Prunus mume (Japanese apricot): 103326258
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Entry
103326258 CDS
T03196
Name
(RefSeq) lysine-specific histone demethylase 1 homolog 2
Organism
pmum
Prunus mume (Japanese apricot)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
Thi4
FAD_oxidored
FAD_binding_2
AlaDh_PNT_C
Pyr_redox
HI0933_like
GIDA
FAD_binding_3
NAD_binding_9
MurD-like_N
Lycopene_cycl
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
103326258
NCBI-ProteinID:
XP_008226688
LinkDB
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Position
LG3:12333690..12336849
Genome browser
AA seq
748 aa
AA seq
DB search
METPGAAGSVTKRSLRKKAGLRNYDENLMDDFIEKHLGGTLKKRNRTKEDLEKETEIEAM
IALSLGFPIDELLEEEKKAGVVSELGGKQQNDYIVVRNHILARWRGNVQVWLSKGQIKET
VSGDYEHLISSAYDFLLYNGYINFGVAPSFVASMPEEATEGSVIIVGAGLAGLAAARQLL
SLGFKVAVLEGRNRPGGRVYTQKMGRDDKFSAVDLGGSVITGIHANPLGVLARQLSIPLH
KVRDKCPLYKPDGTPVDKDIDSKIEVIFNKLLDKVMELRQTMGGFGNDVSLGSVLETLRQ
LYGVGRSTEERQLLDWHLANLEYANAGCLSNLSATYWDQDDPYEMGGDHCFLAGGNWRLI
KALCEGVPIFYGKTVNTITYGDEGVEVIAGDQVFRGDMVLCTVPLGVLKKGAIRFEPQLP
PKKIAAIERLGFGLLNKVAMVFPHVFWGEDLDTFGCLNEHGHKRGEFFLFYGYHTVSGGP
VLIALVAGEAAQTFESTEPTILLHRVLSVLRGIYTPKGIDVPRPIQTICTRWGGDPLSYG
SYSHVRVQSSGNDYDLLAENVGNRLFFAGEATNRQHPATMHGAFLSGLREASCIYRATRR
NQNNLRKVMQKNVGPSNDMLEDLFKRPDLAFGNFSFVFDPSTEDPKSVGLMRVSVGSSED
SYKQELPNNFQHSLTIPLQLYTVISREQACGLELVAGGDENRLSYLVKDFGLKLMGPSAL
GTVGNSLTVSIANARRGRGRNRTSAGRQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggagacaccaggtgcagctggttctgttactaagcggtctctaaggaagaaagcgggt
ttgcgaaattatgatgagaatttgatggatgatttcatagagaagcatttgggtggtact
ttgaagaaaaggaatagaaccaaggaggatttggagaaagagaccgaaattgaggccatg
atagcattgtccctgggattccccattgatgagctgcttgaggaggaaaagaaagctggg
gtggtcagtgagttgggcgggaagcagcagaatgattatattgttgtgaggaatcatatt
ttagcaaggtggaggggtaatgtgcaagtgtggctttcaaaaggacagattaaagaaact
gtgagtggtgattatgagcatttgatatcttcagcttacgactttcttttgtataatgga
tacattaattttggggttgcaccatcatttgtggctagtatgccagaggaggcaaccgaa
gggtctgtcattattgttggtgcgggacttgctgggctagcggctgcaaggcagcttctg
tcattgggtttcaaggtggctgttttagaaggtaggaatcgacctggtggaagagtttac
acccaaaagatggggcgggatgacaaattttctgcagtggatcttggcggcagtgtcatt
actggcatccatgctaatcctcttggagttctggccaggcaactttccattccgcttcat
aaggtcagagataagtgtcctctgtacaagcctgatgggacacctgttgataaggacatt
gattctaagattgaagtcatctttaataagttgcttgacaaagtcatggaactcagacaa
actatgggtgggtttggaaatgatgtatctttgggttcagttttggagacactgaggcag
ttgtatggtgttggtagaagtactgaggagaggcaacttcttgattggcatctggcaaat
ttggaatatgcaaatgctggatgtctatcaaatctctcagctacttattgggatcaggat
gatccttatgagatgggtggggaccactgctttcttgctggaggtaattggagattgata
aaagcattgtgtgaaggggttcccatattctatggaaagactgtcaataccattacttat
ggagatgaaggggttgaagttattgctggggaccaagtgtttcgaggggatatggtccta
tgcactgttcctcttggagttctgaaaaagggggctatcagatttgaacctcagttgccc
ccaaaaaagattgcagcaattgaaaggttgggatttgggctgctgaacaaagtagctatg
gtttttcctcatgttttctggggagaagacctggatacttttggatgtctaaatgagcat
ggccataaacgtggagagttctttctgttctatggataccatactgtatctggaggtccg
gttctcattgcactggtggctggagaagctgcacaaacatttgaaagcacagagccgacc
atattgctccatcgagttttaagcgtcctcagaggtatatatactcctaaggggattgat
gtgcctcggccgatacaaaccatatgtacaagatggggtggtgatcccctttcctatggt
tcatattctcatgttagagtacagtcctctggcaatgactacgatttactagcagaaaat
gttggaaaccggctgttctttgcaggtgaggctacaaataggcaacatcctgctactatg
catggggcctttctgagtggcctgagagaggcttcgtgcatatatcgcgccacaagacgt
aaccaaaataatctgaggaaagtcatgcaaaagaatgttggaccaagcaatgatatgctg
gaagatttattcaagaggcccgatttagcatttgggaatttttcgtttgtatttgatcct
tcaacagaagatccaaaatcagtagggcttatgagagttagtgttgggagtagtgaagac
agttataaacaagagttaccaaacaacttccaacattccttaaccatacccttgcagctt
tatacagtcatatctcgtgagcaagcatgtgggttagaactggtggcgggaggagatgaa
aataggttatcatatttggtaaaagattttggcttgaagctgatgggacctagtgccctg
ggaactgtaggtaactccttgacagttagcattgctaatgctagaagaggcaggggaagg
aatcgcacgtctgctggacgccagtag
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