Podarcis muralis (common wall lizard): 114594272
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Entry
114594272 CDS
T06059
Symbol
SCAF8
Name
(RefSeq) protein SCAF8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmua03021
]
114594272 (SCAF8)
03041 Spliceosome [BR:
pmua03041
]
114594272 (SCAF8)
Transcription machinery [BR:
pmua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114594272 (SCAF8)
Spliceosome [BR:
pmua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114594272 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
Mucin
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
114594272
NCBI-ProteinID:
XP_028579562
LinkDB
All DBs
Position
3:68203052..68272836
Genome browser
AA seq
1325 aa
AA seq
DB search
MEAVKAFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLPGTTATMSNNTPGTPVTPATPANVVQSLPDPWV
SQITNTDTLTAVAQILQSPQGQQLQQLIQTLQMQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAAAAANTLNPLEQSVSFNKKLMDRFSDFGEEADINEEPKKETQTSQMPLVSESVNNS
LFHQLAEQLQQQNLEHLRQQLLEQQPPKASPEETQEGNFGSEHSASPSQDSSHQQFLEVE
TNIDNSMDVQQQDMDIDEGQEVVEQEVFEQEEKKPVVPSRSRTRSRSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKI
GSKIIKIAWALNKGVKTEYKQFWDADVGVSYIPWEKVKLDDLDGFAEGGMIDQETVNSEW
ETARSSETTKEPVQTTQTTTVDKTTAVTTQTETYTQSVTMLQIPVAPSVPAVSLVPPTFP
VTMSVPPPGYSPIPPPPFMRASFNPSHPPPGYLPPPVPPPVPPPVVPTPLVQSSLPIAQE
SMKDYSNLALPVGTVSSSLTTPTLSSGSVFTPLSSNKSDLDEKGSHLADLQISSSENRAV
PDDVSSSSGLTGGMQPPSVSTSSGLVGGIQPPSVSSSSGLVQPASVSSSSGHLTRVQPPN
ASSNSGLLTGVQPPSVSSSSGLLAGLQPMTVSSSSSLLMGLQPPIVSSNSGLLSGVQPPI
VSSSSGLLAALQPPIVSSNSGILGLPPPIVSSSSGLLGLPPPNISSGSGLLGLQPHAGIQ
NVPHLTIASQRLPGMPLVDIRSGLMPQPPGPRFPLLQPGIPLQHSIPPPAILDPSLPPPR
AFLSGDLFTQTERPFGTTGRQSVDNMSNPDKRLALGDDSIQQEGDRDYRFPPVENRENIN
RTSSVDMRDSVGRPPLDPRESLGRPPVDGREHLARPHIDLRENFGRPGMEGLGRRDHFAF
NSDKHWGQRGDFDEREHHSFPTFGGLKGFQEDRERYRQTNYRFENRSGPAWNRGLEQDTH
RDFDDRRRPWERQRDRDDRDFNFGREINGNRFGRERIQNNWIPPPHPRAFEFFEGGTSQQ
KTDSVPQVNGENAETESQPPAAQVQGEPELYEKLATSSDTKKEKSDTEAELESEPVVEST
ETEGT
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaagccttcaacagcgagctctactcgctgaatgactacaaacctcct
atttcaaaggctaaaatgacacagattactaaggcagcaatcaaggctataaagttctac
aagcatgttgtacaaagtgttgaaaaattcatacaaaagtgtaaaccagaatacaaggtg
cctggcttatatgtcattgactctattgttcgacagtctcgacatcagtttggacaagaa
aaggatgtgtttgctcctaggtttagcaataacataattagcactttccagaatttatac
cgttgccctggggatgacaagagtaaaattgtgagagtgctaaatttgtggcagaagaat
aatgtgttcaaaagtgaaattatccagcctctattggatatggcagcgggaattcctcct
ccagtcgtgacccctgtcttgcctgggacaactgctactatgagtaacaatacaccagga
acgcctgtgacacctgctacaccagccaatgtggtccaaagtttacctgatccttgggtg
tctcagataactaatacagatactcttactgctgtagcacagatcttgcaaagtccacaa
ggccaacagcttcaacaactaatacagacactgcaaatgcaacagcagaaaccacagcca
tcattacttcaagcactggatgcaggtctcgtcgttcagttacaagccctcactgcgcaa
cttacagctgctgccgctgctgccaatacacttaacccactagaacagagtgtctctttt
aacaagaagctgatggataggtttagcgattttggtgaagaagctgacattaatgaagaa
cctaaaaaagaaactcaaacttcccaaatgcctcttgtatctgaatctgtgaacaactca
ctttttcaccaactagctgaacagttacagcaacaaaacctagaacatctccgccagcag
cttctggagcagcaacctccaaaggcaagtcctgaggaaacacaagaagggaattttggt
tctgagcattcagcatcaccttcacaagacagcagccaccaacagtttttagaagtagaa
acaaatattgacaattcaatggatgttcaacaacaggacatggacatagatgaaggtcaa
gaagttgtagaacaagaggtatttgagcaagaggaaaagaaacctgtagttccttcaaga
tcaagaacacgttcaagatcccgctcaaggtctccaagaaaaagaaggtccagatcacga
tctggctctagaaagcgtaagcatagaaagcgctcgcgctctagatcaagggaaaggaag
aggaagtcctccaggtcctactcaagtgaaagaagagctagagagagggaaaaagaacga
cagaaaaaagggttgcctcctatacggtcaaaaacactaagtgtctgcagtactacactt
tgggttggtcaggtggacaagaaagccacccagcaagatttaaccaatttatttgaagaa
tttggacaaatagaatctataaatatgatccctcccaggggctgtgcgtatgtctgtatg
gttcatagacaagatgcgtatcgtgctcttcagaaactaagctctggatcctacaagatt
ggatctaaaattattaagattgcatgggctttaaacaaaggtgtgaaaactgaatacaaa
caattttgggatgcagatgttggagtttcatatataccttgggaaaaagttaaattggat
gatttagatggctttgcagaaggaggcatgattgaccaggaaacagtaaatagtgaatgg
gaaactgcaagaagctcagagaccacgaaagagcctgtgcaaacaacccagactacaaca
gttgacaagaccacagccgtaacaacccaaacagaaacttacacgcagtctgtcactatg
ctacagattcctgtagctccatctgtgccagcagttagtttagtaccaccaacatttcct
gttacaatgtctgtccctcctcctggctatagtccaattcctccacctcccttcatgaga
gcaagcttcaatccttcacacccacctcctggttatttgcctcccccagttccaccacct
gttccaccgccggtagttccaacccctcttgtacagtcttcgctaccaattgctcaagag
tcaatgaaagattatagcaaccttgctctaccagttggcactgtttctagtagtcttact
accccaactttatcttctggaagtgtttttactcctctgtcaagtaacaagtcagattta
gatgaaaagggatcccatcttgcagatcttcagatttcatcaagtgaaaacagagctgtt
ccagatgatgtttcaagcagttctggacttactgggggaatgcagccaccaagtgtctca
accagttcggggcttgtagggggaatacagccacctagtgtctcaagtagctctgggctt
gtgcagccagccagtgtgtcaagcagctctggacatttgacaagagttcagccacctaat
gcttcaagcaactctgggcttttgacgggtgtccagcctccaagtgtctcaagcagctct
ggacttctggcaggactccagcccatgactgtctcaagcagctccagccttctaatggga
ctccagccacccatagtgtcaagtaactctgggcttttgtcaggagtccagccacctatt
gtgtcaagtagttctgggcttttggcagcactccaaccacctattgtatcaagcaactct
gggattctaggattgccaccaccgattgtctcaagtagttctggactattaggattacca
ccaccaaatatttcaagtggctctggacttttagggttacagccacatgctggaattcaa
aatgtaccccatttaactattgctagtcaaaggttgcctggaatgcctctagtagatatc
cgctcaggactaatgccacagccccctgggccacgatttcctctcctgcagcctggaata
ccactacagcatagcattcctcctccagcaatccttgacccatcccttcctccgcctaga
gctttcctttcaggagatttgtttactcaaacagagagaccatttggaactaccggtaga
caaagtgttgataacatgtctaatccagataaaaggttggcacttggagatgacagcatt
cagcaagaaggagatagagactatcgctttcctccagtggaaaatagggagaacattaat
cggacctcttcagtggatatgagggattcagttggaaggccaccactagatccaagagaa
agtctaggaagacctccagtagatggaagagaacatcttgccaggccacacatagattta
agagaaaactttggaagaccaggcatggaaggacttggtaggagagaccattttgctttc
aattcagataagcactggggacaaagaggagattttgatgaaagagagcatcattcattt
cctacatttggtggtcttaaaggcttccaggaagaccgagaaaggtatcgtcaaacaaac
tacagatttgaaaatcgaagtggcccagcttggaaccggggacttgagcaagacactcac
agagactttgatgatcgccgaagaccttgggaaaggcagagggacagggatgacagagat
tttaattttggcagagaaattaatggaaacagatttgggagagagagaatacagaacaac
tggataccccctccacatccaagagcatttgaattttttgaaggtggcacatctcaacaa
aagactgacagtgtgccccaagttaatggtgaaaatgcagagacagagagtcagccacct
gcagcgcaagtacagggtgaaccagaactttatgaaaagctggcaacttcaagtgacaca
aaaaaagagaagagtgacacagaagctgaattagaaagtgaaccagtggtagaaagcaca
gaaactgaggggacataa
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