Podarcis muralis (common wall lizard): 114589308
Help
Entry
114589308 CDS
T06059
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04510
Focal adhesion
pmua04512
ECM-receptor interaction
pmua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114589308 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114589308 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114589308 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmua04147
]
114589308 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
pmua00536
]
114589308 (COL4A6)
Exosome [BR:
pmua04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114589308 (COL4A6)
Glycosaminoglycan binding proteins [BR:
pmua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114589308 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114589308
NCBI-ProteinID:
XP_028571428
LinkDB
All DBs
Position
Z:25277308..25449886
Genome browser
AA seq
1712 aa
AA seq
DB search
MRAGLVAFLVAFCLTPDSVNGGGKKFYNGPCGGRDCSTGCQCFPEKGGRGQPGPIGNQGR
MGVPGFTGPEGLRGSKGERGSTGAPGTAGLKGDKGPMGVPGFPGISGVPGHPGQPGHRGL
PGLDGCNGTIGSPGVAGPDGFPGVQGPPGDPGPKGPKGEPSFAQGVFKGMKGERGRSGLD
GAAGPKGFSGPTGPIGPAGLPGFPGPPGPPGPPGPVGNSGLVFQGEKGAKGDVGLPGPAG
PPPSTGIQEFMGFPKGQQGAKGVPGPEGFPGPPGFPGPPGFRIFREKGEKGVPGLPGPRG
DMGLKGFDGGLGRPGLSGEPGFPGRDGSPGGKGDFGDVGPPGPTVTVDGEGAVVSGPPGE
PGTRGTPGARGDQGFDGLPGLPGQAGFPALTPGSPGRMGIPGDLGPKGDVGDPGRETIGL
PGPPGRDGDPGLPGPPGLPGPSFPIFTPGAILAGEPGETGTPGQRGPPGLFGAKGYKGEA
GDCACDGGITRAGFKGEPGAPGQPGRPGEPGPKGPLGDPGDGAQGPPGQPGFFGQPGLPG
LKGEKGEPYLSSGRGTKGDPGNVGPRGPSGESGVPGRDGIPGLPGRPGPPGDGGLGFPGD
KGFSGLPGLKGRRGESGLPGVGFPGPAGVPGPPGDPGIDGYPGQPGPPGAPGDCCCGEEV
GNEVLDAQGGITLPCLIPGAFGPPGPPGSPGSPGSKGRKGLPGLPGQPGLNGFKGPLGSP
GLVGPSGPPGFSGIRGEPGPQGSPGPDGTNGLPGNPGSPGLPGPRGPPGEVFGAESGAPG
QPGLPGLAGDKGILGEPGLPGPKGVDGRPGLSGAKGGRGEPGLLGIDGPRGPPGPGGPFG
IKGKPGPMGAVGFPGSRGCQGLPGEKGRSGDPGAPGPIGMKGFPGLVGLPGFPGELGLPG
ALGPPGADGNPGFPGLKGEKGFAGVIGFPGMLGLPGIPGVNGPKGASGLPGRDGNIGFPG
LDGLKGDRGDRGPPGPPVLRPLEQELAFKGSKGEPGFAGNAGFTGPRGNKGLPGPRGQPG
PPGIAGFPGREKGPPGDSGLPGTSGSRGFPGQKGTSGILGFPGMPGGNGDEGLMGPSGFP
GNTGLRGSKGDRGESFGIPGGVGPKGEQGDPGLPGARGLDGPKGEPGFPGSVGIKGNKGA
PGDFGQDGPPGFPGVGISRGNPGFPGIPGQRGPPGLTGRPGIAGLKGFPGSPGLTGLNGL
PGTKGSPGTPGLSEIGLPGPAGMPGAKGEQGVPGFQIGPPGLPGQKGPAGDLGRPGAMGP
PGLQGPPGISLPSKIPGRPGDAGLPGEDGRPGFPGPPGPRGPPGPASNQGVTGDPGLPGH
PGLKGFKGDMGSPGLGGVPGASGFKGFRGDPGLMGMPGKDGPPGDAGFPGPKGEAGRRGF
PGLQGAPGLVQKVEEVKVAPGLIGLPGIDGIPGLNGDTGFQGLTGPQGPKGMAGRPGQMG
VNGLPGSPGVVGDPGTPGSTGPPGFEGMSGKPGPAGLPGMPGRSVGVGYTLVKHSQSEQI
PPCPVGMNKLWEGYSLLYVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRN
DKSYWLSTTAPIPMMPVSSFQISQYISRCSVCEAPSQAVAVHSQDITIPQCPEGWRSLWI
GYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFSNKYSFWLTTVEQ
SQQFTDFTISETLKAGQLRTRVGRCQVCMKNL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgggctggttgcgttccttgttgctttctgcctgactccagattctgtgaat
gggggcgggaagaaattttataatggaccttgtgggggtcgagactgcagtacaggctgc
cagtgctttccagagaaaggtggtcggggtcaaccaggaccaattgggaaccaaggacgg
atgggtgttccaggctttactgggccagaaggcttgagggggtcaaagggagagagaggg
agcacaggtgccccaggtacagctggactgaagggagataagggcccaatgggagtcccc
ggatttccaggaatatccggagttcctggacaccctggtcagccaggacacagaggcttg
cctggcctggatggctgtaatggcactattgggagtcctggggttgcaggaccagatgga
tttcctggtgtgcaaggtcccccgggtgaccctggaccaaagggaccaaaaggcgagcct
tcttttgcccagggagtttttaagggaatgaagggagaaagaggtcgttccggattggat
ggtgcagctggacctaaaggattctctggccctactggtcctattggcccagctgggcta
cctggctttccggggccaccaggtccacctggccccccaggtcctgtgggtaacagtggc
ctagttttccaaggagaaaaaggagcaaagggagatgttgggcttccagggcccgctggt
cctccaccttctacagggatccaggaattcatgggattccccaaaggacagcaaggagct
aagggtgttcctggtcctgaaggctttcctggtcctcctgggtttcctggtcctccaggc
tttaggattttcagagaaaagggagaaaagggtgtacctggtttgccagggccaagggga
gatatgggattgaagggatttgatggaggcctagggagaccgggcttatcaggtgaacca
ggatttccgggacgggatggatcaccaggaggaaagggcgactttggggatgttggtcca
ccaggtcctacagttactgttgatggagaaggtgccgtggtctcgggacctcctggagag
cctgggacacgcggaacccccggcgctagaggtgaccaagggttcgatggtttaccaggc
cttcctggccaagcagggtttcctgcacttactccaggttccccgggtcgtatgggaatc
ccaggtgatctgggaccaaaaggagacgtaggagacccaggcagagaaacaattgggttg
cctggtccaccaggcagagatggagatccaggtttgccaggtcctcctggattacctgga
ccatcatttcccatatttactccgggagcgatccttgctggagaacccggcgagacagga
accccaggacagagagggccaccaggactgtttggggcaaaaggctacaaaggtgaagct
ggagattgtgcttgtgatggagggatcacacgagcaggcttcaaaggggagccaggtgcc
cctggtcagcctggaagacctggtgaaccaggcccaaaaggacctttgggagatccagga
gatggtgcacaagggccacctggtcaaccaggtttctttggtcagcctggtcttccaggc
ctcaaaggagagaaaggagaaccgtatctgtcctcaggcagaggcaccaagggagatcca
ggcaatgtcggccccagagggccttcaggcgaatctggagttcctggtagggatggcata
cctggtttgccaggtcgaccaggccctccaggtgatggtggattgggctttccaggagac
aaaggtttttcagggttacctggtttgaagggtcggcgtggagagagtggtcttcctgga
gttggtttcccaggcccagctggagttcctgggcctccaggtgacccaggaattgacgga
tatccagggcaacctggtcccccaggtgctccaggtgattgctgctgcggtgaggaggtt
ggtaatgaagtcttagacgctcagggaggtataactttgccctgcctgattcctggagca
tttggtccacctgggcctccaggatccccaggatctccaggctccaagggcagaaaaggt
ctgccaggccttccagggcagccaggattaaatggctttaaagggccgctaggatcacca
gggttagtagggccttcaggaccaccaggcttctctggcattcgcggagagccagggcca
caaggatccccaggacctgacgggacaaatggattgcctggaaacccaggctcccctggt
ttgccagggccaagggggccgcctggtgaagtgtttggtgctgaaagcggagctccaggg
caacctggtctgccaggattggcaggagataaaggcatcctcggggaacctggccttcca
ggtccgaaaggtgtggatgggaggccaggtctgtcaggtgcgaaaggcggacgtggggaa
ccaggccttctgggcattgacggaccacgaggacctccaggacctggaggcccttttggc
attaaaggaaagccaggtccaatgggagcagtcggcttcccaggatcacgaggctgtcaa
ggacttcctggagaaaaaggcagaagtggtgatccgggggcaccaggccccattggtatg
aagggcttccctggtcttgttggtctcccagggtttcctggtgaactagggttacccggg
gcacttggccctccaggtgcagatggaaatccaggtttccccggattaaaaggagaaaag
ggctttgcaggtgtcatcggtttccctggaatgctaggcttacccggaatcccaggggtg
aatgggccaaaaggagcttccggattaccaggaagagacggaaatattgggtttcctgga
ctcgatggtctaaaaggagacagaggtgaccgtggtcctccaggacctcctgtccttaga
cctctagaacaggagcttgcattcaaaggaagcaaaggagagcctggttttgctgggaat
gcagggtttacaggacctagagggaacaagggactccctggtccccgtggacagccagga
cccccaggaatagctgggtttccaggcagagagaaaggacctcctggagactcaggtctc
cctggaacatctggttctcgcggcttcccaggacagaagggaacctctggcatcctaggt
tttccaggaatgcccggaggaaatggtgatgagggtttgatggggccatctggattccca
gggaatacgggattgcgtggttcaaagggtgaccgaggagaatcatttggaatcccaggt
ggtgtaggacctaaaggagaacaaggggaccctggacttccaggtgcaagaggacttgat
ggaccaaagggtgagccaggattcccaggaagcgttgggataaaaggaaataaaggtgca
ccgggggactttggccaagatggaccaccaggtttccctggagttgggatttcaaggggc
aacccaggttttccaggcattcctgggcagcgtggccctccaggacttacagggcgtcct
ggcattgcagggctaaaaggattccccggctctccaggcttgactggcttaaatggttta
ccaggcacaaagggctcacctggaacaccaggtctgagtgaaattggacttccagggcct
gcaggaatgccaggtgccaaaggagaacaaggcgttcccggttttcaaattggaccccca
ggcttgcctggacagaagggacctgcaggagacttgggtcgtcctggagctatgggtcct
cctggtttgcaagggcctccaggcatctctcttccatcaaaaattcctgggagacccggt
gatgctggacttcctggagaagatggtagaccaggcttcccaggtccccctgggccacgt
ggaccaccaggcccggcctccaaccaaggtgttactggtgacccaggcctccctggtcat
cctggactaaaaggtttcaaaggtgacatgggctcccctgggttgggcggagtcccggga
gcatcaggattcaaaggcttcagaggtgacccaggtttaatgggaatgccaggtaaagat
ggtcctccaggagatgccggtttccctgggccaaaaggtgaagcaggccgtcgagggttt
cctggtcttcaaggggctcctggtcttgtgcagaaagttgaagaagtcaaagttgctcca
ggcttaattggtctgccaggaattgatggcatccctggtttgaatggagatactgggttc
cagggcctgactggaccacaaggccccaaagggatggcaggtagaccgggccagatggga
gtcaatggtttgccagggtcacctggtgtagttggagatccagggactccaggaagtact
gggccaccaggatttgaaggaatgtctgggaagcctggtcctgctggtttacctggcatg
ccaggccgcagcgttggggttggctacacgttggtgaagcacagccagtcggagcagatc
ccgccgtgccctgtagggatgaacaagctctgggaagggtacagtttgctgtatgtggag
ggccaggagaaggctcacaaccaggaccttggttttgccggctcctgcctgcctcgcttc
agcacgatgcctttcatttactgcaacattaatgaggtctgctactatgccagccgcaat
gacaaatcctactggctctccaccacagctcccatccccatgatgcccgtcagcagcttc
cagatctctcagtacatcagccgctgctcagtatgcgaagctccttcccaggctgtggct
gttcacagtcaggacatcaccatccctcagtgcccagaaggctggcgtagcctctggatt
ggatattccttcctcatgcacactgcagctggagctgaaggtggcggccagtccctcgtc
tcccccggctcttgcctggaagacttccgtgccacccctttcatcgaatgtaatggtgcc
cgagggacctgccactacttctcaaacaagtacagcttttggctgacgacggttgagcag
agccagcagtttaccgactttaccatctccgagactctgaaggcaggccagctccggaca
cgagttggtcgatgccaagtctgcatgaagaacttgtag
DBGET
integrated database retrieval system
