Podarcis muralis (common wall lizard): 114608023
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Entry
114608023 CDS
T06059
Name
(RefSeq) cleavage stimulation factor subunit 2-like isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114608023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114608023
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
114608023
U7-dependent histone pre-mRNA processing factors
114608023
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
114608023
NCBI-ProteinID:
XP_028607622
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Position
13:complement(34716185..34728455)
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AA seq
665 aa
AA seq
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MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARSMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTTVPALIPSGLQAGPGQGPGPGQGPGPGPGPGPGPGPGPNAQMNQP
NVPSSQPQPIQGGMHVNGAPPMMQPPMQGGVPAPGQMPSSGPGPLAPGGGMPGGGPMLLE
RGQGNLQLSPVGPARPSSIERVQVPMPDPRAPMQRGPMPASGPPPRGLLGDAPNDPRGGT
LLSVTGEVEPRGYLGPSHQGPPHQGPPMHHMAGHDNRGPPPHEMRGGPMGEPRPLMGEPR
GPMMDTRGGRDPRGMEPRGMDGRGMEPRGMEPRGMEPRVMDARGMEPRGMEPRVMEMRGM
EPRGMEPPRGMEPRGMEPRGMEPPRGMEPPRGMEPPRGMEPPRGMEPPRGMEPPRGMEPP
RGMEPRGMDSRGPGPNPRGPMTGGIQGPGPLSMASTVSQGPRQVPNMPAAAMQAGGMPGP
SVQAAGQPGGFSPGQNQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQK
STSAP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgtccgtgcgggatcccgccgtggaccggtccctgcgctccgtttttgtg
gggaacatcccatatgaagccacagaagagcagttaaaggacattttctcagaggttggg
cctgtcgtcagtttccgattggtgtatgaccgagagacgggcaaaccaaaaggttatggc
ttttgtgaatatcaagaccaggagacggcactcagtgccatgcggaatctgaatggacgt
gagttcagtgggagagccctgcgtgtggacaacgcagccagcgagaagaacaaagaggag
ctgaagagcctgggcactggggcccccatcattgagtcgccctacggagaccctgtgaac
cctgaagatgctcccgagtccatcagcagggctgttgccagcctcccaccagagcagatg
tttgaactgatgaagcagatgaagctctgtgtccagaacagtcctcaggaggctcggagc
atgctgctgcagaaccctcagctcgcctatgccctgctgcaggcccaggtggtgatgcgg
attgtggatccggagatcgctctgaaaatcttgcatcggcagacgaccgtcccagctctg
attccaagcggcctgcaagcgggtccaggacaagggcctgggcctgggcaaggtcccggg
cctggacctggacccggaccagggcctggtcctggtccaaatgcacagatgaaccagcca
aacgtcccctcctcccagccacaaccaatacaggggggtatgcatgtcaatggagccccc
cctatgatgcagccacccatgcagggaggagtgccagccccagggcaaatgccaagctct
ggccctggccccttggctcctggaggtggcatgccagggggtggcccgatgctcttggaa
cgtggtcaagggaacctgcagctctctcccgtgggacctgccaggccttcctctattgag
cgagtacaagtgcccatgccggatccacgggcccccatgcagcgtggcccaatgccagct
agtggtccaccaccgcgaggccttctgggagatgccccaaatgatccacgtgggggaact
ctgctgtcagtcactggagaagtggaacccaggggttaccttgggccatcgcaccagggg
cctcctcaccagggcccccccatgcaccacatggctggtcatgacaatcgtgggccgccc
ccccacgaaatgagaggtgggccaatgggagaaccgaggcctttgatgggagagccacga
ggtcccatgatggacacccgaggtggaagagatccaaggggaatggagccccgaggcatg
gatggcaggggcatggagcccagaggaatggagcccagagggatggagcccagagtgatg
gatgccaggggcatggaaccccgagggatggagcccagagtgatggaaatgcggggcatg
gagcccagaggcatggaacctcctcggggcatggagcctcgtgggatggagcccagaggc
atggaacctcctcggggcatggagccacccaggggcatggagccacccagggggatggag
ccccccagaggcatggaaccacccaggggaatggagccacccagggggatggagccaccc
agggggatggaacccagaggcatggactcaaggggccctggccccaatccaaggggtcca
atgactggaggcattcaaggccctggacctcttagcatggcatccactgtctcgcagggg
cctcgacaggtgcctaacatgcctgccgcagcaatgcaggccggaggcatgccaggacca
agcgtacaagcagctggccagcctggagggttcagtcctggccaaaaccaggtaacaccc
caggatcatgaaaaggccgcactcatcatgcaggtcctccagctgacggcagaccagata
gctatgttgcctccagagcaaaggcagagcatcctgatcctgaaagagcagatacagaag
tccaccagtgccccttga
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