Podarcis muralis (common wall lizard): 114604296
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Entry
114604296 CDS
T06059
Symbol
EDC3
Name
(RefSeq) enhancer of mRNA-decapping protein 3 isoform X1
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114604296 (EDC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114604296 (EDC3)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114604296 (EDC3)
mRNA degradation factors
5'-3' decay
Decapping complex
114604296 (EDC3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Edc3_linker
FDF
YjeF_N
LSM14
DUF5096
Motif
Other DBs
NCBI-GeneID:
114604296
NCBI-ProteinID:
XP_028600144
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Position
9:5852878..5879166
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AA seq
512 aa
AA seq
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MIRENMAADWLGSIVSINCGESLGVYQGRVSAVDQGSQTISLKRPFHNGVKCLVPEVTFR
AGDITELKILEIPSPGDNGQCGDFQHNDLCIPGIGCPGVTSQNGPGKLLKKPGASSSAPQ
NIPRRTDVKNQEVAISPQQQQCSKSYMDRHMESLNQSKGFRRRHNSWSSSSRHPNQVTPK
KSGVKNGQMKNKDDECFGDDIEEIPDTDFDFEGNLALFDKAAVFEEIDTYERKSGTRSRG
TPNERSARYRHDENILESEPIVYRRITVPQASKEFCTDSGLVVPSISYELHKKLLSVAEK
YGLTLERRLEMTGVCASQMALSLLGGPNRLNPKNIHQRPTVALLCGPHVKGAQGISCGRH
LSNHDVHVILFLPNFVKMLESITNELTLFSKTQGQQVSSVKDLPDSPVDLVINCLDCHEN
AFLRDQPWYKAAVDWANQNRAPVLSLDPPVNDMEQGIDAKWSLSLGLPLPLGERAGRVYL
CDIGIPQKVFQEVGINYHSPFGCKFVIPLHST
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatcagggaaaatatggctgcagattggcttggaagcattgtctcaatcaactgtgga
gagagcctgggagtctatcagggaagagtgtctgctgtggatcagggcagccagaccatc
tccttaaagcggcctttccacaatggtgttaaatgtttggtaccagaggtcaccttcagg
gcaggtgacattactgaactgaagatcctggagattccaagccctggtgataatgggcaa
tgtggagactttcagcacaatgacctttgtattcctggcattggatgtccaggggttacc
agccagaatggccccggcaaattgctgaagaaacctggtgcttctagtagtgccccacag
aatatccccaggcgaacagacgttaaaaaccaggaggttgccatttctccccagcagcag
caatgctccaagagctatatggaccggcacatggagtccttgaaccaatccaaaggcttt
cgacggaggcataactcgtggtcctccagtagccgccatccaaaccaggtgactccaaag
aagagtggtgtgaagaatgggcagatgaagaacaaagacgacgagtgttttggggacgac
attgaagaaatcccagatacagattttgattttgaagggaacctggccctctttgacaag
gcagctgtgtttgaggagattgacacttacgagaggaagagtgggactcgctcaagaggc
actccaaacgagagatctgcacgctatcgccatgatgagaatatcttggaatctgagcct
atcgtgtatcgcagaatcactgtgccccaggcaagcaaagaattctgcactgactctggg
ctggtcgttccaagtatctcctatgagcttcacaaaaaacttctttcggtggcagagaaa
tacgggctcacccttgaacggagactggaaatgacgggggtatgtgccagccagatggcc
ctgagtctgctcggagggcccaacaggttgaacccaaaaaacattcaccagcgacccacg
gttgccttgctgtgtggccctcacgtgaagggggcccagggaatcagttgtggccggcat
ctttccaatcatgatgtgcatgtcattctcttccttcccaactttgtcaagatgctggaa
tcaatcaccaacgagctgacactttttagcaagacccaaggccaacaggtgtccagtgtc
aaagatcttccagactcaccagttgacttggtgataaactgcttggattgccatgaaaat
gccttcctgagggaccagccttggtacaaggctgctgtggactgggccaaccaaaataga
gcccccgtcctcagcctggaccccccggtgaatgacatggagcaagggatcgacgccaaa
tggtctctgtccctggggctgccactgcccctaggtgagagggctgggcgcgtgtacctg
tgtgacatcggcattccacagaaagtcttccaggaggtggggataaactaccactcgcct
ttcggctgcaagttcgtcatccctttgcactctacctaa
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