Podarcis muralis (common wall lizard): 114593293
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Entry
114593293 CDS
T06059
Name
(RefSeq) collagen alpha-1(XIX) chain-like
KO
K24340
collagen type XIX alpha
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmua00536
]
114593293
Glycosaminoglycan binding proteins [BR:
pmua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114593293
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
114593293
NCBI-ProteinID:
XP_028577501
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All DBs
Position
3:37012932..37069856
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AA seq
613 aa
AA seq
DB search
MATAMIDPVRHALIRPFQSLEASVGPPGALALQDSFKGPFYQSYQEKMGLKGAKGEKGAS
GDPGPSGPIGSPGPQGLTGEHGVPGRPGIKGEKGPAGIPGAVGPRGPKGERGLPGVQGPP
GEMGPAGNGTQGPPGLKGPPGAPGFQGSRGPPGLPGTPGTPGIDGIPGRDGKPGLPGPPG
DPVALPLLGDMGALLKGDPGPRGPPGIPGREGPKGNKGERGFPGLPGEKGDEGLQGIPGL
PGLAGPSGPSGAVGRPGHPGSPGTKGEKGNEGIPGKPGPPGPPGVPYNEGNGMSSLYKLQ
GGANVPTYAGPPGAPGPKGDTGAVGEPGPMGLPGLEGLPGEKGDRGPAGPPGVPGVPGKH
GAPGPPGIPGEPGERGPVGDIGFPGPEGPAGIPGINGKDGLPGPQGLLGKPGDRGPKGER
GDQGIPGDRGLQGERGKPGLPGEKGSVGPMGPSGNKGNPGSPGHKGPPGSPGVPGLPADS
VSFEEMKKYIRQEVLRVFEERMAQFVSQLKLPAAMLASQTHGKPGLPGKDGLPGPPGEPG
PPGYRGQKGERGEPGIGLPGDPGPPGPSVIGMPGPPGAPGGPGPHGPPGPSGRCNPADCY
YHVSQTQPRTTGK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggccacagctatgattgatcctgttcggcatgccctgattagaccttttcaaagtctg
gaagcttctgtaggtcctccaggtgcgttagcgcttcaagattcctttaaaggtcctttt
taccagagttaccaagaaaaaatgggcttgaaaggagcgaaaggtgaaaagggtgcatca
ggggaccctggcccttctggacccattggaagtccaggaccacagggcttaacgggagaa
catggagtacctggaagaccagggattaaaggagaaaagggaccagcaggcattcctgga
gcagttggtccacgggggcctaagggtgaaagagggctgcctggagtacaagggcctcct
ggagagatgggtccagctggaaatggaacccaaggtcctcctggtcttaaggggcctcct
ggggcaccgggcttccagggctcaagaggacctcctggattaccaggtactccaggaacc
ccagggatcgatggtattccaggacgtgatggaaagccaggacttccagggcctccaggt
gacccagttgctcttcctcttcttggagatatgggtgctttattgaagggtgatcctggt
ccaagaggtcccccaggaatcccaggtagagaagggcctaagggaaacaaaggtgaacgt
ggatttcctgggctgcctggagaaaaaggtgatgagggtcttcaaggtattccaggactt
cctggtctagcagggccttctggaccttcaggggctgtcggaagacctggacacccaggc
tcaccagggacaaaaggtgaaaagggaaacgagggtattcctggaaaacctggacctccc
ggaccacccggtgtgccgtacaatgaaggaaatggcatgagcagcctatataaactacag
gggggtgccaacgttcccacatacgctggtccacctggggcgcctggcccaaaaggtgac
actggagcagtgggagaaccgggtccaatgggactgccaggattagagggacttcctgga
gaaaagggagaccgtggaccagcaggtcctccaggagttccaggagtacctggaaagcat
ggtgctccaggaccaccagggatccctggtgaaccaggtgaaaggggccctgttggagat
attggctttcctggaccagaagggccagctggaataccaggcataaatggaaaggatgga
ttacctggccctcagggtttattgggtaagcctggtgacagaggtcccaaaggagaacga
ggggatcaaggcataccaggagacaggggcctgcagggcgaaagaggaaagccaggcctt
ccaggagagaaagggtctgtagggcccatgggcccctcagggaacaaagggaatcccgga
tcgccagggcataagggccctccaggttcaccaggtgtcccaggcttaccggctgactca
gtttcgtttgaagaaatgaaaaaatatatcagacaagaggtccttagagtttttgaagag
aggatggctcagtttgtatctcagctcaaattgcccgctgccatgcttgcttcccaaact
catgggaaaccaggtcttcctggaaaagatgggctacctgggccacccggagaacctgga
cctccaggctacagaggacagaaaggtgaaagaggtgagcctggaattggcctgccaggt
gatcctggtccacctggcccttcagtcattggtatgccgggaccacctggagctccagga
ggaccaggtccacatggcccacctgggccatcaggaagatgcaacccagcagattgctat
taccacgtctctcaaactcaaccacgaacaactggcaaatga
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