Podarcis muralis (common wall lizard): 114604291
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Entry
114604291 CDS
T06059
Symbol
ALMS1
Name
(RefSeq) LOW QUALITY PROTEIN: Alstrom syndrome protein 1
KO
K16741
alstrom syndrome protein 1
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmua03036
]
114604291 (ALMS1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmua03037
]
114604291 (ALMS1)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
114604291 (ALMS1)
Cilium and associated proteins [BR:
pmua03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114604291 (ALMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
114604291
NCBI-ProteinID:
XP_028600135
LinkDB
All DBs
Position
9:complement(74559272..74632583)
Genome browser
AA seq
2933 aa
AA seq
DB search
MRTRASPRLGWLAREREEEKRAGGAERGGALSQPPPPLLPLLAPPDSLQLPTAMEGPEKE
EGQVPPIATTPPRQGPKEELLSQSSSGTQVSYVSGISLGEAIRHRSTANQEMKTWYQPHV
EIDTSNLPAALGRRLSQSSGTRDLTEFPSMEEGSITVAEDSRKQQAPNVTHTRLLEAEDS
RLSPNLPLMTTYSTQGRTFFNETLFQQTGTDFAPLRGTPDASNVASEESSSHLRMSEAVR
LAATDVSSDSSLLSDYFKLSQHPLAFSSMAPSNTSLGSCLSQHPLSFSGPTPREQAHHSE
QHTQHLDARTETLGSSDENLGIPGSQKQLNPQSATSLPPNESWGQDLFLLDSRVPAPVLL
EILEKEVGLSKHSGFLSSESSSGKSGKDPVENEMSPLMENVVLGERELETFAEPPGQERR
TVPECDSLNALSYSEGKHFRNTGNSEQLSPDISNVSFRGQRMGLGDSCLIPGISSNPFLS
KQELQHVSEAAFEEQKKLVPAFADAKLHVPAPHQPVFVAAEHGNIRNMVDIQMGDKSELM
HSDFSIEREHKDVGISPSFNEGSFILHLAHPVHHSTPGIFTTRSLTREVPAMTYPVKAVL
QSSLPCLHEEFSNNSCSNTFLPSVEEPRVPSLDDTCIPSAGEPLALQSGQASKDENSGGL
QVLYPLKGRIQSLPSLNFMEKVGAWNMSHSAERMSDALALHGSSGASPRQKAYSAIADSL
NRILLKQQSQADLKAGLAASFYGPNSMTNLHVYDKNPPQVLPLTRSQSENSVVALSREMP
RAEVGHETSHSEDLHPVEDKGRVSGASGVKQSDANIEDAHSQHYTAVLVSTVSSDEEIGE
SATGGNPDNFISSERVAELLREDASFLSGSQEKTDGCQDNTRELPGFLPCTNQISLGHFS
DVSPDSLNQRTSPGTGSCADLRLSSRQSSRRSSTRSSVVSGKLHGSLEEVFKTPYDREIN
IEERIPVYLHNLGIDQSPSSILTPFMPRGPVREIEFSPTELRTLKTSNDLLARRLQLSEG
DSASVIDALQSSFDSSIHGWPAPAGSHPGTDLPLPTEFSHQPSRDCFDQGSIVCHQLELH
TPTPEPREGTFESSAPPKTAEQSHVTPEWPSNIHSGEGRSPKCVQRLMDRFDSKELGVSQ
DQLSPSSLAHGKGEESVSQKISSSAVLLGGEEDCFFIGSETLKEIQKILAEAETRSPSRN
FKSASSISSTDLDSSLKQIKKMDGSGDSGLFKGSSPGIQRMWSWDETLARQSVHSYNVLP
KTASFTGSLKCDGQPAADVLSNDQILPEESMPPSQVTVEEHRTVKPVRRSEPEGCNSATV
NKSLPVFVDSAADSKLFTPKDLKELAATSSAGSLDSASNIWEEGQQVLQKTRKEMGGSHG
SGNSSSVDSLGIKVKNLLRCERPVLHTTQWGEGEKHNEHSQKQVSAGARVACSKGDLASQ
ESENGSSLDSLAARVKTLLEDERPVMHAAQILQSAEEEEEKAHAWVKLKLTLQPADAEAD
LNEEDRRMIEEIKRMQLLSARIAGNVKDGLRGNSYERISSCSSILKTDTELSKTSSDSEL
QKDIRIQDSQLAECPVIRAAQPRVVCGTDRGLPDDSEITSLTSDQSHVSDQPRTHSENLS
DSSHNVHTPLRIATDTSLQGLTGTTKAATGKEVSVSAQAKLAADTSSTESAKQITSITFA
SRKRTSSSRVPCASIPEASPLETQSISNEQLESSKLHVGTPQPCASASMTAVHAPDKSVE
FRPGGDGHRHAPMVVSKEAYPQEKSFASMENSQPICSDQKVHSVAENREETQTASQGFTG
IKRYDRPSVNTSDNKSNPGETVADPLRPFNPPQQKAKDVSQDVSRSFAGIPKPHFPTGKE
STLTKENKSASDQYLCRAEAMDTGSSSPLSTSSQDHISTTIPVSPSSPTRKALSGVHMTL
SPKHVELPLPSLIDAGAEKRRVGGFTSDPHPATLNDPSHSLEATSNFKPTERFTSTQDSA
YFPRSPTPDSHFKHSHVPVVAKPAPSQEPLEIRQIFPVTDRGRVPGSYWQSPEENLKTTA
SSQTERMSSDAITQITTESPERATYSAEIFVSNDSGDVEALRPSHRKSHEMLGTAAAPVS
HISVLNRQAGTPRLLPYKPPGSSEMYYVPCPKETLRLSRVRSETTMESSHSGSNDATPPK
FPAQALGSGDEIPPSPVAIKHREGIYSKRAVPKEAWTGGDAQEGVKGSPKVPNRLESVAA
THSVFRSAQFYLHHPVPLQHEIDFLAGNDALGQYAVQERPALPSKDIFQYDGTSRRGQAV
FSLHQPTGEERFSPPNFEPDYSVLEELRFNETLERGSPRKELQQPDVRKSGHKLSKGQLL
PSSQRSSLKEKRVADLPEMQSAPFTGSLDELWAKYLERQKQHQQRSPSGSSRSELSLVER
LDRLARLLQNPVRHTLVPVKDEDVCVQVEPKGKESKKISSQANKAYKGRVAIHSPRGKAE
ESPEDTSNTRLSKSRHCKVGSAAALYHMDRNLEQRRNSAILSDTSSEMRPVKDCSVLTDI
TSDSEVTQPETDTASRTEASVSVSTIDTERLIRAFGHDRVQVSPKLSQLYSAIRHQKTRS
EKYAKGSRKDRAADYQRTAHAEPKRKETQATDSFISSDSVSTLSSSLGPSPALSSKRSRR
MLNKAVQAGDFEIVNSATKKHTRDVGLTFPTPTPSQARLREDPESGTEGGEFAQLDGFLL
ESKGKQRRQHGRLLAEKKPRRNKPRWRQGVSWFVSAKDMKPDFRKGSSYVYDPDPSWFEA
VPDPKPWREPLREKNWQEEHSELQVCLMAPSRDVENKPPPTFVKMTLQESLALHRPDFIS
SSGERVKRLKLIMEERKLQSMLQGEREELFNAREERRSFHLPNRDYRAMQKRRAISKNEM
VQRSKRIYEQLPEVRKRREEEKRKSDYSTNRLKAQLYKMKVTNHILGRKVPWE
NT seq
8802 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgcgcgcttctcctcgactcgggtggctcgctcgggagcgggaggaagagaag
agggcggggggcgctgaaaggggcggagctttgagccaacccccccccccactgttgccg
ttactagcgccccccgactcccttcaactccccacagccatggaggggcctgagaaggag
gagggccaagttccccctattgcaacaacgccaccacgtcaaggtccgaaagaagagcta
ttaagccaaagcagcagtgggactcaggtttcatatgtcagtggcatctccttgggagaa
gcaatcagacatagatctactgctaatcaggaaatgaaaacatggtaccagcctcatgta
gaaatagacacaagcaacctgccagcagccttgggcagaaggcttagtcagagcagtggg
acccgtgacttgacagagttcccaagcatggaagaaggctcaattactgtcgccgaagac
tccagaaagcagcaagcacccaatgtgacacacacacggctgttggaagctgaggacagt
cgcctctctcccaacctcccactgatgacaacatactcaacacaaggccgaacattcttc
aacgagaccctctttcagcaaactggaacagattttgctcctttgagagggactccagat
gcttctaatgtcgcttccgaagagtcttcaagccatttgcggatgagtgaagctgtgcgg
ctggcagccactgatgtcagctcagactcttctcttctctccgattactttaaactgtct
cagcatcccttggctttcagcagcatggcacctagcaataccagccttggcagttgtctc
tcccagcatcccctttctttttctgggcccactcccagggaacaggctcatcatagtgag
cagcatacacaacaccttgatgcaaggactgaaaccttgggctccagcgatgagaatttg
ggaatcccaggttcacagaagcagctaaatccgcagtcggcaacgtctcttcctccgaat
gagtcttggggacaggatctgttccttttggacagccgtgtgccagcacctgtcctcctt
gaaattctggagaaagaggtggggctatccaagcattctggcttcttatcttccgagagt
tcgtctggcaaaagtggaaaggatccagttgaaaacgaaatgagccccctaatggaaaat
gtagttcttggggaaagggagttggaaacctttgcagaaccacctgggcaagaaagaaga
actgttcctgagtgtgattcgttgaacgcactctcttattcggagggaaagcactttaga
aataccggtaattcagaacaattatctccagacatttcaaatgtgtccttcagggggcaa
aggatgggtttgggtgattcttgcctcatccctgggatatcttcaaacccttttctgagc
aagcaggagttgcagcatgtttctgaagctgcatttgaggagcaaaagaagcttgttcca
gcttttgctgacgctaaacttcatgtccctgcaccccaccagccagtctttgtagctgca
gagcatggcaatatccgtaacatggtagatatccagatgggagacaaaagtgaattaatg
cattcagacttcagtatagagagggaacataaagatgtcggaatttcaccttcctttaac
gagggatcattcattttacatctggcacatcccgttcatcattctactccaggaattttt
acaactagaagcttgactcgggaagttcctgctatgacatacccggtcaaagctgttctt
cagtcctctctcccttgcttacacgaggagttctcaaataactcttgttccaatacattc
cttccttccgtggaagagcctcgcgtaccttctctggatgatacttgcataccctctgcg
ggagagccgcttgccctgcaaagtggccaagcatcaaaagatgaaaacagtggtggtctc
caggttctatatcctcttaaaggcaggattcagtctctaccttctctcaacttcatggag
aaggttggggcatggaacatgagtcattcagctgagaggatgtctgatgccttggcttta
catggctcaagtggcgcttctcctaggcagaaggcctacagtgcaatagcagattccttg
aaccgcattttgttaaagcagcagagccaggctgatcttaaggcagggctggcagcatcc
ttttatgggccaaactccatgaccaacctgcatgtttatgataaaaacccaccacaggtg
ctgccacttaccaggtctcagtctgaaaactctgtggtcgcactcagcagagagatgcca
agggctgaagtaggtcatgaaacgtcccacagtgaagatcttcatccagtagaagataag
ggaagagtttcaggagcgtctggagtcaagcagagtgatgctaacattgaggatgcacat
tcccaacattatacagctgttctagtctccactgtctccagcgatgaagaaatcggcgaa
agtgccactggaggaaatccagataattttatttccagtgaaagagttgctgaactcctc
agagaagatgccagctttcttagtggtagccaagaaaagacagatggctgtcaagataat
accagagaattgccaggttttcttccttgtaccaaccagatcagtttgggccactttagt
gatgtttcaccagatagcttgaatcaaagaactagtcctgggacaggcagctgcgctgac
ttgagactttcttcaagacagtcttcaagacgctcttcaacgcgatcttcagttgtttct
gggaagttgcatggcagtttggaagaagtattcaaaactccatatgacagggagataaac
atcgaagaaagaatacctgtctacctccataacctgggcatcgatcagtccccttcgtcc
attctgactccatttatgccccgaggaccagtcagagaaatagaattctctcccactgag
ctgagaacactgaagacgtccaatgatttgttagcgcgacgcctgcagttatcggaagga
gactcggcctctgtgatagatgctctacagtcaagctttgactcttccattcatggttgg
cccgccccagctgggtcacatcctggtactgatcttccattgcctacagagttctcccat
cagccttccagagactgcttcgatcagggcagcattgtctgccatcagttggaactacat
actccgactccagagccaagagaaggcacttttgagtcttcagctcctcctaagacagca
gagcagagtcacgtaaccccagaatggccgtccaacatccattctggtgaggggagatct
ccaaaatgtgtacagagactgatggacagatttgattcaaaggaacttggtgtaagtcaa
gaccaactctcgcctagctctttggctcatggaaaaggtgaagaaagcgtaagtcaaaaa
atcagttcttcagctgtccttcttggaggagaagaagattgtttctttataggatctgaa
acattaaaagagatccagaaaattctggcagaggcagaaactaggagcccaagccgaaac
tttaaatccgcctcatccatctcctccacagacctggacagttcattaaagcaaataaaa
aagatggatggctctggagattctggattgttcaaggggagcagcccaggaattcagaga
atgtggtcatgggatgagacgctggctaggcaaagtgttcacagttacaatgtgctcccc
aaaacagctagcttcactggtagcttaaaatgtgatggtcagccagctgctgatgtcctc
agcaatgatcaaattttgccagaagagtctatgccaccctcccaagtaacggttgaagaa
cataggaccgtgaagcctgttaggcgatcagagcctgaaggctgtaatagtgccacagta
aataaaagcttgcccgtctttgtagacagcgctgcagacagcaagttgtttacccccaaa
gatctcaaagaattagcagctacgtctagcgcagggtccttagacagcgcctctaatatt
tgggaggaaggtcagcaagtcttgcagaaaaccaggaaagaaatgggtggcagtcatgga
agtggaaacagcagcagtgtggactcgctgggtatcaaagtgaagaatcttctgcggtgt
gaacgtcccgttttacacacaacacagtggggggagggggagaagcacaatgaacatagt
cagaaacaagtctcagctggagcccgtgtagcctgtagcaaaggggatcttgcgtcccaa
gagagtgagaacggcagtagcttggactcgctggctgctcgtgtcaaaacgcttctggaa
gacgaacgccctgtaatgcatgcagcccagatacttcagagtgctgaggaggaagaagaa
aaagcacatgcctgggtgaaactgaagctgactcttcaacctgcagacgccgaggctgat
ctaaacgaggaagaccggcggatgatagaagagatcaagagaatgcagcttttgagtgcc
aggatagctggaaatgttaaggatgggctgcggggaaacagctatgaaagaatttctagc
tgcagttctattctgaagacagacacagaactctcaaaaacttcaagtgacagtgagctg
caaaaggacattcggatacaagactcccaattagctgaatgccctgtaataagagcagcc
cagcctagagtggtatgtggaactgaccgtggccttccagatgactctgagattacgtct
ttgaccagtgaccaaagtcatgtcagcgaccagccgcggacacactcagaaaatctctca
gactccagccacaatgttcacactcctttgcgtattgccacagacacaagtctgcagggg
ctgacaggtaccaccaaggcagccacaggaaaagaagtgagtgtctcagcacaggcaaaa
ttggctgcggacacctcttctacagaatctgccaaacaaatcacatccattacttttgca
tcccgtaaaaggacatcgtcttcccgggtgccctgtgccagcattcctgaagccagtcct
ttggaaacccagtcgattagcaatgaacagctggagtctagtaagctgcatgtgggaact
cctcaaccctgcgcttctgcgagcatgacagccgttcatgcgccagataagagtgttgaa
tttcgtccgggtggagacggccatcgtcatgcgcccatggttgtcagcaaggaggcatat
cctcaggaaaagagttttgcctctatggagaattcccagccgatttgctctgatcaaaag
gtccactcagttgcagagaatcgggaagaaacccagactgcttcccaaggctttactggg
ataaaaagatacgacaggccttcagttaacacttctgataacaaatctaacccaggagaa
actgtggctgatcctctccgtcccttcaacccacctcaacaaaaggcaaaggatgtttct
caagatgtctcaagaagctttgctggtattcctaagccacactttcctacaggcaaggaa
agtacattgacgaaagagaacaaatctgcctctgatcaatatttatgcagggctgaagcc
atggacactggaagcagcagcccgttatccacttcctcccaagatcacatttcaacgacc
attccagtctctccttcatcaccaacccggaaagccctgtctggtgtccacatgaccctc
tctccaaagcatgtagaattgcctcttcctagtttaatagatgctggcgctgaaaagaga
cgagttggtggatttacaagcgaccctcatccagcaactctaaatgatccgagtcattcg
ttagaagcgacctctaattttaaacccacagaacgtttcacaagcacccaggattctgca
tactttccaagatcacctacaccagattcccactttaagcattcccatgttccagttgtg
gcaaaaccagctccaagtcaggagccactggagatcaggcagattttcccagttacagac
cgaggaagagtaccgggttcgtattggcagagtcccgaagagaacttaaaaaccacggcc
tcttcccaaacggaaaggatgtcgtcggatgccatcactcaaataacaacagaaagccct
gagagggcaacctattctgcagagatatttgttagcaatgacagcggtgatgtggaagct
ctgagaccttctcatcgaaagagtcatgaaatgctgggtactgcagctgctcccgtgagc
cacatctcagttttgaacaggcaggctggtacgccaaggttgctgccatataaaccacct
gggagctcagagatgtactacgttccctgtcctaaagaaaccctcagactctcgcgggtc
cgatcagagactaccatggagagctcccactcaggatcaaacgatgccacgcctccaaaa
tttccagcacaggcacttggctcaggggatgagattccaccaagtcctgtagctatcaag
cacagagagggcatctatagtaaaagggctgttcctaaggaggcttggacaggaggagat
gcacaggaaggtgtcaaaggaagtcccaaagtcccaaatcgcttggaatctgtggcagct
acccattcagtgttcagatctgctcagttttacctgcatcacccagtgcctctgcagcat
gaaattgacttccttgctgggaatgatgccttgggacagtatgcagtgcaagagcgccca
gcccttccttcaaaagacatcttccagtacgacggaacatccagaagaggtcaggcggtt
ttctctctgcaccagccaacaggagaggagaggttttccccaccgaattttgagccagat
tacagtgtgctggaggaattgaggttcaatgagactttggagagaggctctccaaggaag
gaactacaacagcctgatgtgaggaaaagtggccacaaattgtccaaaggccagcttctt
ccaagcagccaaaggagcagcttaaaagagaagcgggtagccgatctcccagagatgcaa
agtgctcctttcacaggcagtttagatgaactctgggctaaatacttggagcgtcagaag
cagcaccagcaacgtagtccgagtggcagcagcagaagtgagctgtctctggtagagcga
cttgatagattagccaggcttctgcagaacccggttaggcacaccctggtgcctgtcaag
gatgaagatgtctgtgtccaagtggaaccaaagggaaaagagtcaaagaagatcagttcc
caagcaaataaggcgtacaaaggtagagttgcaatccatagccccaggggaaaggcggaa
gagagcccagaggacaccagcaatacaaggctatcaaaatcgaggcattgtaaagttggc
agcgccgcagctctttaccacatggatcgaaatttggagcagcgtcggaattcggcgatt
ctgagcgacacctcttctgaaatgaggcctgtgaaagattgcagcgtgttaaccgacatc
acctccgattcagaagtgactcagcccgagacggacactgcgtctcggacggaggcaagt
gtttccgtttccacgatcgacacagagaggctgatccgggcctttgggcatgacagagtg
caggtgtcccccaaactgtcccagctctacagcgccatccgacaccagaagacgcgctcg
gagaagtacgccaaggggagcaggaaagacagggcagcagactaccaaagaacggctcat
gctgagccaaaaagaaaagagacccaggcaacggactctttcatttcttcggattccgtt
tctaccctcagcagttcccttggaccaagccctgctctcagtagcaagcggagcaggcgg
atgttgaacaaggctgtccaggcaggagactttgagattgtgaacagcgccaccaagaag
cacacccgagacgtcggcctgactttccccactccgacacccagccaagcgaggctgcgg
gaagatcccgagagtgggacggaggggggcgaatttgctcagctggatgggttccttctg
gaaagcaagggcaagcagaggaggcaacatggcaggcttcttgcagagaaaaagccgagg
aggaacaagccacggtggcggcaaggagtttcctggtttgtttcggcaaaggatatgaaa
cctgacttcagaaaaggatccagctacgtttatgatcctgatccctcctggtttgaagcc
gtgcccgacccgaagccctggcgagagcccctccgggagaaaaactggcaggaggagcac
agcgagctgcaggtgtgtctgatggctccatcgagagacgttgagaataagccgccccca
acttttgtgaaaatgacactgcaggagtctcttgcactgcaccgtcctgatttcatctcc
agctccggggagcgcgtgaagcgcctcaagctaataatggaagaaaggaaactgcagagc
atgctccagggcgagagagaagaattatttaatgctcgtgaagagagaagaagtttccat
cttcctaacagagactacagggctatgcagaagagaagagcaatttccaagaatgaaatg
gttcagagatcaaaacgcatctatgagcagctgcctgaggtgcgaaaaagacgggaagaa
gaaaagagaaaatccgactattctacaaatcgtttgaaggctcagctttataaaatgaaa
gtcaccaaccatattttgggaagaaaagtaccttgggagtga
DBGET
integrated database retrieval system
