KEGG   Prunus mume (Japanese apricot): 103320078
Entry
103320078         CDS       T03196                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03008  Ribosome biogenesis in eukaryotes
pmum03013  Nucleocytoplasmic transport
pmum03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103320078
   03008 Ribosome biogenesis in eukaryotes
    103320078
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103320078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103320078
   03009 Ribosome biogenesis [BR:pmum03009]
    103320078
   03016 Transfer RNA biogenesis [BR:pmum03016]
    103320078
   03036 Chromosome and associated proteins [BR:pmum03036]
    103320078
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmum04147]
    103320078
   04031 GTP-binding proteins [BR:pmum04031]
    103320078
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     103320078
Ribosome biogenesis [BR:pmum03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    103320078
  Pre-60S particles
    103320078
Transfer RNA biogenesis [BR:pmum03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    103320078
Chromosome and associated proteins [BR:pmum03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     103320078
   Spindle formation proteins
    103320078
Exosome [BR:pmum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103320078
GTP-binding proteins [BR:pmum04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    103320078
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 AAA_16 ArgoMid Septin AAA_22 AAA_7
Other DBs
NCBI-GeneID: 103320078
NCBI-ProteinID: XP_008219916
LinkDB
Position
LG2:8745082..8747252
AA seq 214 aa
TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCW
DTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKV
DVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGETELRFVESPALAP
PEVQIDMAVQAKHEQELAQAAAQPLPDDDDDLFE
NT seq 645 nt   +upstreamnt  +downstreamnt
actgtcgattaccctagcttcaaacttgttatcgttggcgacggtggaactggcaagacc
acgtttgtgaaacgccatctcactggagagtttgagaagaaatacgaaccaactattggt
gttgaagttcatccgttggacttcttcacaaactgtgggaagatcaggttttactgttgg
gacaccgctggtcaggagaagtttggtggactcagagatggttattatattcatgggcag
tgtgcaatcatcatgtttgatgttactgctcgtttgacatacaaaaatgtccccacatgg
caccgtgatctctgcagggtgtgtgagaacattcccattgttctgtgcggaaacaaggtg
gatgtgaaaaataggcaggtaaaagcaaagcaggttacctttcacaggaagaaaaatctc
cagtactacgagatttctgcaaagagcaactacaactttgagaaacctttcttgtatctt
gccagaaagcttgcaggagagactgagctgcgttttgttgaatcacctgctcttgctcct
ccagaagttcagattgacatggctgtccaagcaaagcatgaacaagaattggcacaggca
gctgcacaaccacttccagatgacgatgatgatctgtttgagtag

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