KEGG   Prunus mume (Japanese apricot): 103328615
Entry
103328615         CDS       T03196                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103328615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103328615
Spliceosome [BR:pmum03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103328615
 Complex B
    103328615
 Complex C
   U2 SnRNP specific factors
    103328615
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin DUF5349
Other DBs
NCBI-GeneID: 103328615
NCBI-ProteinID: XP_008229239
LinkDB
Position
LG4:11753277..11755743
AA seq 685 aa
MVLSSHQMGSFLPLAVPLDDGNLGPIPASQVKDEKQLGEEVSKTTTNLSSSSSSSVSTHT
RAIGIIHPPLEIRIVLDKTAEFVAKNGPGFEKRVVAENTGNQKFNFLISSSPFHAYYQHR
LLEFCAQNQSSGQQEQEQEQPSLQQPAADPSAQFKPVLKVLETPEAEEYTVRLPQGITGE
DLDIIMLTSQSVARNGRSFLTGLVNREINNPQFHFLMIPTHRMFTFFSSLVDAYSKVVMP
PKGLTEKLKKSVADMETVLERCVHRLEWERSQEQAKQRAEDEIEQERIQMAMIDWYDFSV
VETINFADDEDEDLPPPMALDEVIRRSKVTDMEEDIVQPGEQVEMEMDEEEMQLVEEGFM
TEDPEPPLRIVNNWKRPEDRILDQRDPTKYVISPITGELIPINEMSEHMRISLIDPKYQE
QKERMFAKLRETTLAHDDEISRNILGLARTRPDIFGTTEDEVSNAVKTEIERKKDEQPQQ
VIRDGHTGSTSRTENHVLNNDARNLPGPAAPPLSRPPVVQYQSVRPPPPGSWFTVMQVPR
AYNPLAVPPPTIQMMPPPPLPQGMPPPPLPEEPAPKRQKLDDSTLIPEDQFLAQHSGPVH
ITVSVPNVGEGNLKGQLLEIMVQSLSENVGSLKEKISGEIQLPANKQKLSGKPGFLKENM
SLAYYNVGAGETLTLSLRERGGRKR
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggtgctcagctcacatcagatgggttcctttttgcccttagcggttcctcttgatgac
ggaaaccttggtcctattccagcatcccaagtgaaggatgagaagcaattgggtgaggag
gtgagcaaaaccacaaccaacttgtcttcttcttcttcttcttcagtttcgacgcatact
agggctattgggatcattcatcctcccctagaaatcagaatcgttcttgacaaaactgcc
gaattcgtggcaaagaatggacccggatttgagaaaagggtcgttgctgagaatactgga
aatcaaaagttcaactttttgatttcctcaagcccttttcacgcatattatcagcatcgc
ttgcttgagttctgtgctcaaaatcagtcttctggacagcaagagcaagagcaagagcaa
ccttctttgcagcagcctgcagcagatccctctgcccagtttaaaccagtgctcaaagtg
ctcgaaacacccgaagctgaggagtatactgttcggcttcctcaaggaattactggggaa
gatttggatattattatgctcacttcccagtccgtggctcgaaatgggagatcgtttttg
acaggattggtaaacagggaaatcaataacccccagttccattttctgatgattcctacc
cacagaatgtttacgtttttctcttctcttgtagatgcgtattcgaaggtggtgatgccg
cccaagggtttgacagagaagcttaagaaaagtgttgcagacatggaaactgtgcttgaa
aggtgtgtgcatcggctggagtgggaacgttcacaagagcaggcaaagcagagggctgaa
gatgagattgagcaggaaaggatacaaatggctatgattgattggtatgatttttctgtg
gttgaaacaataaactttgctgatgatgaagacgaggatttacctcctccaatggccctt
gacgaggttataaggagaagcaaggtcactgatatggaagaagatattgttcagcctggt
gagcaggtggaaatggaaatggatgaagaagagatgcagcttgttgaggagggcttcatg
acagaggatccagaaccaccactgagaattgtgaacaattggaagagacccgaggacagg
atccttgaccaaagagacccaacaaagtatgtcatttctccaatcactggggagcttatc
cccatcaatgagatgtctgaacacatgaggatttctctaattgatccaaaatatcaagag
cagaaagaaaggatgtttgctaagcttcgggagactacgcttgctcatgatgacgaaatc
tcaagaaacattctgggccttgcacgaacccgccctgacattttcggtaccacagaggat
gaagtttctaacgctgtcaagactgagattgaaagaaagaaagatgagcaaccacaacag
gtcatccgggatggtcacactggaagcactagccgcacagaaaatcatgtccttaacaat
gatgcaaggaaccttcctggtcctgcagctcctcctctgtctagacccccagttgtccaa
tatcaatcagttagaccacccccacccggttcttggtttacagtcatgcaagttccccga
gcttataacccccttgctgttcctccacctacaatacagatgatgccaccaccacctttg
cctcaggggatgcctccaccaccacttccagaagaacctgcgccaaagcggcagaagctt
gatgattctacgcttattccagaagatcagtttttggcacagcattcgggacctgtccac
atcacagtatccgtccccaatgttggtgaaggtaatctgaagggacaacttttggagatt
atggtgcagtctttatctgaaaatgttggaagtctgaaagaaaaaatctctggggagatc
cagcttcctgcaaacaagcagaaactgagtggaaaacctggttttctcaaggaaaatatg
tcgcttgcatattacaatgttggagcaggagaaacacttactctttcattaagagagcgt
ggtggaagaaagcgatga

DBGET integrated database retrieval system