Pseudomonas mucidolens: NCTC8068_04088
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Entry
NCTC8068_04088 CDS
T08935
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NCTC8068_04088 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmud01007
]
NCTC8068_04088 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmud03016
]
NCTC8068_04088 (aspS)
03029 Mitochondrial biogenesis [BR:
pmud03029
]
NCTC8068_04088 (aspS)
Enzymes [BR:
pmud01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
NCTC8068_04088 (aspS)
Amino acid related enzymes [BR:
pmud01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NCTC8068_04088 (aspS)
Transfer RNA biogenesis [BR:
pmud03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NCTC8068_04088 (aspS)
Prokaryotic type
Other AARSs
NCTC8068_04088 (aspS)
Mitochondrial biogenesis [BR:
pmud03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NCTC8068_04088 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
SQH35371
LinkDB
All DBs
Position
1:complement(4472088..4473863)
Genome browser
AA seq
591 aa
AA seq
DB search
MMRSHYCGQLNETLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAA
ADRVRSEYVVKVTGKVRLRPAGAVNANMASGAIEVLGYDLEVLNESETPPFPLNEFSDVG
EETRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRFLDENGFLDVETPILTRATPEGARDYL
VPSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETS
FLDETEIMGLTEQMIRNLFKEVLGLEFGEFPHMTFEEAMRRYGSDKPDLRNPLELVDVAD
QLKEVDFKVFSGPANDPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNER
ANGVEGLQSPIVKNIPLDNLNAILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHDL
SLLTCEWAPMWVVDFPMFEENDDGSFSALHHPFTAPKCSPQELEANPAGALSRAYDMVLN
GTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAFGLDRLV
MLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREAPKAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcagccactattgcggccaactgaacgagaccctggaaggtcaggaaatcacc
ctttgcggatgggttcaccgtcgccgcgaccacggcggggtgatcttcctcgatatccgt
gatcgcgatggtctggcccaggtggtattcgacccggatcgcgccgagagcttcgccgcc
gccgatcgcgtgcgcagcgaatacgtcgtgaaagtcaccggtaaggtccgcctgcgtccg
gccggtgccgtcaacgccaatatggcctcgggcgcgatcgaagtgctgggttacgacctc
gaagtactcaacgagtcggaaaccccaccgttcccattgaacgaattttccgacgtcggc
gaagaaacgcgcctgcgttaccgcttcctcgacctgcgtcgtccggaaatggccgagaag
ctgcgtctgcgctcacgcatgaccaccagcatccgccgcttcctcgacgagaacggtttc
ctcgacgtcgagacaccgattctgacccgcgccacaccagaaggtgctcgcgactacctg
gtgccgagccgtacccacgccggtagtttcttcgccttgccgcaatcgccgcagctgttc
aagcagctgttgatggtggccggtttcgaccgttactaccagatcgccaagtgcttccgt
gatgaagacctgcgtgccgatcgtcagccggaattcacccagatcgacatcgagaccagc
ttcctcgatgaaaccgagatcatgggcctcaccgagcaaatgatccgcaacctgttcaag
gaagtgctgggtctggaattcggtgagttcccgcacatgacgttcgaagaggcgatgcgc
cgctacggttccgacaaaccagacctgcgtaacccgctggaactggtggacgtggccgat
cagctgaaagaagtcgacttcaaggtgttcagcggcccggccaacgacccgaaatgccgt
atcgctgccctgcgcgtaccgggtggcgcaagcatgccgcgcaagcagatcgacgactac
accaagttcgtcggcatctacggcgccaagggcctggcgtacatcaaggtcaacgagcgc
gccaatggtgttgaaggtctgcaatcgccgatcgtcaagaacattccgctggacaacctg
aacgcgatcctcgatcgcgttggcgcggtcgatggcgacatcgtgttcttcggcgccgac
aaggccaagatcgtcagcgaagcccttggcgcgctgcggatcaagctgggtcacgacttg
agcctgctgacctgcgaatgggcaccgatgtgggtcgtcgatttcccgatgttcgaagag
aacgacgacggcagcttctctgcgttgcaccacccgttcaccgcgccgaagtgctcgccg
caggaactggaagccaacccggcaggcgcgctgtcccgcgcctacgacatggtgctgaac
ggcaccgagttgggtggtggttcgatccgtattcaccgcaaggaaatgcagcaagcggta
ttccgtctgctgggcatcaacgaggcggaacaggaagagaaattcggcttcctgctcgat
gcgctgaaatacggcgcgccaccccacggtggtctggccttcggccttgaccgtctggtg
atgctgatgacaggcgcccagtcgatccgtgaagtgattgccttcccgaaaacccagagt
gctgccgacgtgatgacgcaggctccgggcgtggtggatgccaaggccctgcgcgaattg
catatccgtctgcgcgaggcgccgaaggctgagtaa
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