Pseudomonas mucidolens: NCTC8068_04353
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Entry
NCTC8068_04353 CDS
T08935
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00470
D-Amino acid metabolism
pmud00550
Peptidoglycan biosynthesis
pmud01100
Metabolic pathways
pmud01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC8068_04353 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC8068_04353 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NCTC8068_04353 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmud01011
]
NCTC8068_04353 (ddlB)
Enzymes [BR:
pmud01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NCTC8068_04353 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmud01011
]
Precursor biosynthesis
Amino acid ligase
NCTC8068_04353 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
ATP-grasp_5
GARS_A
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
SQH35844
LinkDB
All DBs
Position
1:complement(4749278..4750234)
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AA seq
318 aa
AA seq
DB search
MSTDYGSLFSTVQPADFGRVAVLFGGKSAEREVSLKSGNAVLEALQSAGVNAFGIDVGDD
FLARLQAEKIDRAFIILHGRGGEDGSMQGLLECAGIPYTGSGILASALAMDKLRTKQVWH
SLGIPTPRHSVLRSEDDCICAAEELGLPLIVKPAHEGSSIGMAKVNSAAELIDAWKAAST
YDSQVLVEQWICGPEFTIATLRDQVLPPIALGTPHTFYDYDAKYLASDTQYRIPCGLDAT
KEQELMDLTAKACEALGIAGWARADVMQDDQGNFWFLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILAASIEARG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgactacggctccctgttttccaccgtccagcccgccgacttcggccgggtc
gcggtgttgttcggcggcaagagcgccgagcgcgaagtgtctttgaaatccggcaatgcc
gtgcttgaagcgttgcaaagcgccggtgtaaatgccttcggcatcgacgtgggcgatgat
ttcctggcgcgcctgcaggccgagaaaatcgatcgtgccttcattattctgcatggccgt
ggcggtgaagacggcagcatgcaggggttgctggagtgcgcaggtattccttacaccggc
agcggcatcctcgcgtcggccctggcgatggacaagttgcgcaccaaacaggtgtggcac
agcctgggcattccgaccccgcgtcacagcgttctgcgcagtgaagacgattgtatttgc
gcagccgaggaactgggcctgcctttgatcgtcaaacctgcccatgaaggctccagtatc
ggcatggctaaagtgaactcggccgccgaattgatcgacgcatggaaagcggcaagtacc
tacgattcgcaagtgttggtggaacagtggatctgcggtcccgagttcaccatcgcgact
cttcgtgaccaggtattaccgcctatcgcgctgggcacgccccataccttttacgactac
gacgccaagtacctggcttccgatactcagtaccggatcccgtgcggccttgacgcaacc
aaagagcaggaattgatggaccttacggcgaaagcctgtgaggcgctgggtatcgccggt
tgggcgcgggcagacgtgatgcaggatgaccaagggaatttctggtttctggaagtcaac
accgcaccgggcatgaccgaccacagcctggtacccatggctgcacgcgcggccggactg
gatttccagcagttggtgctggccattctggctgcaagcattgaggcgcggggttaa
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