Podarcis muralis (common wall lizard): 114593454
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Entry
114593454 CDS
T06059
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04510
Focal adhesion
pmua04512
ECM-receptor interaction
pmua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114593454 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114593454 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114593454 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmua04147
]
114593454 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
pmua00536
]
114593454 (COL4A2)
Exosome [BR:
pmua04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114593454 (COL4A2)
Glycosaminoglycan binding proteins [BR:
pmua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114593454 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114593454
NCBI-ProteinID:
XP_028577623
LinkDB
All DBs
Position
3:232083..427874
Genome browser
AA seq
1718 aa
AA seq
DB search
MRRPPPLRVARPTGRVSQITLFLGLVLLLSGKVQAGGKSYTGPCAGRDCSWGCECFPEKG
ARGQPGLLGQQGFPGPPGVGGIPGLPGHKGYKGERGQPGITGPKGEAGQRGVTGFSGADG
IPGHPGQAGSRGKPGHDGCNGTKGDAGQQGGQGPGGLPGFFGIQGPKGQKGEPFVFTPEL
AVQFRGDTGDPGLRGFPGPQGAPGAVGIFGPVGNTGLPGPPGPPGSPGLQGNRGLGFYGE
KGDKGDIGPPGLPGRPSTGEFVTSTDVISSEYKGEKGIKGIRGEAGIPGHHSLSAEKGEE
GITGFTGQRGLPGINGLTGTEGDVGFPGPDGFPGIPGQKGTKGEPGDKGAQGPPAYAPYP
KLIKGARGDWGLPGAPGPEGDRGEQGSPGSAGPQGSSDDNSVGRGLPGEMGPKGLTGDPG
FAAVYPGPPGLDGDPGLQGSPGVPGPPGSPDTSVAVKGLPGFPGPPGNQGYPGPRGQKGL
KGEPGDCKCAESTERKRGPAGQPGPPGFPGPMGPVGRKGDPGDQGPHGVPGFLGSKGLPG
VPGPPGQQGPKGDSRYVTTRGAKGDQGIPGIPGYKGENGLPGRDGTDGLPGLPGLPGDGV
RGEPGDPGEPGPLGPKGFPGEEGLPGVGLPGPKGYPGPLGDPGVPGSPGFQGSPGPPGAP
AEIDCGQTVKVFFRGNRTEPIQSGTSCIQAPKGTPGTPGIPGPRGAKGTRGIAGELGLHG
SKGLKGSPGDQGREGLAGPPGFPGPRGNRGAPGLPGEQGFPGSPGLPGWPGPPGVKGVAG
DRLGAPTGPQGDAGPPGIPGLKGPPGDHGLPGLRGSDGIPGQPGAKGHPGSPGPAGLTGL
PGPQGPFGFPGLPGQQGITGRAGSPGFVGSPGARGDAGDPGKPGPVGMKGLAGDRGEPGF
IGTKGKAGEPGLPGVDGMHGLPGVKGAKGSSGIGGFKGAIGVRGWPGQNGIKGEAGFTGL
PGVRGLPGDSGLKGDRGDRGPPGSPPKIMPSMMLDVKGEKGNEGESGAQGSFGFKGTKGA
LGYPGQTGRPGSPGFPGYEKGQKGDYGIKGIKGISGYIGVSGGRGISGFPGATGRRGEKG
IPGIDGIFGESGQPGEIGDWGDTINLPGRAGSKGDAGITGAKGVEGAKGGKGDAGVPGFP
GIQGMRGSPGSPGLQGQRGFPGQVGEQGLSGDPGFPGSSGEKGSSGWIGLPGSKGAAGAR
GITGLHGLPSTKGFPGSPGPDGYGPPGFPGIWGDKGTVGEPSPIEGSRGAPGPKGERGDL
GQRGSPGSPGPEGRPGLPGVSNISGAPGDVGSPGLDGVPGYPGPPGPPGIAAPPGSKGEV
GQIGIIGEDGSKGLRGDHGADGRPGIPGFPGAKGYKGEQGVMGFVGILGTPGDFGPTGPK
GDRGFPGFQGPPGSPGLPPVLPKLVSEQGSPGAPGNRGLPGTLGEMGPQGPPGSPGSRGP
MGKQGLQGRGGIPAAPGFRGDQGRTGLQGPGGFEGAAGDPGTPGLPGMPGRSINMGYLLV
KHSQADQEPMCPVGMSKLWSGYSLLYFEGQDKAHNQDLGLAGSCLTRFSTMPFLYCNPGD
VCYYASRNDKSYWLSTTAPLPMMPVQEEEIRPYISRCSVCEAPAVAIAIHSQDATIPHCP
EGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGAQGTCHYFANKYS
FWLTTIDNQFQHSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgccccccgccgctgcgcgtcgcccgccccactggccgggtttcacaaatcacg
ctctttctgggattggtgctgctgcttagtggtaaggtgcaagctggagggaagtcttat
acaggaccttgtgcaggaagagactgcagttggggttgtgaatgtttcccagaaaaagga
gctcgtggccaaccaggacttcttgggcagcagggattcccagggccgcctggagtggga
ggtatcccaggacttccagggcacaaaggatataaaggcgaaagaggccagccaggaata
actggaccaaagggagaagcgggacaaagaggggtcactggtttttctggtgcagatggc
attcctggtcatccgggtcaagcaggatcaaggggcaaaccaggccatgatggctgtaat
gggaccaagggggacgctggtcagcagggaggccagggacctggaggcttgcccggattc
tttggaatccaaggacccaaaggtcagaagggagagccctttgtttttactccggaatta
gctgtgcagttcaggggagacactggtgacccaggtttgaggggcttcccgggacctcag
ggtgctcctggtgcagtgggtatatttggtccagttggaaacacaggtctacctggacct
ccagggccaccaggatctccaggacttcagggcaacagaggccttggcttttatggagaa
aagggtgacaagggtgatattgggccccctggtctacctgggcgtccatcaacaggagag
tttgtcacttcaacagatgtaatttcaagtgaatataagggtgagaaaggaataaaagga
attaggggagaagctggaattccgggtcatcattcactttcagcagaaaagggagaggaa
ggaataacaggctttacaggacaaagaggtttgccgggaatcaacggtctcactggaaca
gaaggggatgtgggtttcccaggacctgatggcttccctggcatacctggtcaaaaagga
actaagggagagccaggagacaaaggtgctcaaggaccaccagcttatgctccatatccc
aaactaataaaaggtgcaagaggtgactggggactccctggtgctcctgggcccgagggt
gaccggggcgagcaaggcagtcctggaagtgctggtccacaaggatcatcagatgataac
tctgtgggaagaggtttgcctggagaaatgggccccaaaggcctgactggcgatccaggt
ttcgcagctgtttatccaggtcctccaggattagatggcgatcctggattacaaggatca
ccaggtgtccctggccctccaggaagtccagatacttctgttgcagtgaagggtcttcca
gggtttcctggtcctccaggaaaccaaggttacccaggaccacgagggcaaaaggggttg
aaaggagagccaggagattgtaaatgtgctgaaagtaccgaacgaaaaagaggccctgct
gggcaacctggtccaccaggatttccaggtccaatggggccggtggggagaaaaggagac
cctggtgatcaaggcccacatggagtgcctggctttcttggctcaaaaggattgcctggt
gtacctgggccacctggacaacaagggccaaaaggagattcgcgatatgttaccacaaga
ggtgctaaaggagaccaaggaattccagggattcctggatataaaggagaaaatggtttg
ccaggaagagacggcacagatggtttaccaggactacctgggcttccgggtgatggtgta
cgaggtgaaccaggggatcctggtgaacctggtccgttaggcccaaagggttttcccgga
gaagaaggcttgccaggtgttggcttgccaggcccaaagggatatcctggccctctgggt
gaccctggggttcctgggagtcctggcttccaaggttccccaggacctccaggcgctcct
gctgaaatagattgtggacagacagtcaaagtctttttcagaggtaacagaactgagcca
attcagtcaggaactagctgtattcaagcaccaaaaggaactccaggaactccagggatt
ccaggaccaagaggtgcaaaaggtacaagagggattgcaggcgaactcggtctgcatgga
tccaaagggctgaaaggctctccgggagatcaaggtcgtgagggcttagcaggcccacca
ggatttcctgggcccagaggaaacagaggtgcaccaggtttgcctggggagcagggcttt
cctgggagtccaggattgccaggttggccaggccctccaggagtgaaaggagttgcaggt
gacagacttggagcacccacaggcccccaaggggatgctgggccgccgggaatcccagga
ctgaaaggccccccaggagatcacggcttgccaggactgagaggaagtgatggcattcca
ggtcagcctggagctaaagggcatcctgggtctcctggccctgctggcttgactggtttg
ccaggaccacaaggaccatttggattccctggactgccaggccagcaagggatcacgggc
agagctggctcaccagggtttgtaggctcaccgggtgccagaggagatgcaggagaccca
gggaaacctggtcctgtaggcatgaaaggtctggcaggtgacagaggtgaacctggtttc
attggaactaaaggcaaggctggtgagcctggtctcccgggggtggatggaatgcacggt
cttccaggtgtgaaaggtgctaaaggttcctctggaattggaggtttcaaaggtgcgata
ggcgtcagagggtggccagggcagaacggaatcaaaggagaggctggcttcactggcttg
ccaggggttcgaggtttacctggtgactcgggattgaaaggtgaccgtggtgaccgtggc
ccaccaggatcacctcctaaaatcatgccaagtatgatgcttgatgtgaaaggcgaaaag
ggaaatgaaggagaaagtggtgcccaagggagctttggtttcaaaggcacaaaaggagca
ctaggctaccctgggcagacaggaaggccaggttcacctggctttccaggttatgaaaaa
ggtcagaaaggtgactatggaattaaaggaataaaaggcatatcaggatatataggtgtc
tcaggaggtcgtggtatttctggtttccctggagcaacgggaaggaggggggaaaaggga
attccagggattgatggtatttttggcgaaagtggccagcctggggaaattggtgattgg
ggagatactataaacttgccaggaagagcaggttcgaaaggagatgctggcataactgga
gccaaaggggtagaaggagccaaaggaggaaaaggtgatgctggtgttccaggttttcct
ggcattcagggcatgaggggctccccaggctcccctgggttgcaagggcaaagaggattc
ccagggcaggttggcgaacaaggtttatctggagatccaggatttcctggatcatcaggt
gaaaaaggaagttctgggtggattgggcttccagggagtaaaggtgctgctggcgccaga
ggaatcactggattacatggtttgccaagtaccaagggctttccaggatcaccaggtcca
gatggatatggcccaccaggtttcccaggtatttggggtgacaaaggtaccgtgggagag
ccaagcccaattgaaggcagcagaggagctcctggtccgaaaggagaaagaggagatcta
ggacagagaggctcacctgggagccctggacctgagggaagaccaggccttcctggagtt
tcaaacatatctggagcacctggtgatgtgggatcaccaggtttggatggtgtgccaggc
tacccaggaccaccaggaccaccaggaatagctgctccacctggaagcaaaggagaagtg
gggcagatcggcataattggagaagatggttcaaaaggacttagaggagaccatggcgca
gatgggagacctggaattccagggttccctggggcaaaaggatataaaggggaacaagga
gtcatgggttttgttggcatattgggaacgcctggtgactttggccccactggacccaaa
ggagaccgaggatttcctggatttcagggacctccaggttcccctggactgcctcctgtc
cttcctaaactggtttcagaacaagggagcccaggtgctcctggaaacagagggcttcct
ggcacgttgggtgagatgggtcctcaaggcccaccaggatctccaggttctagaggcccc
atgggtaaacaaggtctgcaaggaagagggggaatacctgcagctccaggcttcagaggt
gatcaagggagaacaggactgcagggcccagggggctttgaaggtgcagcaggtgatcca
ggtactcctgggctgccaggtatgcccggccgcagcatcaatatgggatatcttttggtg
aagcacagccaggcggatcaagagcccatgtgtccagtgggcatgagcaaactctggagt
ggatacagcttgctctactttgaaggacaagataaggcacacaatcaggatctaggtcta
gctggttcatgtttgactcgattcagcactatgccttttctttactgcaatcctggggac
gtctgctattatgcaagtcgcaatgataagtcttattggctctcaacaacagcccctctt
ccaatgatgcctgtacaagaagaagaaatccgaccttatatcagccgttgctccgtctgt
gaagcgccggctgttgccatagccattcacagccaagatgccactattccacactgtcct
gaaggatggcgcagcttgtggatcggctattccttcctcatgcacactgcagctggtgcc
gaaggtggtggacagtcactcgtgtctccaggtagctgtttggaagacttccgagcaaca
ccattcatcgaatgcaacggtgctcagggaacctgccactactttgcaaacaaatacagt
ttctggcttaccacaattgacaatcaatttcaacactccccttcagcagatacactcaag
gctggactcatccgaacacacatcagccgatgccaagtgtgtatgaaaaatttgtaa
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integrated database retrieval system
