Podarcis muralis (common wall lizard): 114601644
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Entry
114601644 CDS
T06059
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04510
Focal adhesion
pmua04512
ECM-receptor interaction
pmua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114601644
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114601644
09142 Cell motility
04820 Cytoskeleton in muscle cells
114601644
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmua00535
]
114601644
Proteoglycans [BR:
pmua00535
]
Extracellular matrix (ECM) proteoglycans
Others
114601644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
114601644
NCBI-ProteinID:
XP_028594816
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Position
8:complement(31557795..31608796)
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AA seq
690 aa
AA seq
DB search
MASFLGSLKFCLLLQTISFSVTQFQGPPGEPGPRGPPGPPGVPGADGIDGDKGPPGAAGS
PGAKGEPGLPGPDGPPGKPGIDGLTGAKGEPGPFGRPGPKGQTGLPGPPGLPGPGLKGSP
GSPGQVGLPGEIGALGSKGVRGPEGPQGPPGPPGKPGPVGRIQGVEGSADFLCPTNCPAG
PKGPQGLQGLKGHKGRPGALGEPGRQGRPGPKGDVGLSGEQGIPGPPGPQGLRGYPGMAG
PKGEIGPQGYKGMIGTIGAAGPPGEEGPRGPPGQAGEKGDLGARGFRGPQGGMGPKGGQG
LPGIDGKDGTPGIAGVKGSAGQPGLPGPPGHRGLAGLPGTPGTKGGPGQKGEPGGRGLAG
SSGAPGKLGEPGPQGEAGPQGIAGVKGDRGERGPVGPPGVQGKVGPKGEQGPPGIPGPQG
LPGVKGGKGFPGKIGPKGDIGDPGVEGLPGEKGEKGESGEPGPKGQQGVRGEPGFPGPTG
DAGAPGIRGFLGPPGPRGLPGERGVPGMPGTQGAPGRDTGDQHIIDVALKMLQEQLAELA
VSAKRDAIGGAGVMGPPGPPGPPGSPGQQGPHGHPGPRGIPGILGAVGQIGNTGPKGKRG
EKGEQGEPGRGHQGMPGPPGIPGLPGHPGQATNGKEGERGTPGVPGEAGRPGLPGPPGSP
GLCEAAACLGASAYASARLTEPGAIKGPSY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctagttttttgggcagcctcaaattctgccttctcctccaaaccatctctttctcc
gtgacacaattccaaggtcctccaggagaacctggaccacgagggcccccgggtccgcca
ggagtgccaggcgctgacggcattgatggcgataaaggcccaccaggagcagcagggagc
cctggcgccaagggagaacctggccttccaggtccagatggccctccggggaaacctggg
attgatggcctaacgggagcaaaaggggaaccaggaccttttgggcgacccggccccaaa
ggccagactggacttccaggacctccagggcttccggggcctgggctgaaaggatctcct
ggctctccaggccaggttggactccctggagaaattggagctctgggatccaagggggta
cgtggaccagaagggccacaagggcctccagggcctcctgggaaacctggccctgttggg
cgcatccaaggagttgaaggcagtgcagatttcttgtgtccaaccaactgcccagctgga
cccaaaggccctcagggattacagggcttgaagggacacaaaggccgtcctggagctctg
ggagagcctggcagacagggcagaccaggtccaaagggtgatgtgggcctctctggagaa
caaggcattcctggccctcccggcccacaaggtctcagaggatatcctggaatggcaggc
cccaaaggagagattggccctcaaggttataaaggcatgattggaaccattggcgctgca
gggccaccgggtgaagaaggacccagggggccaccaggacaggctggcgagaagggagac
cttggtgctcgtggtttcaggggccctcaaggaggaatgggaccaaaagggggacagggt
cttcctgggattgatggcaaagatggcaccccaggtattgctggggtgaagggaagtgca
gggcaaccaggtcttccagggcctccaggccaccgaggcttagctggcttgccaggcaca
cctggaaccaaaggtggcccaggacagaagggtgaaccagggggtcgtggcctggcaggc
tcatcgggggcacctgggaaacttggtgagccaggacctcaaggagaagcagggccgcaa
gggatcgctggtgtgaaaggagatcggggtgagagaggcccagtgggtcctccaggagtg
caggggaaagtgggtcccaaaggagagcagggccccccaggaattccaggcccacaaggt
ctcccaggagttaaaggtggcaagggctttccaggaaaaattgggcccaaaggtgacatt
ggagatcctggcgttgaaggccttccgggggagaagggagagaagggtgaatcgggtgag
ccaggaccaaagggacagcaaggtgtccgtggggagcctggttttcctggacctactggg
gatgcaggcgcaccaggtatcagaggcttcctaggacctccggggccccgagggctacct
ggggagcgcggtgtacctggaatgcctgggactcaaggtgctccgggcagggacacagga
gatcagcacattattgatgtggccttaaaaatgttacaagaacaattggctgagttagct
gtgagtgctaaaagagatgccataggtggggcaggtgtgatgggaccacctggacctcca
ggaccacctgggtcacctggtcagcaagggccacatggacaccctggccctcgaggcatc
ccaggaatcctaggagctgtaggacaaattggcaacactggacctaaaggaaagaggggc
gagaaaggggagcagggagagcccggccgtggacatcaagggatgccagggccaccagga
ataccaggtcttcctggacaccctggccaagccacaaatggcaaagagggagagcgaggc
accccaggtgttccaggagaagccgggcggcctggtttgcctggccctcctggttctcct
gggctctgtgaggcagccgcttgcctaggagcctcggcctatgcttcagcccgcctgact
gaaccaggtgctatcaaaggaccttcgtactaa
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