Podarcis muralis (common wall lizard): 114591191
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Entry
114591191 CDS
T06059
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(XI) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114591191
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmua00536
]
114591191
Glycosaminoglycan binding proteins [BR:
pmua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114591191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
114591191
NCBI-ProteinID:
XP_028573692
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All DBs
Position
2:126382215..126455029
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AA seq
1734 aa
AA seq
DB search
MTGAVWHRVALSVSKKQVTLILDCKKKVTRPLPRGNQPAIDTRGITVFGTRILDEEVFEG
DIQQLLISSSPQAAYDFCEDFSPDCDVKAAQKPQAQEAQRNPSRPEYFGEDLQEYDAYPY
YYGPSEGGLGPLSSAPLGGVSDQKPAKGKPPAKPKPKPKQPQKRQLASTAPAYAAKTGPK
NGSKYPANGKSGAKAGSTKATTKKPLGKSGGQAHAGAVGARKPGNGYQQDVGLLPTEEPW
GAHEYLDYTLPPEAEETYWEEGPTHEASLPVASSPRGEEEAPSPRPAEEEVFTEEEVPGV
GLEYEYAYRSYGEGAEPSELGPVLSAETPHGGGAVRGARGYKGEKGEPAVFEPGMLVEGP
PGPEGAPGISGPPGTTGPPGPPGDSGERGPPGRPGIPGSDGSPGPPGTSMMLPFRFGSSG
GGKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSNGMKGEHGDFGPQG
PRGPQGLTGPPGKPGRRGRAGADGARGMPGETGIKGDRGFDGLPGLPGEKGHRGDSGSQG
VPGPPGEDGERGDDGEVGQRGLPGEPGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGNLG
PQGEPGPPGQQGTPGTQGLPGPQGAMGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGHPG
TKGNQGPSGPQGPVGYPGPRGAKGMDGIRGFNGHKGEKGEEGFPGFKGDMGVKGDRGEVG
VPGSRGEDGPEGPKGRTGPHGDPGPIGLVGEKGKLGVPGLPGYPGRQGPKGSQGFPGFPG
TNGEKGDGXGISGKLGPRGERGPTGPRGQRGPRGATGKSGAKGTSGSEGPAGPPGERGQP
GPQGPNGFPGPKGPPGPSGKDGLPGHPGQRGEVGFQGKTGPPGGPGVVGPQGPAGETGQM
GEXGHPGPPGPPGEQGLPGPSGKEGTKGDPGTPGGPGKDGPAGLRGFPGERGLPGTAGGP
GLKGNEGPAGPPGPAGSPGERGGPGPGGPIGPPGRPGPQGPAGSAGEKGVPGEKGPIGPA
GRDGVQGPVGLPGPAGPPGGPGEDGDKGEVGDPGQKGGKGAKGEHGPPGPPGPLGPLGQP
GAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPP
GPPGPRGPAGPSGANGPQGPPGGVGNLGPPGQKGEAGEPGGPGVPGEPGGKGPRGERGEK
GEAGAAGVAGPPGGKGPPGDDGPKGNPGPVGFPGDPGPPGEMGPRGQDGAKGDRGEDGEP
GEAGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKGEPGALGAPGKTGPVGPQGPP
GKPGTDGLRGLPGSVGAQGKPGATGQAGPPGPVGPPGLPGLRGDSGPKGEKGHPGLIGLI
GPPGEQGEKGDRGLPGPQGTAGQKGETGIPGPTGPLGPAGPPGLPGPGGPPGPKGATGQA
GPKGQRGVPGPPGRPGPPGEVIQPLPIQRPKKNKRSVDGSQLVAEEQPPSDGAGQAPSEG
MEEIYGSLNSLRQEIEQMRKPLGTQESPGRTCQDLLLCHPDLPDGEYWIDPNQGCSRDSF
KVYCNFTAGGETCVFPSQEIREVKMSTWEKEKPQTWFSQFQKGRKFSYSDADGNPLGIVQ
LTFLRLLSVSARQNFTYHCQRSAAWHSRGEPAPGGYQRALRFQGANEDELSYDSSPYVKA
LRDGCATRKGSDKTVMEVHTPQVEQLPLTDVRVADFGEPGQRFGFEVGPVCFRG
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagcagtgtggcaccgggtggctctgagcgtcagcaagaagcaggtgaccttg
atcctagactgcaagaagaaagtgacccgccctttgccccgcggcaaccagccggccatc
gacacgcgcggcatcaccgtctttggaacccgcatcctggacgaggaggtcttcgagggt
gacatccagcagctgctcatctcctccagcccccaagcagcctacgacttctgcgaagac
ttcagccccgactgcgacgtgaaggccgcccagaagccccaagcgcaggaggcccagaga
aaccccagcagacctgagtactttggtgaggacctgcaggagtatgacgcctacccctac
tattacgggcctagtgagggcggattgggccctctctcctccgcgcctctggggggagtc
agtgatcagaaaccggccaaggggaagccccccgccaagcccaaaccaaagccgaagcag
ccccagaaacgccagctcgccagcacggcgcccgcctacgccgccaagaccggccccaaa
aacggctccaagtaccccgccaacgggaagtccggcgcgaaggccggcagcaccaaggcg
accacgaaaaaacccctgggcaaatcggggggccaggcccacgctggcgccgtcggagcc
cggaagccggggaacggctaccagcaggacgtgggcctgctccccacagaggagccctgg
ggggcccatgagtaccttgactacaccttgccccctgaggcggaagagacctattgggaa
gagggccccacacacgaggcgtccctacctgttgcctcgtcgccacggggagaggaggaa
gcgcccagcccacgtccggccgaggaagaggtgttcactgaagaggaggtccctggcgtg
gggctggagtacgagtacgcctataggagctatggcgagggggccgagccgtcggagctg
gggcctgtgctctcggccgagaccccccacggcggaggcgccgtccgaggagccagaggc
tacaaaggagagaagggagagccggccgtcttcgaacccgggatgctggtcgaaggtccc
ccaggccccgaaggagctccgggtatcagcggaccaccagggaccacgggacccccagga
ccccccggcgactctggggagaggggccctccaggacgccctggcatccctggctcagat
ggatctcctggaccccctggcacgtccatgatgcttccgttccgatttgggagcagcggt
ggtggaaaggggccagtcgtggcggcccaggaagcccaagcccaggccatcttgcaacaa
gctcggctggccttgcgtggccccccaggacccatgggctatacgggtcgtcctggaccc
ctgggtcaacctggcagcaacggcatgaagggagagcacggagactttggtccccagggt
cctcgaggtccacaggggctgactggacccccagggaagcctggacgccgaggtcgtgct
ggagcggacggtgcccgggggatgcccggggaaacgggcatcaagggcgatcgcgggttt
gatgggctcccaggcctcccgggggagaaaggccaccggggtgactctggatctcagggt
gttcctggtccccccggggaagatggcgagaggggagacgacggagaggtcggccaacgt
gggcttcctggagaaccgggaccccgaggtcttcttggccccaaaggacccccagggatc
ccaggccctccgggtgtgcgtggcatggatggaccccacgggcccaaggggaacctggga
cctcaaggggagccgggaccccctggccagcaggggacaccagggacgcagggattgccg
ggacctcaaggtgcaatgggacctcatggggagaagggccccagagggaaacctggactt
ccggggatgcctggttctgacggcccgcctggccaccctggcaaagaggggcacccaggc
accaaaggaaaccagggcccgtctggtcctcaggggccagttggctacccggggcctcgc
ggggcgaagggaatggacggcattcgaggcttcaacggccacaaaggagaaaagggggaa
gaaggatttcctggtttcaagggtgacatgggcgtgaaaggtgaccggggcgaagtcggc
gtcccaggatcccgaggtgaagacggccccgaaggccctaaaggccgcactgggccccac
ggcgacccaggtcccattggactcgtcggagagaaggggaaactgggtgttccgggtctc
cctgggtatcccggccgacaaggacctaagggctctcaaggctttcctggcttccccggg
acgaacggcgaaaagggggacgggtaagggatctctgggaagttgggaccccgaggcgag
agaggtcccacggggccacgaggccagcgggggccacgaggagccacagggaagtctgga
gcaaagggcacctcgggcagcgaaggaccagccgggccccccggagaacggggtcaaccg
ggaccacaaggaccaaacggattccctgggccaaaaggacctccgggcccctcggggaag
gacggtctgcccggacaccctggccagcggggagaagtcggattccaaggcaagaccgga
cccccaggaggaccgggggttgtggggcctcagggccccgcaggagaaacaggccagatg
ggggagnagggccaccctggcccacccggacctcctggagagcaaggcctgcctggacca
tctgggaaagaaggcacaaagggtgaccccggcacccctggaggacccggcaaggatggc
ccggctgggctgcgaggcttccccggagagcgcggcctgcctggaactgccggcgggcct
ggactgaaaggcaacgaaggacccgctggacccccaggacccgccggatccccaggggaa
agggggggcccagggccaggtggccccatcggacccccaggaagaccaggccctcaagga
cccgctggctcggctggggagaaaggcgtgcctggcgagaaaggtcccattggccccgca
ggccgcgatggcgtccagggccccgtcgggctgcctggccccgcaggacctccggggggc
ccaggtgaggatggcgacaagggtgaagtgggcgatcctggccagaagggcggcaaagga
gcgaaaggggagcatgggccaccgggaccccctggcccactgggtcctctcgggcaacca
ggagccgcaggcgcagacggagagcctggagcgaggggcccccaaggccactttggagca
aagggggatgagggaacccgagggtttaatggccccccagggcccatcggcctgcagggt
ctgcctggaccatctggggaaaagggggagacaggcgacgtggggcccatgggacccccc
ggaccccccggaccacgtggcccagccggaccctctggagcaaatggtccccaaggcccg
ccaggcggcgtaggaaaccttggccccccaggacagaagggtgaagcaggagagccggga
ggtcctggtgtccctggagaacctggtggcaagggcccaaggggagaacgaggagagaaa
ggcgaggctggagctgctggcgtggccgggccccctggcgggaagggcccccccggagac
gatggccccaaaggaaaccccggtccagttggtttccctggagatccgggaccccctggc
gaaatgggacctcggggccaagacggagccaaaggcgaccggggagaagacggagagccg
ggagaggcgggctctccgggacccactggtgagaacggaccccccggcccgcttggcaag
aggggtccagccggcaccccaggccccgaaggacgccaaggggagaaaggcgccaaggga
gagccaggagcgctgggagccccagggaagacggggcccgtgggccctcagggaccccca
gggaaaccagggacggacggactgaggggcctccccggatcagtgggggcacagggcaag
ccaggagcgaccggccaggctgggcccccgggaccagtgggcccccctggcttgcctggg
ctgagaggcgactctggacccaaaggagagaagggacaccccggtctcatcggcctgatc
ggacccccaggagagcaaggggagaagggagaccgaggcctgcctggcccacaaggcacc
gcaggccagaaaggagaaacgggaatccctggtccaaccggccccctcggacccgcaggc
ccccctggtctccccggtccaggcggccccccaggtcctaaaggagccacgggtcaagcg
ggacccaaaggtcagcggggagtccctggtccccctggacggccgggaccccccggagag
gtgatccagccgctgcccatccagaggcccaagaagaacaagcgttcggtggacggcagc
cagctggtggccgaggagcagccgccgtcggacggggcaggccaggcgccctcggagggc
atggaggagatctacggttccctcaattccctccggcaggagattgagcagatgaggaag
cccctgggcacccaggaaagccccgggcgaacctgccaggacctgctgctctgccacccg
gaccttcctgatggcgaatactggatcgaccccaaccagggctgctcacgagattccttc
aaggtctactgtaatttcacggccggcggagagacctgcgtcttccccagccaggagatt
cgagaggtgaaaatgtcgacgtgggagaaagagaaacctcaaacctggttcagccaattc
cagaaaggcaggaagttctcctactcggacgccgacggcaaccccctgggcatcgtgcag
ctcaccttcctgcgcctcctgagcgtctcggcccggcagaacttcacctaccactgccag
cgttcagccgcctggcacagccgcggggagccggcccccgggggctaccagcgcgccctc
cgcttccagggcgccaacgaggacgagctgagctacgacagcagcccctacgtcaaggcc
ctgcgggacggctgcgcgacacggaaaggatcggacaagaccgtcatggaggtccacacc
ccccaggtggagcagctgcctttgacggacgttcgcgtggcggactttggggagcccggc
cagaggtttgggttcgaggtggggccggtctgcttccgaggctaa
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