KEGG   Podarcis muralis (common wall lizard): 114588784
Entry
114588784         CDS       T06059                                 
Name
(RefSeq) THO complex subunit 2
  KO
K12879  THO complex subunit 2
Organism
pmua  Podarcis muralis (common wall lizard)
Pathway
pmua03013  Nucleocytoplasmic transport
pmua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114588784
  09122 Translation
   03013 Nucleocytoplasmic transport
    114588784
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmua03019]
    114588784
   03041 Spliceosome [BR:pmua03041]
    114588784
Messenger RNA biogenesis [BR:pmua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     114588784
Spliceosome [BR:pmua03041]
 Complex C
  Other components
   EJC/TREX
    114588784
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114588784
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 114588784
NCBI-ProteinID: XP_028570087
LinkDB
Position
Z:38514239..38570555
AA seq 1700 aa
MVYWPAGPLRPSRRSPALPLRLVRAMPPRKPRFSRPQKHPLPPPPRRRPRPPPPPSPPTF
PSCSSWPPPPSPLTSGPPFSHPGFRHYTRKMAAGAAASAVASTSGASTPAALPAEWIKNW
DKSGKIEFLQLCRNLSENVTFRGIQQALYELAYHVVKGNLKHDQASSVFNDVIEFRDDMP
SILADVFCILDIETSCLEEKSKRDQFMQLVSACLYLVSDTILKERLDPETLESLGLIKQS
QQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSELILENIKSLIG
CFNLDPNRVLDIILEVYECRPEYDEFFVPLIESYMYMCEPQTLCHILGFKFKFYQEPNGE
TPVSLYRVAAVLLQSNLIDLEDLYVHLLPADNTIIEEHKREIGEAKLIVRKLTVVVLSSE
KTEEKEKEKEKEEEKTEKPPDNQKLGLLEAMLKIGDWQHAQNIMDQMPPFYATSHKPIAV
ALCQLLHVMIEPLYRRVGVPKGAKGTPILPLQNKRAPKQVESFEDLRKEVINMLCYLGPH
LSHDPILFAKVVRLGKAFMKEHQADAGKQEEKEKMELLFSCLLSITDQVLLPSLSLMDCN
ACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVRVKAQTIDRAKYIMKRLTKENV
KPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALA
NPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKE
VVQKMAGIEITEEMTMDQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALP
LCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTDDYIKRVPSID
VLCNDFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQQKVHKYITACELVMAPVH
DSVISLHIPKVWDDISPQFYATFWSLTMYDLAVPHSSYEREVNKLKVQMKAIDDNPEMPL
NKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLC
IFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGR
FLCCMLDTVTRWHSDRAIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWH
YKLTKASVHCLETGEYTHIRNILIVLIKILPWYPKVLNLGQALERRVHKICQEEKEKRPD
LYALAMGYSGQLKSRKHCMIPENDFHHKDPPTKNAVPTTVQNGPGGAGLTSSLTVNAAKL
EESTAEETDKLLKEKSQGAVKVINKAASATPKLTTSNGSNASNSKVIKEKEEKEKCGKEK
DKEKKEKTPAATPEAKTPGKDGKDKPKEERVNKEDKARDSKEKTPKSDKEKEKNKREEKS
SKDEKSKIIVTNAESKSAAEKEKEKEPSREREVTKDVKSKENIRGGGGGGEKAPVAGSLK
SPVPRSEASECEREQKRRKVDTHSSPSHSSTVKDNLSELKDSSAKHYINHSTPTLSKSKE
REVDKKDLDKSRERSREREKKEEKERKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKH
SKSESPSDSPHSNEKEKDKSKSKSSGKEKGDSIKVEKMEKSSGSKKESRHDKEKTEKKEK
RDSTGGKEEKKHHKSSDKHR
NT seq 5103 nt   +upstreamnt  +downstreamnt
atggtctactggcctgctggccctctccgtccctcccggcggagccccgcgctgcccctg
cgcctagtccgcgccatgccgccaaggaagcccaggttctcccgccctcaaaagcatcct
ctccctcctcctccccgtcgtcgtcctcgtcctcctcctcctccatcgccgcccactttc
ccgtcatgctcgtcatggccgcccccaccgtcccctctgacctcgggcccgccgttctcg
catccgggctttcggcactacaccaggaagatggcggcgggagcggcggcctcagcggtg
gcatcgacatcgggggcatccacgccggcggcgctccctgccgagtggatcaagaactgg
gacaaatcgggcaagatcgaattcttgcagctttgccgtaatctgtctgaaaatgtaact
ttcagaggtatccagcaggctttatatgagcttgcataccatgttgtcaagggaaaccta
aagcacgatcaagcttccagtgtttttaatgatgtaatagaatttcgtgatgacatgcct
tccattctagcagatgtattttgcattttagatattgaaactagttgcttagaagaaaaa
agcaagagggatcagttcatgcagttggtgtcagcatgtttgtacttggtttcagatact
atactaaaagaacgtctggacccagaaacattagaatcattagggctcatcaagcagtct
cagcagtttaatcagaaatctgtgaaaatcaagacaaaacttttttataagcaacagaaa
ttcaatttattaagagaagagaatgaaggttatgcaaaactgattgctgaactgggccaa
gatttatctggcaatatcactagtgaactgatcttagaaaatatcaaatctttaataggt
tgtttcaaccttgatcccaatagagtgttggatattattttagaagtctatgaatgcagg
ccagagtatgatgaattctttgtacctttgatagaatcttacatgtacatgtgtgaacct
caaacactctgccatatccttggattcaaatttaagttttatcaggagccaaatggagag
acacctgtttctttgtatagagttgctgcagtacttttgcaaagcaatctgatagatttg
gaagacctttatgtccatcttcttccagcagacaacactattattgaagaacataaacga
gaaatcggagaagccaaactaattgtgaggaagctcacagtggttgtattgtcttccgaa
aagactgaagagaaagagaaggaaaaggaaaaggaagaggagaaaacagaaaaaccacct
gataaccagaaactgggcttattagaagcaatgttaaaaattggcgactggcaacatgca
caaaacattatggatcagatgcctccattttatgcaacttcacacaaacctattgctgtt
gctctttgtcagcttcttcatgtgatgattgaacctctctaccgaagggttggagtaccc
aaaggtgccaaagggacaccaattcttccactgcaaaacaagagagcacccaagcaagta
gaaagttttgaagatttaagaaaggaagtgatcaacatgctttgttaccttggcccacat
ctctctcatgaccccatattgtttgcaaaagtagtgcgtcttggaaaagcatttatgaaa
gagcaccaagcagatgcaggcaagcaagaggaaaaagagaaaatggagttattattcagc
tgtttgctgagtattaccgaccaggttttgcttccttctctttctttgatggattgtaat
gcatgcatgtctgaggaactctgggggatgtttaaaacatttccataccagtatcggtat
cgcctctatgggcagtggaagaatgaaacatacaatagtcatccactactggtgagagtt
aaagctcagacaattgaccgagccaaatacattatgaagcgtctaaccaaggaaaacgta
aagccatctggaagacaaataggaaaactgagccacagcaacccaaccattttatttgat
tatattttgtctcagatacagaagtatgataatttaatcacccccgttgtcgactcgttg
aaatacctcacttccttgaactatgatgtcttggcatattgcataattgaagcactggct
aatcctgagaaggagaggatgaaacacgatgacaccacaatctccagttggcttcaaagt
ttagctagcttctgtggtgctgtttttcgaaaataccctatagaactagctggtctactt
cagtatgtggcaaaccagctaaaggctgggaaaagctttgacctgcttattttgaaagag
gtggtacaaaaaatggctggaatagaaatcactgaagagatgacaatggaccagctagag
gccatgactggtggagagcagctgaaagcagagggtggatattttgggcaaatcagaaac
actaagaaatcttcccagagattaaaagatgcacttttggaccacgatcttgctcttcca
ttgtgccttctcatggctcaacagagaaatggagtgatatttcaagaaggaggcgagaaa
catttgaagctggtgggaaaactctatgatcagtgccacgatactctggtacaattcggt
ggatttttggcttccaatttaagcacagatgattatattaagcgagtgccttccattgat
gttctctgtaatgacttccacacccctcacgatgctgcatttttcctttcacggcctatg
tatgcacatcacatttcatcaaaatatgatgaattgaaaaaggctgagaaagggaacaaa
cagcagcagaaagttcacaaatacattacagcgtgtgagcttgtgatggcccctgttcat
gactcggtgatctccttgcacatcccaaaggtctgggatgatatcagtccacagttctat
gctacgttctggtcactgacaatgtatgaccttgctgtgccacatagtagctacgaacgg
gaagtcaacaaactcaaagtccagatgaaagctattgatgacaatccggaaatgcctctg
aacaaaaagaaaaaagaaaaagaacgctgtacagctcttcaggacaagcttcttgaagag
gaaaagaagcagttagagcacgtgcaaagagtgctgcagagactgaagctggaaaaggat
aattggcttcttgcaaagtccaccaaaaatgagactataacaaaatttctgcagttgtgt
atatttcctcggtgtatcttttctgctattgatgctgtttactgcgctcgctttgtggaa
ctggtgcatcaacagaaaacaccaaacttttcaacacttctttgttatgacagagtattc
tctgatataatctatactgtagccagctgtactgaaaatgaagctagtcgatatgggagg
tttctctgctgcatgcttgatactgtaactcggtggcatagtgatagagccatatatgaa
aaggagtgtggcaactatccgggcttcctcaccatattacgggcaactggttttgatggt
gggaacaaagctgaccagttagattatgaaaattttcggcatgtggtacacaagtggcat
tataagttaaccaaggcatcggtacactgcctggaaaccggcgaatatacacacatcaga
aatatcctgatagtgctgatcaaaatccttccatggtaccccaaagttttgaacttgggc
caggctttggagagaagagtccataagatctgccaagaggagaaagagaagagacctgac
ctatatgcattagcgatgggctattctggacagttgaaaagtagaaaacattgcatgatc
cctgaaaatgatttccaccacaaggatccacccaccaagaatgcagtacctacaacagtc
caaaatgggcccggaggagctgggcttacttcttcactcacagtaaatgcagctaaactg
gaagaaagcacagctgaggagactgataaattattaaaggagaaatctcagggtgctgtt
aaagtgattaataaagctgccagtgcaacaccaaagctgaccacgagcaatgggagcaat
gcttccaacagcaaagttataaaagaaaaagaagagaaagagaaatgcgggaaggaaaaa
gataaggagaaaaaagagaaaactccagctgccactcctgaggccaaaacacctgggaag
gatgggaaagataaaccaaaggaagaaagggtgaacaaagaagacaaagcaagagatagc
aaggaaaagacacctaagtctgataaagagaaggaaaagaacaagagagaagagaagtcg
tcaaaggatgaaaaatccaagatcattgtgaccaatgctgagtcaaagtcagctgcagaa
aaggagaaagagaaggagccgtccagagagagagaagtaaccaaggatgtgaaatccaag
gaaaacattagaggaggaggaggaggaggagagaaggctccagtagctgggtccttgaag
tcacctgttccccgatcagaagcatcagagtgtgaaagggaacaaaaacgtcgcaaagtt
gatacccattcttctccatcacattcctcaacagtaaaggacaacctcagcgaactcaag
gactcttcagcaaagcactacattaaccactcaactccaacactgtccaagagtaaagag
agagaagtggacaagaaagatttggacaagtcaagggaaagatccagagagagagagaag
aaagaggaaaaggaaaggaaagatcgaaaaagggatcattcaaatagtgatcgggaagtg
cctcaggattcaaccaaacgtcgcaaagaggaaaatggaacaactggttcttccaaacat
agtaagagtgaaagtccttcagattctcctcactccaatgagaaggaaaaggacaaaagc
aaatcaaaatcttccggcaaagagaaaggagactcaataaaagttgaaaagatggagaaa
agctctggtagcaaaaaggagtccagacatgataaggagaaaacagagaaaaaagagaaa
cgggatagtactggaggaaaagaagaaaagaaacatcataagtcttcagacaaacacaga
taa

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