Podarcis muralis (common wall lizard): 114600906 Help Entry 114600906         CDS       T06059                                  Symbol COL18A1 Name (RefSeq) collagen alpha-1(XVIII) chain   KO K06823   collagen type XVIII alpha Organism pmua  Podarcis muralis (common wall lizard) Brite KEGG Orthology (KO) [BR:pmua00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pmua04147]     114600906 (COL18A1)    00535 Proteoglycans [BR:pmua00535]     114600906 (COL18A1)    00536 Glycosaminoglycan binding proteins [BR:pmua00536]     114600906 (COL18A1) Exosome [BR:pmua04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    114600906 (COL18A1) Proteoglycans [BR:pmua00535]  Extracellular matrix (ECM) proteoglycans   Basement membrane proteoglycans    114600906 (COL18A1) Glycosaminoglycan binding proteins [BR:pmua00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    114600906 (COL18A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Endostatin Collagen Collagen_trimer DUF959 Laminin_G_3 DUF1554 Laminin_G_2 Motif Other DBs NCBI-GeneID:  114600906 NCBI-ProteinID:  XP_028593574 LinkDB All DBs Position 1:complement(83306506..83403147) Genome browser AA seq 1583 aa AA seqDB search MARAELSIGLLLLLTCCLSNAQGWSWLWGGSKEETLPPTEAAGTTEEQTAQQLATPEAAT LNTPLEITTQQKGRVWTIFTLKRPDLTAATTIPTATSSSELESREGNIAGVGAEILNVAE GIRNLVQLWDEKTTTGTERTEAPATADLLTAAPTPVTEAVSIQNATANSTGNVQTSLEAG QPELVLSVTTKPAVLWNKTKVLLKKPETPPPENFSTEVGLLELIGDPPPDQITKVYGPDN SPGYVFGLDANTGQVARYHLPSPFYRDFSLLFHVQPTTDKAGVLFAITDASQSIIYVGVK LSEVKDGKQQIIFYYTEPGSQNSYAAAAFTVPSLVNQWTRFAISVEDEEVVLYVDCEEFE RVRFERSPDEMELEDGSGLFVAQAGGADPDKYQGVIAELKVKGDPRAADVQCEEDDDDSD MISGDGGSGAEERPQPSEKEKVKVSLSSLPEPPPVTSPPIAKKPTQPEEKLHLQTELTKL EEGPPLSSGVGVKGEKGDPGEKGERGTKGDSGVGGVLPTNGAKGEKGEKGELGVKGNAGF GYPGAKGQKGEPGDQGSPGPAGPPGPPGTIVQRPDGSVVEQVAGPPGPLGPPGLPGKDGL PGKDGEPGDPGEDGKPGDVGPQGFPGTPGEPGQKGEKGDAGIGPRGSPGPPGPPGQPGFS SKLDKLTFIDMEGSGFGGDLETLRGPRGQPGPPGPPGVPGLPGQPGRIGTDGSDLPGPPG LPGVPGRDGSPGPPGPPGPPGSPGKDGIAGQPGLNGASGEPGELGLPGAPGPKGSKGDAG LPGAPGETGLAGLPGPMGPRGQPGPPGPPGPAFGPGFDDMEGSGLPLVSAVPGARGPEGP QGEPGELGLPGAPGPKGDVGSPGLPGLPGVKGDPGLAGLDGRPGLEGFPGPQGTKGDTGD PGPKGERGQDGIGLPGPPGPPGPPGQVILLPSDDKTLPTLPGPEGKQGHAGFPGPVGPKG DIGSAGVPGSSGPKGEKGEPGVIIGPDGTVIATNPKGEKGEPGLQGPVGPAGPPGRHGQK GEIGFPGRPGRPGMNGLKGEKGDPADASGGLGLRGPPGLPGPPGPPGPPGSIVPIYDNNA FGEVGPPGPPGLPGYHGSAGPKGEKGDVGPPGPPGQFPYDLSRFGSTFRGERGDRGDPGL KGEKGEPGGGGLFGSSAVGPPGPPGYPGLPGPKGDSIRGAPGPPGPQGPPGAGFEGRPGT PGPPGPPGPPGPPSFPGPHRQSISIPGPPGPPGPPGTPGTSDASSSGLRILPTYQTMMGR AHEVPEGQLLFIRDREELYIRVRSGFRRVLLEERISISGPGLDNEVYDRPPNVHYSHGGT ASSSGSQRPFQQHLPVHSHREYSAYSTAKPWRGDESVANQHRLPEQPAIHQPHQGAQHQQ EPLNAFFLNRQPDAVPSAVHTHHDFQPALHLIALNTPLSGSMRGIRGADFQCFQQAREVG LTGTFRAFLSSRLQDLYSIVRRADRGTVPIVNLRDELLFNNWENLFSGTDAPFRTGVRIF SFDGRDVLRDSAWPQKSVWHGSDSKGRRLTESYCETWRTDDTVVTGQASSLASGKLLEQK SSSCKNAFIVLCIENSFMTSSKK NT seq 4752 nt NT seq  +upstreamnt  +downstreamnt atggctcgagctgagctcagcattgggcttctgctcttgctgacctgttgcttatccaat gcacagggctggagttggctgtgggggggttcgaaggaagaaaccctcccacccacagaa gctgctggtactactgaggagcagacggcacagcaacttgccacgcctgaggctgccacc ctgaacaccccccttgaaatcactacccagcagaagggaagagtgtggactatattcacc ctgaagaggccggacttgactgcagccacaacgatccctacagctacatcatcttctgag ctggaaagcagagaaggaaatattgcaggggtaggggctgaaatattaaacgttgctgag ggaatcagaaatttggttcagctctgggacgagaagacaaccacagggacggagaggacc gaggcacctgcaacagctgatcttctgacagcagctcccacccctgtgacggaggcagtg agcatccagaatgctactgccaactctaccggcaatgtgcagacctccctggaagctggg cagccagagctggttctctcagtgactacaaagcctgctgttctctggaacaagactaaa gtcctcttaaagaagcctgagactccacccccagaaaacttcagcacagaagttggcctc ttggagctgattggagatcccccaccagaccagataaccaaagtgtatggcccagacaac agccctggctatgtgtttggactggatgccaacactggacaagtggcacgttaccacctc cccagcccgttttacagagacttctcgctcttgttccatgtgcagcccaccacagacaag gcaggggtcctttttgctatcacggatgcctcccagtcaatcatttatgttggcgtgaag ctatcagaggtgaaagatgggaaacagcagatcatcttctattatacggagcctggctct cagaactcctatgccgctgctgcattcacagtgccttccctagtcaatcagtggactcgc tttgccatcagtgtggaggatgaggaagtcgttctctatgtagactgtgaggagtttgag cgggtccgttttgaacgctcgcctgatgagatggagctggaagatggctcagggcttttt gtggcacaagctggaggagctgatcccgataaataccagggtgtaattgcagaattgaaa gtgaaaggagatcctcgcgcagctgatgtccagtgtgaggaagatgatgatgattctgat atgatatctggagatggtggaagtggagctgaagaaaggccgcagccgtcagaaaaggaa aaggtaaaggtatcactctcaagtctgccagaaccaccacctgtcacctctcccccaatt gccaaaaagcccacccagccagaagagaaactccacctgcaaactgaattaaccaaacta gaagaggggcccccattgtcttcaggagttggagtcaaaggagaaaaaggagaccctggt gaaaaaggtgaacgtggcacaaaaggggactctggagttggtggagttctgccgacaaat ggtgctaaaggcgaaaagggagaaaaaggagagctgggtgtgaagggaaatgccggcttt ggatatccaggcgcaaaaggacagaaaggggagcctggtgaccaagggtctcctggccct gctgggcccccaggcccccctgggaccatcgtgcagcgccctgacggttctgtggtggag caggttgctgggcctccaggacccctggggccaccagggctgcctgggaaagatggcttg cctggaaaggatggagagccaggagatcctggtgaggatggtaaaccaggtgatgttggc cctcaaggattccctgggacgccgggagagcctggccagaaaggtgaaaagggtgatgca ggcattggtccaagaggttctcctgggccaccagggccacctgggcaaccaggattcagt tcaaaactggacaagttgacatttatcgatatggaaggctctggttttggaggggatttg gaaaccttacgtggccccagaggacaacccgggcccccaggaccacctggtgtgcctggc ttgccaggacaacctggaagaattgggacggatggcagtgaccttccagggccccctggc ctccctggagtgccaggtcgagatggcagcccaggacctccagggcctcctggccctccc ggttctccaggaaaagatgggatagctggccagcctgggctgaatggagctagtggagaa ccaggagaactaggcctcccaggagcacctggacctaagggcagtaaaggagatgcaggg ttgccgggagcaccgggtgaaactggcctggcaggccttcctgggcccatgggtccccga ggacaacctggtcctcctggcccacctgggccagcctttgggcctggatttgatgacatg gagggctcagggctgccgttggtttctgctgttcctggagcacgtggaccagaagggcca cagggagaaccaggagaactaggcctcccaggagcacctggacctaagggtgatgtcggc agccctggtctcccaggtttgcctggagtgaagggagaccctggattggcaggtctggat ggtcgtcctgggctagagggtttcccgggaccacagggaacaaagggtgacactggagac ccagggcccaaaggtgaacgaggtcaagatggaatagggctgccaggtccccctggaccc cccggccctccaggacaagtcatcctcctgcccagtgatgataaaaccttacctactctg ccaggcccagagggcaaacaagggcatgctggcttcccagggccagtgggaccaaaaggt gacataggatctgcaggtgttccgggctcttcaggtccaaagggtgaaaaaggagagcca ggggttataattggtcctgatgggacagtcatagcaactaatccaaaaggagaaaagggt gaaccaggcctgcaaggacctgtgggaccagcagggccacctgggcggcatggacagaaa ggagaaatcggctttcctggaagacctggccgacctggtatgaacgggttgaaaggagaa aaaggtgacccagcagacgcaagtggagggctgggcttaaggggtcctccagggctccct ggccctcctgggcccccaggtcctccgggcagcatagtgcctatttatgacaacaatgca tttggtgaagtgggaccaccggggcctccaggattgcctggctaccatggttctgctggt ccgaagggagaaaaaggtgatgtgggtcctcctgggcccccaggccagttcccttatgac ctcagcagatttggctccaccttcaggggagaaagaggggacagaggggacccagggctg aaaggtgaaaagggtgagccaggcggaggaggattgtttggatcaagtgctgttggaccc ccaggccccccaggatatcctggtcttccgggccccaaaggggacagtattagaggggcc cctggccctcctggcccccaagggcctcctggcgcaggatttgaggggcgcccaggaacc ccaggacccccgggtccacctggccctccaggacccccttcctttccaggaccccatagg caatcgattagtattcctgggccaccggggccgccaggaccaccaggaactccaggcacc agtgatgcatcatcttctgggctgcgaatcttgccaacctatcagaccatgatgggcaga gctcatgaggtgccagaaggacagctccttttcatccgggacagggaagagctctacatc cgtgtccgcagtggtttcaggagagtccttcttgaggaaagaatatccatctctggccct gggctggacaatgaggtatatgataggcctcccaatgtccactactcccatggaggaacg gcttcatcatctggatcccagcgccccttccaacagcatttgcctgtgcattcccaccga gaatacagcgcctactccactgccaagccctggagaggggatgagagtgtggccaaccag caccgccttcctgagcaacccgccatccaccagccacaccagggagcccagcaccagcag gagccgctgaacgccttcttcctcaaccgccagcctgatgccgtcccttctgctgtccac acccaccatgacttccagcctgctctccacctcatagccctgaacactcccctgagtggc agcatgcggggcatccgaggagctgacttccagtgcttccagcaagccagggaggttgga ctgacgggcaccttccgagcgttcctctcctcccgactgcaagacctctacagcatagtg cgcagagcagacaggggcacggtgcctattgtcaacctcagggatgaattgttgtttaat aattgggagaaccttttctccggcactgatgctccattcagaactggggttcgcatcttc tcctttgacggaagggatgtcctgagagactctgcatggcctcagaaatccgtgtggcac ggctctgactccaagggacggcggctaacagagagctactgtgagacctggcggacagac gacacggtggtgacagggcaggcttcctcgctggcgtcgggcaagctgcttgagcagaag agcagcagctgcaagaatgccttcatcgtcctctgcattgaaaacagcttcatgacttct tccaagaaataa

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