Prunus mume (Japanese apricot): 103325465
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Entry
103325465 CDS
T03196
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103325465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103325465
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103325465
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GFIT
Motif
Pfam:
cNMP_binding
DUF2200
DUF6290
DUF6154
Motif
Other DBs
NCBI-GeneID:
103325465
NCBI-ProteinID:
XP_008225852
LinkDB
All DBs
Position
LG3:6337145..6346069
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AA seq
800 aa
AA seq
DB search
MDVEGGEVTIPSSSRLYFDFGDDCYNHEMKEKGILWRIFFSPLTRKKAFIISCIAVSIDP
LFFYIPVIDEKNKCLGIDKRLKTAALCLRALPDAAFALHTINYVFILVKGLLIRVPWAWL
PELGAFVFLVVGILGILGILVFSFIHILLGGFLILPIPQLAILVFFFKSGGSGHFGRRVT
TLNVFLVMHYPARVFLIYRFSKYLKNKTKTGVQAALYFFFYVLSSHVLGGFWYFFSIQRE
ISCWHQFCKNAISCGAIDYCSGSTSRNITFLNELCPSNPPNATVFNFGIFLDAIQYGITR
SMHFPTKFFYRVWWGVRNLSNFGTNMQTSSYVWENCFAIIVSLIGLLLFLYLLGNLQIYM
QQALQKSLDKKKLGRKIDKKKKKIQKCMKMHGISDDTVGKILCGTRENKLEKNIDGEVDV
NYIFYVLYESERRLMCQDICWKKLKKVGSFPLSFLGVKELQHMNDEALEMICNYLKPKIF
KENEMVVEAGHPLNAMLIIIAGFMQAYLPIRDVGDAHPSTSFETLDKGMFVGEQLLDWAA
KTKTLGDQPVSFKTIRCSKKVEAFALTVDDLKTLVHIKGIFLMSKVGFLNIHADDWRIRE
KRDAILLWMGRNDISVDVVVDIMQGFSKNKLEEKIDDEVDVNYIFSVFEEYERSIMRRYF
CMEALKKVRELQHMNDRALGMICDCLKPKVFEENAKVVEVGEPLNALLYIIAGSMKVYLP
IIDAGEAAPSNSFDTLEKGMFVGEQLLYWAMKTKAFDDQPASFKTIQCTKKVEAFALTVD
DLKTLALSGDIFPMKFKGDL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggaagggggagaggtaaccatcccttcaagttccaggctgtatttcgatttt
ggcgatgattgctacaatcatgaaatgaaagagaagggaattctttggcgcatcttcttc
tctccattaacgaggaagaaggcatttataatatcatgtattgcagtgtcaatagatcct
ttgttcttttacattccagtcatcgatgagaagaacaagtgccttggaatagacaaaagg
ttgaagactgcagctctttgcttgcgagcacttcctgatgccgctttcgcactgcatact
ataaattatgtgtttatactagtgaaagggctgcttataagggtgccctgggcttggctg
ccagagcttggtgcttttgtattcctcgttgttggaatacttggaatacttggaatactt
gtcttcagctttattcatatattactaggcggtttccttatccttcccatcccacagttg
gcaatactagttttctttttcaagtcaggaggctctggacatttcggccgaagagtgacc
accctgaacgtgttccttgttatgcattatccggccagggttttcttaatctacagattc
agtaaatatctcaagaacaaaaccaaaacaggggttcaagctgcattatattttttcttc
tacgttctttctagtcatgtacttggaggtttttggtatttcttttctattcaacgagag
atatcatgctggcatcaattctgtaaaaatgctataagttgtggagccattgattattgc
agtggcagtacttcacgaaatatcaccttcctaaatgagttatgcccgtcaaatccacca
aatgctaccgtatttaattttggaatatttcttgatgccattcaatatggaatcacaaga
tcaatgcattttccaaccaagttcttttaccgcgtatggtggggagtcagaaatctaagt
aactttggtacgaatatgcaaacaagcagctatgtgtgggaaaactgctttgcaattatc
gtttctttgattggcctgctattatttttatatctccttggaaacctacagatatatatg
caacaagcactccaaaaatcgttggataagaagaagttaggacggaagatagataagaaa
aaaaagaagatacaaaagtgcatgaaaatgcatggcatttcagatgatacggttggaaaa
attttgtgtggtactagagaaaacaaattggaaaaaaacattgatggtgaagtggatgtg
aattatatcttctatgttttgtacgagtctgagagaagacttatgtgccaagatatttgt
tggaagaagctgaaaaaagtaggttcctttcctctctcttttcttggtgtaaaggaactt
caacatatgaatgatgaagcgttggaaatgatctgcaactatctcaagccaaagatcttc
aaggagaatgagatggtggttgaagcgggacacccacttaatgcgatgctcattattata
gcaggctttatgcaggcgtacctgccaattagggatgttggagatgcacatccctcaacc
tcatttgaaactcttgacaaaggtatgtttgttggagaacaacttctggattgggcagcg
aaaaccaaaactttaggtgaccaacctgtttcgttcaaaactatccgatgttccaaaaaa
gtagaagcctttgctctcaccgttgatgacttgaaaactttagtgcacatcaaaggcatc
ttcctgatgtcaaaagttggctttctcaatattcatgctgatgactggaggatacgtgag
aaacgagatgcgatattgttgtggatgggaagaaatgacatttctgttgatgttgtggta
gatattatgcagggttttagtaaaaacaaattggaagaaaaaatagatgatgaagtggat
gtgaattatatcttttctgtttttgaagaatatgagagaagcattatgcggcgttatttc
tgcatggaggctctgaaaaaagtaagggagcttcaacatatgaacgatcgtgcattggga
atgatctgtgactgtctcaagccaaaggtgttcgaggagaatgccaaggttgttgaagtg
ggagagccacttaacgcgctgctctatattatagcaggctctatgaaagtgtacctgcca
attatagatgctggagaagcagctccatcaaactcattcgatactcttgagaaaggtatg
tttgttggagaacaacttctgtattgggcaatgaaaaccaaagcttttgatgaccaacct
gcttcgttcaaaactatccaatgtaccaaaaaagtagaagcctttgctctcacagttgat
gacttgaaaactttagcgctctctggagacatcttcccgatgaagtttaaaggtgatctt
tag
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