccaaatatgattggtggtgcttctcaagctgatctagctgtgttggttatctctgcaagg
aaaggagagtttgaaactggttttgagaaagggggacaaacgagagagcatgccatgtta
gccaaaactgcaggcgtaaaacatttaatagttcttattaataaaatggatgatccaact
gtgaactggagcaatgaaaggtatgaggaatgtaaagagaaattggtgccattcttgaag
aaagttggcttcaatccgaaaaaagatattcacttcatgccctgctctggattgactggg
gcaaacctcaaggaacaatcggacttctgtccttggtatattgggctaccgtttattcca
tatctggataacttgccaaatttcaacagaccggttgatggaccaatcaggctgccaatt
gttgataaatataaggatatgggcacggtagttctgggaaagctggaatcaggctctatc
tgcaaaggacagcagcttgtgatgatgccaaacaagcataatgtggaagtccttgggatc
ctttccgatgatgtagaaactgaatcagtagctccaggtgaaaatctgaagattcgactg
aaaggaattgaagaggaggagatcctcccagggtttatactctgtgatcttaataacctg
tgtcattcaggacgcacttttgatgctcagatagtgataattgagcataaatccatcatc
tgcccaggttacaatgcggtgctgcatattcatacctgtattgaagaagttgagatcaca
gccttaatctgtctggtagacaaaaaatcaggagagaaaagcaagacacggccccgtttt
gttaaacaagatcaagtatgtattgcccgtttaaggacggcaggaactatctgccttgag
acattcaaagacttccctcagatgggtcgattcaccttaagagatgagggtaagaccatt
gcaattggaaaagttctgaaattggttccagagaaggattaa
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