Podarcis muralis (common wall lizard): 114601851
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Entry
114601851 CDS
T06059
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114601851 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114601851 (CNOT1)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114601851 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114601851 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
114601851
NCBI-ProteinID:
XP_028595248
LinkDB
All DBs
Position
8:complement(38714737..38776943)
Genome browser
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIENPLHYQKSLKPSPHLFTQLSKVIK
LSKVQEVIFGLALLNSFNPDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIITQFGVGEVTAAQVARVLGMMART
HSGLADGIPLQSISAPGSGIWSDGRDKNDGTQSHTWNVEVLIDVLKELNPNLNFKEVTYE
LDHPGFQIRDSKGLQIVVYGVQRGLGLDVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAAGMAS
LSLGGSAVPHTQSMPGFPPNLSSAFSTPQSPAKAFPPLSTQNQNTPFSGIGGLSSQLPVG
GLTTGSLGIGTGALGLPAVNNDPFVPRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFTSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKTPLAGQVSTIVTTSTTTTTVAKTTITPVGRVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDISELKPGNLLKDKDRLKSLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDSTQPTGILAQPMKQAWATDDVAQIYDKCMAELE
QHLQSIPHTLSMNPQTQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELGERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELAKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactacagagccagccagcaggaaatacagcatattgtgaatcggcacggc
cctgaggcagacaggcatttactacgctgtctattctcgcatgtggatttcagtggcgat
ggtaaaagtagcggtaaagatttccatcagacgcagtttctgatccaggagtgtgcatca
ttgattacaaagccaaattttatttcgaccctgtcctatgctattgaaaatccattgcat
tatcaaaagagtcttaagccgtcaccccatttattcactcagctgagcaaagttatcaaa
ttaagcaaggttcaagaggttatttttggccttgctttgctaaactccttcaacccagat
ctacgaggttttgctgctcagtttattaaacagaaacttcctgatcttctgcgttcatac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ttgcacctcctcctatcccatcttctttttggacagaagggagcctttggggttggacag
gaacagattgacgcttttctcaaaacattacgtagagattttccccaggaacgttgccct
gtggtgcttgcaccactcctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagcaaaaacaatgatggagagctctcttgcagacttcatgcag
gaagttggctatggcttttgtacaagtgtggaggaatgtcgcaacatcatcacacagttt
ggtgtgggagaggtcactgctgcccaggttgccagggttttgggaatgatggctcgaaca
cactcgggattggcagacggcattcctttgcagtccatctctgctcctggaagtggaatt
tggagtgatggaagagataaaaatgatggaacacagtcccatacctggaatgtggaggtt
ctgattgatgtgcttaaagaactgaacccaaatttgaacttcaaggaagtaacctatgaa
cttgaccaccctggatttcaaattcgtgatagcaaaggcttacagattgtggtgtatggt
gtccagagagggctagggctagatgtcttcccagttgatctcatatacagaccttggaaa
catgcagaaggacagctctcattcatccagcattccctcattaatccagagatcttctgt
tttgctgactacccctgccatactgttgccacggatattttgaaagcccctcccgaggat
gacaatcgagaaattgccacatggaagagcctggacttgattgagtccctgttgcggttg
gcagaggttggccagtatgagcaagttaagcagctcttcagcttccctatcaagcactgt
ccagatatgttggtattggcattactacagatcaacacttcctggcatactttgcggcat
gaactcatctccacacttatgcccatttttcttggcaaccaccccaactctgccatcatc
ctgcattatgcatggcatgggcagggccagtctccttcaattcgccagctcatcatgcat
gctatggcagaatggtacatgcgaggggaacagtatgaccaagcaaaattatcacgtatt
ctagacgtggcccaagacttgaaggcgttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaactagacaaatgg
ctcacagataaaattcgggagcatggggagcctttcatccaagcctgtatgactttccta
aagagaaggtgcccctctatcttaggtggccttgccccagagaaagaccagcccaaaagt
gctcagcttcctccagagacactggcaactatgctggcttgcctgcaggcttgtgctgga
agtgtgtctcaagagctgtcagaaactattctaactatggtagccaactgcagcaatgtc
atgaacaaagccaggcagccaccacctggagttatgcccaaaggacgtccaccaagtgct
agtagcctagatgccatctctcctgtacagattgatccacttgctgctgggatggcatct
ctcagcctaggtggttcagcagttccacacacacagagtatgccaggtttccctccaaac
ttgagttctgcttttagtactccacagtcaccagcaaaagcatttccaccactttccaca
caaaaccagaatacacctttcagtgggattggcggactctcttcacagcttccagtaggt
ggtcttacaacaggtagtctgggcataggaactggggcccttggcctccctgcagtgaat
aatgacccatttgtgccaagaaaactgagtacatcaggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtatggccagaggcaaatcagcacttt
agcaaagagattgatgatgaagccaacagctattttcagcgtatttataatcacccaccg
catccaactatgtctgtagacgaggtgttagaaatgctacagaggtttaaggactccaac
attaaacgagaacgcgaagtatttaactgtatgctgaggaacttgtttgaggaatatcgg
tttttcccccagtaccccgataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacatatatggcgctgggcctggccttgcgctatgttcttgaa
gccttacgaaagccttttacatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttccattagtcac
tttatacagttccctcatcacctgcaggagtacattgaatatggacagcagtctagagat
cctcctgtgaagatgcaggggtcaatcaccacccctggaagtattgcacttgcccaggcc
caggcccaggctcaggttccggcaaaaactcctcttgctggtcaagttagcactatagtc
accacctctactaccactactactgtggcaaagactacaatcactccagtgggtcgagtc
agcttcaagaaggatgtgccaccttctattaatacaaccaacattgacaccctgttagta
gctacagatcaaacagagagaattgttgaaccccctgaaaacgtgcaggaaaagattgct
tttatcttcaacaatctgtcacaatccaacatgactcagaaggttgaggaactgaaagaa
acggtgaaagaggagttcatgccttgggtttcacagtaccttgtgatgaagagagttagt
attgagccaaacttccatagcctttattctaatttccttgacacacttaagaatccagaa
ttcaacaaaatggttctcaacgaaacctacagaaatatcaaggtgctactcacatcagat
aaagctgctgccaacttttcagaccggtccttgctgaagaacctgggtcactggctgggg
atgatcacactggctaaaaacaaacccatcttgcacacggacttggatgtgaaatcctta
ttgctggaggcttatgttaagggacagcaagaacttctgtatgtcgtgccatttgttgcc
aaagttttggaatccagtgtgagaagtgtggttttccggcctccaaatccttggaccatg
gctattatgaatgtattagcagagctgcaccaggaacatgacttaaaactgaatctgaag
tttgaaattgaagtgctctgcaagaaccttgcccttgacatcagtgaactgaaacctggg
aacctcctaaaagacaaagatcgattgaaaagtttggatgaacagctgtctgctccaaag
aaagatgtaaaacaaccagaagagcttccaccaattacgaccactactgcttctacaaca
ccagctaccagcaccacttgcacagctactgttcccccacaaccacagtacagttaccat
gacatcaatgtttactccctgggagggctagctccacacattacgctcaatccaacgatt
ccattgttccaggcccatccacagttgaaacagtgtgtgcgccaagccatagagcgtgca
gtccaagaacttgtacatcctgtggtggatcggtccattaaaattgccatgactacgtgt
gagcagatagtgagaaaggattttgcactagattcagaagagtcacgcatgcgtgtagcg
gcacatcacatgatgaggaatttgactgctggtatggctatgatcacctgtagggagcct
ttgttgatgagcatagctaccaacctgaagaacagctttgccactgcattgcgggcagcc
tcaccacagcagagggagatgatggagcaggcagcagcacagttagcccaagataactgt
gagttggcatgctgtttcattcagaagacagctgtagaaaaagcaggccctgaaatggac
aagaggctggccactgaatttgagctcagaaaacatgccaggcaagagggtcgtaggtac
tgtgatcctgtagtattgacttatcaggctgaacggatgccagaacagatcaggttgaag
gttggtggagtggacccaaagcagctagccgtttatgaagaatttgcacgcaatgttcct
ggtttcttaccaaccaatgactcaacccaacccacaggaatcctagctcagcctatgaag
caagcctgggcaacagatgatgtcgcgcagatctatgataaatgtatggcagaactggag
cagcaccttcagtccattcctcacaccctgtctatgaatccacagactcaagccttacga
agcctcttggaggctgttgttgtggctcgtaattctcgtgatgctattgcagcccttgga
ctgctacagaaggcagttgaaggtttgttagatgccaccagtggtgcagatgctgacctc
ctcctccgctaccgggaatgtcacttgcttgttttaaaagcactgcaggatggccgtgct
tatgggtctccgtggtgcaacaagcagattacaaggtgcctgatagaatgtcgagatgaa
tataaatacaatgtagaagcagtggagctactgatccgtaaccacctagttaacatgcag
cagtatgacctccacctggctcagtcaatggagaatggcttgaactacatggcagtggca
tttgcaatgcagctggtgaaaatcctcttggtggatgaaagaagtgttgctcacataaca
gaagcagatctgtttcacaccattgaaactttgatgagaattaatgctcactccagaggg
aatgcaccagaagggttgccccagctgatggaagtggtacggtccaactatgaagccatg
attgaccgtgctcatggagggccaaatttcatgatgcattctgggatctctcaggcctct
gagtatgatgatccccctggcctgagggagaaggcagaatatctcctgagggagtgggtg
aatctctaccactctgcagcagctgggcgtgacagcaccaaagcattctctgcatttgtt
ggacaggtagagcttggggaaagaaagatgcatcagcaaggaatcctgaaaactgatgat
ttgatcacacgattcttccgtctttgcactgaaatgtgtgttgagatcagctatcgtgct
caagctgagcagcagcacaacccggctgccaatcccaccatgatccgtgccaagtgttac
cacaacctggatgcctttgtgcgcctcattgcactgctggtgaagcactctggggaggcc
accaacacagtcaccaagatcaacttgctcaacaaggttcttgggatagttgtgggagtc
cttttgcaggatcatgatgttcgtcaaagtgaattccagcagcttccctaccaccgcatt
ttcatcatgttgctgttagaattaaatgctcctgaacatgtcctggaaaccataaacttt
cagacactcacagccttctgtaacacatttcacatcctgagacctacaaaagctccaggt
tttgtttatgcttggctagaattgatctcccatcggatatttattgcaagaatgctggca
catacaccacagcagaaggggtggcctatgtatgctcagctgttgatagatctgtttaaa
tatttggctcctttcctgaggaatgtggaacttgccaaacctatgcaaattctgtacaag
ggtactctgcgtgtgttgttggtcctgttacatgacttcccagaattcctctgtgactac
cactatggtttctgcgatgtgattcctccaaactgtattcagctaaggaatctgatattg
agtgccttcccacgtaatatgaggcttccagatcccttcactcccaaccttaaggtggac
atgttgagtgagattaatattgctccacggatactcaccaatttcactggagtgatgcca
cctcagttcaaaaaggatttggattcctacctcaaaacccgttctccagtcacgttcctg
tccgacttgcgtagcaacttgcaggtatcaaatgagcctggcaatcgctacaatatccag
ctgataaatgccctggtgctgtatgtaggtactcaagctattgcacatattcacaacaaa
ggcagcactccttccatgagtaccatcacccactcggctcacatggatatcttccagaat
cttgctgttgacctggacacagaaggtcggtacctcttcctaaatgcaattgccaatcag
ttacggtacccaaacagtcatactcactatttcagctgcaccatgctttacctatttgca
gaggccaacactgaagctattcaagaacaaatcaccagagttctgctagaacgactgatt
gtaaataggcctcacccatggggtctccttattaccttcatcgagctgattaaaaaccca
gcatttaagttctggaatcacgagtttgtccattgtgctccagaaattgaaaagttgttc
cagtctgttgcgcaatgttgtatggggcaaaaacaggcacaacaagtaatggaaggaact
ggagctagttag
DBGET
integrated database retrieval system
