Prunus mume (Japanese apricot): 103333535
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Entry
103333535 CDS
T03196
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103333535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103333535
03029 Mitochondrial biogenesis [BR:
pmum03029
]
103333535
Membrane trafficking [BR:
pmum04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103333535
Atg1 complex
103333535
Mitochondrial biogenesis [BR:
pmum03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103333535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
103333535
NCBI-ProteinID:
XP_008234608
LinkDB
All DBs
Position
LG5:complement(24985289..24989204)
Genome browser
AA seq
620 aa
AA seq
DB search
MDFQNNFQLESGKLEQIVSQFLLKSLHIVLDSRIPSLHPHDRSGDLSSVPQVRKSDKWFN
LILGDRPAARENLNFWHRNVMDPMIIDIILVRGGPSSSSVDNLYVNSVEGTSVETIIERW
VVQYETPRVVAPQTGDTSASYKKTYKKSIILLRTLYSYMRLLPAYRIFRQLSTSSQTYNF
DIVYKVSSLRDPFSRAEEELMEEYSFAPVEAHPGCLSLSVTYRSTLSDFNLEPAAPMPPR
IITDYVGSPATDPLRSFPSSEKGSFPRGGIPPPYTVPLQRPHSWTSGFYRPPPFIHNKPL
VGSPPAYRAPPMSHDVGSPPIDTFANRVQNYRPLGGHQRNMSYDEYQLSPPFSPSPSPSP
PTYLSSGNLNPMQTRIRSGTAPVSIPLPMGSRSPRYLSPNFSDPSRNSLPPLSPRSIRND
ASSQESSSVIRAFRKLEASRTGEMHPGTSNHMVGQKVMKDSKDDSGRFSGLLSSSGSPRV
GFSRSSSRLSFQDDLDGFEFSCPFDVDDVDTSDSQVSQNLDGRKASEYTSQSLPIGRKSH
DAAVGVLVQMLRTAPPLRQDSSCYSSQSLKPEHEGGVATASGFFMPRKTSDALEELRSYK
EMKDLLLSKSGMRVLAKEEA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagaataattttcagctcgaatcagggaaattggaacagatagtttcccag
tttctactgaagagcttgcatattgttttggactctaggatcccttctcttcacccacac
gatcgcagtggtgacctgtcatccgttcctcaagtgagaaagagtgacaagtggttcaac
ttaatactaggggaccgccctgcagctcgtgaaaatttgaatttctggcacagaaatgtg
atggatccaatgataattgacataatacttgttcgtggagggcctagttcttcttctgtt
gacaatctatatgtgaattctgtggaggggacatctgttgagacgattatagagaggtgg
gttgtccagtatgaaactccgcgggttgtggctccccaaactggtgacacttcggcctct
tataagaagacatacaagaagtcaatcatacttttacgtactctttattcatatatgagg
cttcttccagcttataggatctttagacagctaagtacatctagtcagacttataatttt
gatattgtttacaaggtgtcttcacttagagatccattctcaagggcagaggaggaacta
atggaggagtacagttttgctcctgtagaggctcatcctggctgcctttctttatccgtg
acttaccgttcaacactatctgatttcaatcttgagcctgcagcaccaatgccaccaagg
ataattacagattatgttggtagtcctgccactgaccccctgaggtctttcccctcatca
gagaagggttcctttccgcgaggaggaataccaccgccatatactgtgccacttcaacga
ccacacagctggacaagtggcttctacaggccacctccttttattcacaataaaccccta
gtcggatctccacctgcatatcgtgcacctccaatgtcacatgacgttggatctcctcct
attgatacatttgctaacagagttcaaaactatagacctctaggtggtcatcagagaaat
atgagttacgatgagtatcagctttcacctccattttcgccatctccatccccatctccc
ccaacatacttgtccagtggaaatttaaatcctatgcaaactcgaattcgttcaggaact
gcccctgttagtatccctcttccaatggggagcagaagccctagatacctgtcccccaat
ttttctgatccaagtagaaattctcttcctccattatcacccagaagcataaggaatgac
gcttcctctcaagagtcttcatctgtaatcagagcatttagaaaattagaggcttcaagg
accggtgagatgcaccctggaacatcaaatcatatggttggtcagaaggtgatgaaagac
agtaaagatgattcagggcggttctcaggattgttgtcttctagtggctcaccacgtgtt
ggattttctagaagctccagtagattatctttccaggatgatttggatggttttgagttc
tcatgtcctttcgacgtggatgatgttgatacatcagattctcaagtcagtcaaaatctc
gatggcagaaaagcttctgagtatacatcacagtcattgccaataggcagaaaatcacat
gatgctgcggttggcgttctggttcagatgctgaggacagctccacctctgcgccaagat
tcaagttgttactcatcccagtctttgaaacctgaacacgagggaggagttgcaacagct
tctggtttctttatgcctcggaagacatctgatgcgctggaggagctcagaagttataaa
gaaatgaaagaccttctactatcaaagagtggaatgagggtgcttgctaaagaagaagca
taa
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