Prunus mume (Japanese apricot): 103328690
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Entry
103328690 CDS
T03196
Name
(RefSeq) DNA ligase 1
Organism
pmum
Prunus mume (Japanese apricot)
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
UBA_4
Motif
Other DBs
NCBI-GeneID:
103328690
NCBI-ProteinID:
XP_016649480
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Position
LG4:complement(13014804..13027867)
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AA seq
1153 aa
AA seq
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MESLRATYVIGKEKILLEIARRCNRKVHVDAQKMAVLRVLGYGESGVFTEDECESDVHVV
GWNVLGETWPYFRPNFVKMKEIMVEKGYSKVVGFVPTGWTYEVKRNKFSVRSKDSFEIHL
VPYSEHSNYDELREYVRFLKPKHVIPTVGLDVEKLDSKHANKMQKHFAGLVDEMANKKEF
LRGFLLGSTEVGNSVENESNNGPIEGLDQEKGAMPSDKDTVHMELSSSLQEPDPQNPMVL
NDEEAEKIIQELRDCLPTWVTQEQMLDLIGSSGGDIVESVSNFYERETEFHEQVISSTIA
VSESQTSSLCDSGSLPKGGSVKSSPYGSTDVPSSQEYISLKPRNVIKSGISPGKRARNTN
NKVNKKVKLNSKLDSRGPKQLAITKFFSKVLPDVQETPEIGSMDEQNVKDESLPHDDTKS
YRDEIDQFLQIIDGTESLESYAATILRKTNGDINEALNIYYCNREVRSGKNEAGLVVDSG
KMKPTADSSVEVSLQEKVKTTVLSLPPEKYDPTEDACWSCGQRAPYLHLARTFDLLEDEK
GKIKATSMLCNMFRSLLALSPEDVLPSVYLCTNKIAADHENVELNIGGSLVTSALEDACG
TSRSKIREMYNELGDLGDVAQACRQTQKLLAPPSPLLIKDVFFALQKISVQTGSGSTGRK
KSLIVNLMRSCREKEMKFLVRTLVRNLRIGAMMKTVLPALAQAVVMNSSHNFNHEGAVQS
LKDRLQLHSAAVVEAYNVLPNLDLVVPSLMDKGIGFSSSTLSMVPGIPIKPMLAKITNGV
QQALKLLGNKAFTCEYKYDGQRAQIHKLVDGSVRVFSRNGDESTSRFPDLIKIINESCKP
DAVTFILDAEVVAIDRKNGLKLMSFQELSSRGRGSRDTSITLDSIKVDICVFIFDIMFAN
GQQLLGFPLRKRRKYLKDMFYDEKLGYFEYAKEMTVEADDACLTSEATLTKINCFLENAF
LSSCEGIMVKSLDVDAGYSPSKRTDTWLKVKRDYMEGSNDSLDLVPIGAWHGNGRKAGWY
SPFLMACYNPDTEDFQSVCRVMSGFSDSFYTEMKSFFSGDKILSRKPLYYKTAEAPDMWF
PPELVWEIRGADFTVSPVHQAAVGLVHPSRGISIRFPRYVRTVADRKPDECSTSEDIAAM
FCSQTRKMDVAED
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtttgagagctacttatgttattgggaaagagaagattttgctggaaattgct
cgtaggtgtaatcgtaaagtacatgtggatgctcaaaaaatggcggtgttgcgtgttttg
ggctacggagagagtggggtatttacagaggatgagtgcgaaagtgatgtacatgttgtt
gggtggaatgtcttgggcgagacttggccatattttaggcctaattttgtgaaaatgaag
gagattatggttgagaaaggatactctaaggttgtgggttttgttcctactggttggact
tatgaagtgaagcgtaacaagttttcagtgaggtcaaaggattcatttgagatccatctt
gtaccgtatagtgaacattctaactatgatgaacttagggaatatgtgaggtttttgaaa
ccaaagcatgttattcctacggtgggcttggatgttgaaaagcttgatagtaagcatgcc
aataaaatgcaaaagcattttgctgggttagtcgatgaaatggcaaacaagaaagagttc
ttgaggggctttcttcttggatccacagaagttggtaacagtgttgaaaatgagtccaac
aatggtcctattgaagggctggatcaagagaaaggggcaatgccatctgataaggatact
gtgcacatggaattatcatcttctctacaagaacctgatccacaaaatccaatggtatta
aatgatgaagaagcagagaaaatcattcaagaacttcgtgattgtttgcccacatgggtc
actcaagagcagatgttagatctgattggaagctcaggaggggacattgttgaatcagtt
tccaatttttacgaacgtgaaacagaatttcatgagcaagtaatttcttctacaattgct
gtttctgaatcccagaccagctcactttgtgactctggatcactcccaaaaggaggttct
gttaagagcagtccatatggaagtactgacgttccttcaagtcaagaatatatctcactg
aagccaaggaatgtaattaaaagtggaatttctcctggaaaaagggcgagaaacactaat
aataaggtaaacaaaaaagttaaattaaattccaaattggattcacgtgggccaaagcaa
ctggcaataacaaagttttttagtaaagttttgcctgatgttcaagaaactccggagatt
ggatcaatggatgaacaaaacgttaaagatgaaagtttgccccatgatgacaccaaatca
tacagagatgagatagatcagtttcttcagataatagatggtactgaatcattagaaagc
tatgctgccaccattctgaggaagacaaatggagatatcaatgaggcgctgaatatatat
tactgtaatcgcgaggttaggtctggtaaaaatgaagcaggattggtggttgattcaggg
aaaatgaagccaacagctgattcatctgtggaggtatcattacaagagaaagtaaaaaca
actgttctgtcattaccaccagaaaaatacgatcctacagaagatgcgtgctggagctgt
ggacagcgcgctccgtatttacatcttgcacgaacttttgacttacttgaggatgaaaaa
ggcaagataaaagctacttctatgctctgcaatatgttcagaagtttgcttgccttgtct
cctgaggatgtgctgccttcagtgtatttgtgcacaaataagattgctgcagaccatgaa
aatgtggagctaaacattggtggaagtttggtcacatcagcattggaagatgcatgtggt
acaagccgatccaaaataagggagatgtacaatgagttgggtgatctaggtgatgtggct
caagcatgccggcagacacagaagctacttgcccctccttcaccgcttctaataaaagac
gtatttttcgcactccaaaagataagtgtacaaacaggtagtgggagcactggtcgaaag
aaaagcctcattgtgaatctcatgcgctcttgtagagagaaagaaatgaagtttcttgtt
agaactttggttaggaatttgcggattggagcaatgatgaaaactgttctacctgctctg
gctcaagctgttgtcatgaattcctctcataacttcaatcatgaaggagcagtacaaagt
ttgaaagataggcttcagctccattcagcagctgtagtcgaagcatacaatgtactgccc
aatttggatttggtcgttccttctctcatggacaaaggcattggattctcttcatcaact
ttgtcaatggttccaggaatacctattaagccaatgcttgcaaaaatcacaaatggtgtt
cagcaagcactaaaactcttaggaaataaagcttttacctgtgaatacaaatacgatggt
cagcgtgcccaaattcataaattagttgatgggtctgtgcgtgttttttcacgaaatggg
gacgaatcaacgtcaagatttccagatctgatcaagataataaatgaatcttgtaagcct
gatgcagtcactttcatactagatgcagaggtggttgcaattgataggaagaatggtctg
aagctaatgtctttccaagagttgtcttcacgtgggagagggagcagagatacatcaatt
acattggatagcataaaggtcgacatttgtgtatttatctttgatatcatgtttgccaat
ggacagcagttgttgggctttcctctaaggaaaagacgaaaatatttgaaagatatgttt
tatgatgagaagttgggttattttgagtatgccaaggaaatgacagtcgaagcagatgat
gcttgtttaaccagtgaagcgacgttaacgaagatcaactgttttctcgaaaatgcattc
ctctcctcatgtgaagggattatggttaaatctttagatgttgatgctggatattctcca
tcaaagcgtacagatacatggttaaaggtaaagcgagactacatggaaggatcaaatgac
tctcttgatttagtcccaattggagcttggcatggaaacgggagaaaggcaggctggtac
agtccatttcttatggcatgttataaccctgatactgaggatttccaaagcgtctgccgt
gtcatgtctgggttctcagattcattttacactgagatgaaaagtttcttttctggagac
aagatcttgtccagaaaaccactttattataaaaccgctgaggcgcctgatatgtggttt
cctccggaacttgtatgggaaataagaggtgcagactttactgtgtcccctgtccaccaa
gctgccgtaggtttagttcatccatcacgtggaatttcaatcagattcccaagatacgtt
cgcactgtggctgatagaaaaccagatgaatgtagcacatctgaagatatagctgcgatg
ttttgttcccagacaaggaagatggacgttgctgaagattga
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