KEGG   Prunus mume (Japanese apricot): 103340400
Entry
103340400         CDS       T03196                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03083  Polycomb repressive complex
pmum04120  Ubiquitin mediated proteolysis
pmum04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103340400
   04120 Ubiquitin mediated proteolysis
    103340400
  09126 Chromosome
   03083 Polycomb repressive complex
    103340400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmum04131]
    103340400
   04121 Ubiquitin system [BR:pmum04121]
    103340400
   03036 Chromosome and associated proteins [BR:pmum03036]
    103340400
Membrane trafficking [BR:pmum04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    103340400
Ubiquitin system [BR:pmum04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     103340400
   Cul7 complex
     103340400
Chromosome and associated proteins [BR:pmum03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     103340400
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     103340400
SSDB
Motif
Pfam: Skp1 Skp1_POZ Methyltransf_16
Other DBs
NCBI-GeneID: 103340400
NCBI-ProteinID: XP_008242039
LinkDB
Position
LG8:complement(12381841..12383397)
AA seq 157 aa
MSSPSKRITLKSSDPALFEVDETVARESQIIKYMIEDDCADECIPVPNVKGNILAKVIVY
CKKHADAAKPDSKITEYDLRAWDQDFLDDVNQETIFDLILAANFLNIKSLLDLTCQRIAD
MIKGKNPAEIRKTFNLKDQFTPEEEEEVRRENSWAFE
NT seq 474 nt   +upstreamnt  +downstreamnt
atgtcgtcgccgtcgaagaggatcaccctgaagagctctgatcccgcacttttcgaggtt
gacgagacggtggctcgcgagtcgcagatcatcaagtatatgatcgaggacgattgcgcc
gacgaatgcattcctgtacccaacgtgaagggcaatatcttggccaaggtcatcgtgtac
tgcaagaagcacgccgacgctgctaagcctgattcgaagatcaccgagtacgatctcagg
gcttgggatcaggactttctcgacgatgttaaccaggaaaccatatttgatctcattctt
gctgcaaacttcttgaacatcaagagcctgctggacctgacatgccagcgtattgcagac
atgatcaaggggaagaatccggcagagatccgaaagaccttcaatctaaaggaccagttc
accccggaggaggaggaggaagttcgccgtgagaactcgtgggcatttgaatga

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