Podarcis muralis (common wall lizard): 114596437
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Entry
114596437 CDS
T06059
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03013
Nucleocytoplasmic transport
pmua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114596437 (UPF3A)
03015 mRNA surveillance pathway
114596437 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114596437 (UPF3A)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114596437 (UPF3A)
mRNA cycle factors
P-body specific factors
114596437 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
114596437
NCBI-ProteinID:
XP_028583861
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All DBs
Position
4:complement(80213941..80228800)
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AA seq
482 aa
AA seq
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MEAPLQRESPRRVPETPPTSPGPPPPPPPPLPPPPLPPPPSSLPPLPGKPQREEKRAALS
KVVIRRLPPSFTKEQLEEQLHPLPAHDYFEFCTSDPSLYPHLYSRAYINFRNPDDILLFR
DRFDGYVFIDSKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCAEE
EKICANPETLLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRESEKKR
LREDEKRKRREEERRKRKEAEKQKKMAEKEIRIKLLKKPEKGDEQATEKHREKEKADIDE
SKWEKSPGHGSIKSKPLEGSLKELKEKSQNDSDKEQRDSERRFREKEPERQRYRLDDSRK
HRSHYEFDKFVRRNEDEVKWGKGYSQDRGKKVNYNYSFTVDTVDKLGKEDKCDDMASKKE
RIRNKDRPAMQLYQPGVRIRTHTGSTSRSYDCTEKSSEEAYDRKYEADNSPGGGSEKSEE
AE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggaggctccgcttcagcgggaatccccgcgtcgggtaccagagacccctccgacgtcc
ccggggccgccgccccctcctccgccgccgctcccgccgcccccgctgccaccaccgcca
tccagcctgccgccgctgccgggcaaaccgcagcgggaggagaaaagagcggctctgagt
aaagtagttatacggcggctacctcctagctttacaaaggagcagctggaggaacagcta
catccacttcctgctcacgattattttgaattttgtacctctgatcccagtctttatcct
catctctactcaagagcatatattaattttagaaatcctgatgacatccttctttttaga
gatcgctttgatggctatgtcttcatagacagtaaaggtttagaatatccagctgttgtt
gaatttgcaccattccaaaagatttctaaaaagaagctgaagaagaaagatgcaaaagct
ggaagcatagaagatgatccagaatacagaaaatttttagaaagttattgtgcagaagaa
gaaaaaatatgtgctaaccctgagactctgctgggagagattgaggcaaaaacaagagaa
ctcattgctagaagaacaacaccacttttggaatatattaaaaatagaaaattagaaaaa
cagagaatccgagaagagaaaagggaagaacgaaggagaagagaatcagaaaaaaaacgc
ctaagggaagatgagaagcggaagcgcagagaggaagaaaggcgtaaaagaaaagaagct
gaaaagcaaaagaaaatggctgaaaaagaaataaggatcaagcttcttaagaaacccgag
aaaggcgatgagcaagccacagaaaagcacagagaaaaagaaaaggctgacatagacgag
agtaaatgggagaaatcacctgggcacgggagtataaaatctaagcccctggaaggttcg
ctgaaggaacttaaggaaaaatctcaaaatgatagtgataaagagcaaagagattcagag
agaagatttcgtgaaaaagaacctgagagacaaaggtatcgactggatgatagccgaaag
cacagaagtcactatgaatttgacaagtttgtgagaaggaatgaagatgaggtgaagtgg
ggaaaaggatacagccaagatcgagggaagaaagtgaactacaactacagcttcactgtg
gacacagtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaaaaggag
cgcataagaaataaggatcggccagccatgcaactataccagccaggagttcgcattcga
acacatacggggtctacaagtaggtcctatgactgcactgaaaagtcttcagaagaagct
tatgatagaaagtatgaagcagacaattcacctggaggtggctctgagaagagcgaagag
gcagaataa
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