Podarcis muralis (common wall lizard): 114605043
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Entry
114605043 CDS
T06059
Symbol
CPSF6
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03015
mRNA surveillance pathway
pmua03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114605043 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114605043 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114605043 (CPSF6)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
114605043 (CPSF6)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
114605043
NCBI-ProteinID:
XP_028601619
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Position
10:30054167..30080882
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AA seq
548 aa
AA seq
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MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDSLPPSV
GDDVGKGSAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFELQSRKTTQSGQM
SGEGKAGPPGGSSRATFPPSNRGRGRFPGALPGGDRFPGPAGPGGPPPPFPAGQTPPRPP
LGPPGPPGPPPPGQVLPPPLTGPPNRGDXPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGY
GPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFP
PPANSGIPTSDSRGPPPSDPYGRPPPYDRGDYGPPGREIDAARTPLSEAEFEEIMNRNRA
ISSSAISRAVSDASAAEYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESK
SYGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERD
REREYRHR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgtggaccacatagatatctacgccgatgtgggagaggaattcaaccag
gaggctgagtatggtgggcatgatcaaatagatctgtatgacgacgtaatctctccatct
gccaataacggcgatgctccagaggatcgtgattatatggactctctcccaccatctgtt
ggagatgatgtaggcaaaggatcagcaccaaatgttgtctacacgtatacaggaaagaga
attgcattgtacattgggaatcttacttggtggaccacagatgaagatttaactgaagca
gttcattcacttggtgtaaatgatattttggagataaaattttttgaaaaccgagctaat
ggccaatctaaggggtttgctcttgtaggtgtgggatctgaggcatcttccaaaaaacta
atggatctgttgcctaaacgagaattgcatggtcaaaatcctgttgttactccttgtaat
aagcagtttctgagtcaatttgagctgcagtccagaaaaactacacagtcaggccagatg
tctggtgaaggcaaagctggtcctcctggaggcagttcacgggcaacgtttccaccaagt
aacagagggaggggtcgttttccaggcgcccttccaggaggagatagatttcctggacca
gctggaccaggaggacccccaccaccttttccagctggacagacacctccacgtccaccc
ctaggtcctccaggccctccaggtcctcctccacctggccaggttctacctcctccacta
acgggtccccctaatcgtggtgacncgccccctcctccagttctgtttccagggcaaccc
tttggtcaacctccactgggccctcttccccctggccctccacctccagttccaggctat
ggtcctccaccaggtcctccacccccacaacagggccctcctccacctccaggtcctttc
ccccctcgtccacctggtccgctagggccacccctgacattggctcctcctcctcactta
cctgggcctccaccaggtgctcccccaccagctccacacgtgaatccagctttcttcccc
ccgccagccaacagtggcatacctacatcagacagccgtggtccaccaccttcagaccca
tatggccggcctccaccttatgacagaggtgattatggtccaccaggcagggaaatagat
gctgcaaggacgcctttaagtgaagcagaatttgaagaaatcatgaatagaaacagagct
atctctagtagtgccatttcaagagctgtatcagatgcaagtgctgcggagtatggaagt
gctatagaaaccttggtgactgcaatttcattaattaaacagtccaaagtatctgctgat
gatcgttgcaaagtacttattagctctctgcaagattgcctccatggaattgagtccaag
tcttatggttctgggtcaagacgtgagcgatcaagagagagagaccatagcagatcaaga
gagaagagccggcgccacaaatctcgtagcagagatcgtcatgatgattattaccgggaa
agaagccgtgaacgtgagagacatcgtgatcgcgatagagaccgcgacagagagcgcgat
agagagcgagagtatcgtcatcgttaa
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