Prunus mume (Japanese apricot): 103332629
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Entry
103332629 CDS
T03196
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00450
Selenocompound metabolism
pmum00970
Aminoacyl-tRNA biosynthesis
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
103332629
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103332629
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmum01007
]
103332629
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103332629
Enzymes [BR:
pmum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
103332629
Amino acid related enzymes [BR:
pmum01007
]
Aminoacyl-tRNA synthetase
Class I (U)
103332629
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
103332629
Prokaryotic type
Other AARSs
103332629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Toprim
FMN_red
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
103332629
NCBI-ProteinID:
XP_008233599
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All DBs
Position
LG5:20491184..20495921
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AA seq
603 aa
AA seq
DB search
MAAAAARINFFLNPINPLNSKATTHLRTRLHFQPSRRRPRATSFCTRASATPLHDEAAAS
DPFVLTTPLYYVNAPPHLGSAYTTIAADAIARFQRLLGKKVIFITGTDEHGEKIATAAAD
SASTPAQHCDIISQSYISLWKNLDIAYDKFIRTTDPKHEAIVKEFYSRVLANGDIYRADY
EGLYCVNCEEYKDEKELLDNNCCPTHLKPCVARKEDNYFFALSKYQKSLEETLAKNPNFV
QPSFRLNEVQSWIRSGLRDFSISRALVDWGIPVPNDSKQTIYVWFDALLGYISALSEDTE
QPDLERAVSSGWPASLHLIGKDILRFHAVYWPAMLMSAGLGLPKMVFGHGFLTKDGMKMG
KSLGNTIEPNDLVHKFGSDAVRYFFLREVEFGNDGDYSEDRFINIVNAHLANSIGNLLNR
TLGLLKKNCQSTLLVDSSIAAEGITFKDTVEKLVEKARVQYGNLSLSSACEAVLEISNAG
NLYMDGRAPWSLFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPSLSWRIYGQLSYSK
EQFDAATWSDTKWGGLKSGQVMAQPKPIFARIENPTEEQNGVEAPKKAVMKDKLPQAKRV
VEA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcagcagcgagaataaacttcttcttaaaccccataaatcccctcaactcc
aaagccaccacccatctcaggacccgcctccactttcagccatcaagaagaagacccaga
gctacgtcgttttgcacgcgtgcctcggctactcccctccacgacgaagccgccgccagt
gacccttttgtcctcaccactccactttattacgtgaatgcccctcctcatttgggcagc
gcttacaccaccatcgctgccgatgccattgctcgctttcagaggctgttgggtaagaag
gtcatcttcatcactggcactgatgagcatggtgaaaagattgccactgcagctgctgat
agtgcctccacaccagctcaacactgtgacatcatttcacagtcttacatatcactctgg
aaaaacttagatatagcttacgacaaattcattcgaacaactgatcccaagcatgaagca
attgtgaaggagttttactcaagggttcttgccaatggagacatttacagggctgactat
gagggactttattgtgtcaattgtgaggagtataaggatgagaaagaactgcttgataac
aactgttgccctacgcacctaaagccatgtgttgcacggaaagaggataattacttcttt
gcattgtccaagtatcaaaagtcgttggaagaaactttggcaaaaaatccgaattttgta
cagccttcattccgtcttaatgaggttcaaagttggattagaagtggcctaagagacttt
tccatttctcgagcattagtggattggggcatccctgttcctaatgatagcaagcaaaca
atatatgtttggtttgatgctttactgggttatatatcagccctatctgaagatacggag
caacctgatttggaaagagccgtttcatcagggtggcctgcctcgctacacttgattggc
aaggatattttacgtttccatgcagtctactggccagctatgctgatgtctgctggacta
ggccttcctaagatggtgtttggccatggattcttgacaaaggatggcatgaagatgggg
aagtcgctgggcaatacaattgaaccaaatgatttggttcataaattcgggtctgatgcg
gtcaggtacttcttcctcagggaggtggaatttggaaatgacggggactattcagaagat
cgtttcatcaatattgtcaatgctcatcttgccaattcaattggaaatctgcttaaccgt
actctgggacttcttaagaagaactgccaatcaactttgttggttgattcaagtattgca
gctgaaggaattacatttaaggacactgtggagaagttggtggaaaaagctcgggttcag
tatggaaacctctcgctgtcatcagcttgtgaggctgtgctagagatcagcaatgctgga
aatttatacatggatgggcgcgcaccctggtctctttttaagcaagggggtgctgcttct
gaagccgctgcaaaggaccttgtgataatattagaagcaatgaggattatagcagttgca
ttatcacccgtcacgccgagcttatcttggagaatatatggacagcttagctactcaaag
gaacagtttgatgctgctacctggagcgacaccaagtggggtggcctaaagagtggtcag
gtcatggcgcaacctaaaccaatctttgcaaggattgaaaacccaacagaagagcaaaat
ggggttgaagcacctaaaaaggcagtcatgaaggacaagctacctcaagccaaacgggtg
gtggaagcgtaa
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