Podarcis muralis (common wall lizard): 114595761
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Entry
114595761 CDS
T06059
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114595761 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114595761 (PAN3)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114595761 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
114595761 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
Torus
Motif
Other DBs
NCBI-GeneID:
114595761
NCBI-ProteinID:
XP_028582232
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All DBs
Position
4:27203167..27266982
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AA seq
895 aa
AA seq
DB search
MNSGGIPCSSPVVAAAAAAVAAAAVGPPPGPAAAAAPVGVKLKFCRYYAKDKTCFYGEEC
QFLHEEPGGASAACPGPPPPVALGGLPLGLPPVPAAPAVAASPGHVGGYSGHGAAAPVAG
PKKPPELLGGGAGCGHGGAGGGAGLDGPRLAIAGMDGGALAEASLTDSYFSTSFIGVNGF
GSPAEAKYPMMQRITNSSSSPSLLNDSAKPYAGHDSLTSPGSSLFNDFAALSLSQRRKPR
KYRLGMLEERIVPVGSKARKSKNTIGCLADRCKTGVPINMVWWNRVTENNLQTPNPAASE
FIPKGGSTSRLSNMSQSNISAFSQALFSHPSMGGPANAGLAPGMSLSAGSSPLHSPKITP
HTSPAPRRRSHTPNPANYMVPTSASTPVTNAVSQPPAAGQVIQKETVGGTTYFYTDTTPA
PVTGMVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPA
VPTEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNT
KCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSADAY
FTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILVTGK
TRLRVNCVGVFDVLTFDNSQNNPLALMAQYQQADLISLGKVVLSLACNSLAGIQRENLQK
AMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLA
KEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTETGTPWIDL
SHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcgggatcccttgctcctccccggtggtggcggctgccgcggcggcggtg
gcggctgcggcggtggggccgccccccgggccggcggcggcggcggctcccgtcggggtg
aagctgaagttctgccgctactacgcgaaggacaagacgtgcttctacggcgaggagtgc
cagttcctgcacgaggagcccggcggagcttcggccgcctgccctgggcctccaccccct
gtggccctcggcgggctcccgctcgggctccctccggtccccgctgccccggccgtggcc
gcctcgcccgggcacgtcggcggctactccgggcatggggcagcggcgcccgtggcgggg
cctaagaaaccccccgagctcttgggaggaggcgcaggatgcggccacggcggagcaggc
ggcggagcggggctggacgggccccggctggccattgcaggcatggatggaggtgccctg
gctgaagctagtcttacagactcctacttcagcaccagcttcatcggagttaatgggttt
ggaagtcctgctgaagcaaagtatcctatgatgcagaggatcacaaatagcagcagttcc
cctagccttcttaatgacagtgccaagccctatgcaggccacgattctcttacttcacct
ggttcatccttgttcaacgactttgctgccctcagcttatctcaaaggagaaaaccaagg
aagtatcgactggggatgctggaggagagaatagttccggtgggatcaaaggcaagaaaa
tcaaagaacactattggctgcttggctgacaggtgtaaaacaggagtacccatcaatatg
gtttggtggaacagagtcacagaaaacaatttacagacaccaaatcccgcggcaagcgag
tttattcctaaaggaggatcaacctcccgactcagtaatatgtcacagtcaaatatatct
gccttctctcaagccttgttctctcatccttccatgggaggtcctgcaaacgctgggcta
gctccaggaatgtcattgtcagcaggatcttctccccttcattcccctaaaattactcct
cacacgtctcctgctcctagacgaagaagtcatacaccaaacccagcaaattacatggtg
cctactagtgcctctacgccagttactaatgctgtctcccagccgccagctgctggccag
gtgattcagaaggaaactgtgggtggcacaacctatttctatactgacacaactccagca
cctgtaactggaatggtgttcccaaattaccacatttatcctccaactgcgcctcatgtt
gcttacatgcagccaaaagcaaatgcaccttctttcttcatggcagatgaactcagacag
gagctgatcaacagacacttaattacaatggctcagatagatcaagcagatatgcctgct
gtcccaacagaagttgacagctaccacagccttttccctctggagccactgccaccaccc
aatcggatacagaaaacaagcaactttgggtatataacatcatgctacaaagctgtaaat
agcaaagatgatctgccatattgccttcggaggatacatggttttcgtcttgttaacaca
aagtgcatggtgctggttgacatgtggaaaaaaatccaacactcaaacattgtcacattg
cgagaagtattcaccactaaagcatttggagaacattctcttgtgtttgcctatgacttc
cacgctggaggagagactatgatgagcagacacttcaatgatcctagtgctgatgcctat
ttcacaaaaaggaagtggggtcagcatgatggacctttgcctcggcaacatgcggggttg
ttgccagaatccctgatttgggcctacattgtgcagctcagctctgcattgcggaccatt
catacagcaggattggcctgtcgggtgatggaccccaccaagattctggtaactggaaaa
acaaggttgcgagtgaactgcgttggagtctttgatgtgttaacatttgataacagccaa
aacaatcccctggccctcatggcccagtatcagcaagcagacttgatctcccttgggaag
gtggtgttgtctttggcttgcaattctctggcaggaattcagagggagaatttgcagaaa
gcaatggaactggtgacaatcaactattcctctgatttgaagaatcttattttgtatttg
ctgactgaccaaaacaggcttcgaagtgtaaatgatatcatgcctatgattggtgcaaga
ttctatactcagttggatgctgcccaaatgagaaatgatgtaatagaagaagaccttgca
aaggaagttcagaatggaagattatttcggcttcttgcaaaattgggaacaatcaatgag
aggccagaatttcagaaggacccaacatggtcagaaactggagacagatacctcctgaag
ctgtttagggatcatctttttcatcaggtgacagaaacgggcactccttggatagacctc
agtcacattatctcttgtcttaacaagctagatgctggtgtgccagaaaaaataagcctc
atttccagagatgagaagagtgtacttgtggtgacgtatagtgacctaaaacgctgcttt
gaaaatacttttcaagaactgattgcagccgcgaacggccagttgtag
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