Podarcis muralis (common wall lizard): 114588784
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Entry
114588784 CDS
T06059
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03013
Nucleocytoplasmic transport
pmua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114588784
09122 Translation
03013 Nucleocytoplasmic transport
114588784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114588784
03041 Spliceosome [BR:
pmua03041
]
114588784
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114588784
Spliceosome [BR:
pmua03041
]
Complex C
Other components
EJC/TREX
114588784
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114588784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
114588784
NCBI-ProteinID:
XP_028570087
LinkDB
All DBs
Position
Z:38514239..38570555
Genome browser
AA seq
1700 aa
AA seq
DB search
MVYWPAGPLRPSRRSPALPLRLVRAMPPRKPRFSRPQKHPLPPPPRRRPRPPPPPSPPTF
PSCSSWPPPPSPLTSGPPFSHPGFRHYTRKMAAGAAASAVASTSGASTPAALPAEWIKNW
DKSGKIEFLQLCRNLSENVTFRGIQQALYELAYHVVKGNLKHDQASSVFNDVIEFRDDMP
SILADVFCILDIETSCLEEKSKRDQFMQLVSACLYLVSDTILKERLDPETLESLGLIKQS
QQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSELILENIKSLIG
CFNLDPNRVLDIILEVYECRPEYDEFFVPLIESYMYMCEPQTLCHILGFKFKFYQEPNGE
TPVSLYRVAAVLLQSNLIDLEDLYVHLLPADNTIIEEHKREIGEAKLIVRKLTVVVLSSE
KTEEKEKEKEKEEEKTEKPPDNQKLGLLEAMLKIGDWQHAQNIMDQMPPFYATSHKPIAV
ALCQLLHVMIEPLYRRVGVPKGAKGTPILPLQNKRAPKQVESFEDLRKEVINMLCYLGPH
LSHDPILFAKVVRLGKAFMKEHQADAGKQEEKEKMELLFSCLLSITDQVLLPSLSLMDCN
ACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVRVKAQTIDRAKYIMKRLTKENV
KPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALA
NPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKE
VVQKMAGIEITEEMTMDQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALP
LCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTDDYIKRVPSID
VLCNDFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQQKVHKYITACELVMAPVH
DSVISLHIPKVWDDISPQFYATFWSLTMYDLAVPHSSYEREVNKLKVQMKAIDDNPEMPL
NKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLC
IFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGR
FLCCMLDTVTRWHSDRAIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWH
YKLTKASVHCLETGEYTHIRNILIVLIKILPWYPKVLNLGQALERRVHKICQEEKEKRPD
LYALAMGYSGQLKSRKHCMIPENDFHHKDPPTKNAVPTTVQNGPGGAGLTSSLTVNAAKL
EESTAEETDKLLKEKSQGAVKVINKAASATPKLTTSNGSNASNSKVIKEKEEKEKCGKEK
DKEKKEKTPAATPEAKTPGKDGKDKPKEERVNKEDKARDSKEKTPKSDKEKEKNKREEKS
SKDEKSKIIVTNAESKSAAEKEKEKEPSREREVTKDVKSKENIRGGGGGGEKAPVAGSLK
SPVPRSEASECEREQKRRKVDTHSSPSHSSTVKDNLSELKDSSAKHYINHSTPTLSKSKE
REVDKKDLDKSRERSREREKKEEKERKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKH
SKSESPSDSPHSNEKEKDKSKSKSSGKEKGDSIKVEKMEKSSGSKKESRHDKEKTEKKEK
RDSTGGKEEKKHHKSSDKHR
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggtctactggcctgctggccctctccgtccctcccggcggagccccgcgctgcccctg
cgcctagtccgcgccatgccgccaaggaagcccaggttctcccgccctcaaaagcatcct
ctccctcctcctccccgtcgtcgtcctcgtcctcctcctcctccatcgccgcccactttc
ccgtcatgctcgtcatggccgcccccaccgtcccctctgacctcgggcccgccgttctcg
catccgggctttcggcactacaccaggaagatggcggcgggagcggcggcctcagcggtg
gcatcgacatcgggggcatccacgccggcggcgctccctgccgagtggatcaagaactgg
gacaaatcgggcaagatcgaattcttgcagctttgccgtaatctgtctgaaaatgtaact
ttcagaggtatccagcaggctttatatgagcttgcataccatgttgtcaagggaaaccta
aagcacgatcaagcttccagtgtttttaatgatgtaatagaatttcgtgatgacatgcct
tccattctagcagatgtattttgcattttagatattgaaactagttgcttagaagaaaaa
agcaagagggatcagttcatgcagttggtgtcagcatgtttgtacttggtttcagatact
atactaaaagaacgtctggacccagaaacattagaatcattagggctcatcaagcagtct
cagcagtttaatcagaaatctgtgaaaatcaagacaaaacttttttataagcaacagaaa
ttcaatttattaagagaagagaatgaaggttatgcaaaactgattgctgaactgggccaa
gatttatctggcaatatcactagtgaactgatcttagaaaatatcaaatctttaataggt
tgtttcaaccttgatcccaatagagtgttggatattattttagaagtctatgaatgcagg
ccagagtatgatgaattctttgtacctttgatagaatcttacatgtacatgtgtgaacct
caaacactctgccatatccttggattcaaatttaagttttatcaggagccaaatggagag
acacctgtttctttgtatagagttgctgcagtacttttgcaaagcaatctgatagatttg
gaagacctttatgtccatcttcttccagcagacaacactattattgaagaacataaacga
gaaatcggagaagccaaactaattgtgaggaagctcacagtggttgtattgtcttccgaa
aagactgaagagaaagagaaggaaaaggaaaaggaagaggagaaaacagaaaaaccacct
gataaccagaaactgggcttattagaagcaatgttaaaaattggcgactggcaacatgca
caaaacattatggatcagatgcctccattttatgcaacttcacacaaacctattgctgtt
gctctttgtcagcttcttcatgtgatgattgaacctctctaccgaagggttggagtaccc
aaaggtgccaaagggacaccaattcttccactgcaaaacaagagagcacccaagcaagta
gaaagttttgaagatttaagaaaggaagtgatcaacatgctttgttaccttggcccacat
ctctctcatgaccccatattgtttgcaaaagtagtgcgtcttggaaaagcatttatgaaa
gagcaccaagcagatgcaggcaagcaagaggaaaaagagaaaatggagttattattcagc
tgtttgctgagtattaccgaccaggttttgcttccttctctttctttgatggattgtaat
gcatgcatgtctgaggaactctgggggatgtttaaaacatttccataccagtatcggtat
cgcctctatgggcagtggaagaatgaaacatacaatagtcatccactactggtgagagtt
aaagctcagacaattgaccgagccaaatacattatgaagcgtctaaccaaggaaaacgta
aagccatctggaagacaaataggaaaactgagccacagcaacccaaccattttatttgat
tatattttgtctcagatacagaagtatgataatttaatcacccccgttgtcgactcgttg
aaatacctcacttccttgaactatgatgtcttggcatattgcataattgaagcactggct
aatcctgagaaggagaggatgaaacacgatgacaccacaatctccagttggcttcaaagt
ttagctagcttctgtggtgctgtttttcgaaaataccctatagaactagctggtctactt
cagtatgtggcaaaccagctaaaggctgggaaaagctttgacctgcttattttgaaagag
gtggtacaaaaaatggctggaatagaaatcactgaagagatgacaatggaccagctagag
gccatgactggtggagagcagctgaaagcagagggtggatattttgggcaaatcagaaac
actaagaaatcttcccagagattaaaagatgcacttttggaccacgatcttgctcttcca
ttgtgccttctcatggctcaacagagaaatggagtgatatttcaagaaggaggcgagaaa
catttgaagctggtgggaaaactctatgatcagtgccacgatactctggtacaattcggt
ggatttttggcttccaatttaagcacagatgattatattaagcgagtgccttccattgat
gttctctgtaatgacttccacacccctcacgatgctgcatttttcctttcacggcctatg
tatgcacatcacatttcatcaaaatatgatgaattgaaaaaggctgagaaagggaacaaa
cagcagcagaaagttcacaaatacattacagcgtgtgagcttgtgatggcccctgttcat
gactcggtgatctccttgcacatcccaaaggtctgggatgatatcagtccacagttctat
gctacgttctggtcactgacaatgtatgaccttgctgtgccacatagtagctacgaacgg
gaagtcaacaaactcaaagtccagatgaaagctattgatgacaatccggaaatgcctctg
aacaaaaagaaaaaagaaaaagaacgctgtacagctcttcaggacaagcttcttgaagag
gaaaagaagcagttagagcacgtgcaaagagtgctgcagagactgaagctggaaaaggat
aattggcttcttgcaaagtccaccaaaaatgagactataacaaaatttctgcagttgtgt
atatttcctcggtgtatcttttctgctattgatgctgtttactgcgctcgctttgtggaa
ctggtgcatcaacagaaaacaccaaacttttcaacacttctttgttatgacagagtattc
tctgatataatctatactgtagccagctgtactgaaaatgaagctagtcgatatgggagg
tttctctgctgcatgcttgatactgtaactcggtggcatagtgatagagccatatatgaa
aaggagtgtggcaactatccgggcttcctcaccatattacgggcaactggttttgatggt
gggaacaaagctgaccagttagattatgaaaattttcggcatgtggtacacaagtggcat
tataagttaaccaaggcatcggtacactgcctggaaaccggcgaatatacacacatcaga
aatatcctgatagtgctgatcaaaatccttccatggtaccccaaagttttgaacttgggc
caggctttggagagaagagtccataagatctgccaagaggagaaagagaagagacctgac
ctatatgcattagcgatgggctattctggacagttgaaaagtagaaaacattgcatgatc
cctgaaaatgatttccaccacaaggatccacccaccaagaatgcagtacctacaacagtc
caaaatgggcccggaggagctgggcttacttcttcactcacagtaaatgcagctaaactg
gaagaaagcacagctgaggagactgataaattattaaaggagaaatctcagggtgctgtt
aaagtgattaataaagctgccagtgcaacaccaaagctgaccacgagcaatgggagcaat
gcttccaacagcaaagttataaaagaaaaagaagagaaagagaaatgcgggaaggaaaaa
gataaggagaaaaaagagaaaactccagctgccactcctgaggccaaaacacctgggaag
gatgggaaagataaaccaaaggaagaaagggtgaacaaagaagacaaagcaagagatagc
aaggaaaagacacctaagtctgataaagagaaggaaaagaacaagagagaagagaagtcg
tcaaaggatgaaaaatccaagatcattgtgaccaatgctgagtcaaagtcagctgcagaa
aaggagaaagagaaggagccgtccagagagagagaagtaaccaaggatgtgaaatccaag
gaaaacattagaggaggaggaggaggaggagagaaggctccagtagctgggtccttgaag
tcacctgttccccgatcagaagcatcagagtgtgaaagggaacaaaaacgtcgcaaagtt
gatacccattcttctccatcacattcctcaacagtaaaggacaacctcagcgaactcaag
gactcttcagcaaagcactacattaaccactcaactccaacactgtccaagagtaaagag
agagaagtggacaagaaagatttggacaagtcaagggaaagatccagagagagagagaag
aaagaggaaaaggaaaggaaagatcgaaaaagggatcattcaaatagtgatcgggaagtg
cctcaggattcaaccaaacgtcgcaaagaggaaaatggaacaactggttcttccaaacat
agtaagagtgaaagtccttcagattctcctcactccaatgagaaggaaaaggacaaaagc
aaatcaaaatcttccggcaaagagaaaggagactcaataaaagttgaaaagatggagaaa
agctctggtagcaaaaaggagtccagacatgataaggagaaaacagagaaaaaagagaaa
cgggatagtactggaggaaaagaagaaaagaaacatcataagtcttcagacaaacacaga
taa
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