KEGG   Prunus mume (Japanese apricot): 103341016
Entry
103341016         CDS       T03196                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03008  Ribosome biogenesis in eukaryotes
pmum03013  Nucleocytoplasmic transport
pmum03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103341016
   03008 Ribosome biogenesis in eukaryotes
    103341016
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103341016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103341016
   03009 Ribosome biogenesis [BR:pmum03009]
    103341016
   03016 Transfer RNA biogenesis [BR:pmum03016]
    103341016
   03036 Chromosome and associated proteins [BR:pmum03036]
    103341016
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmum04147]
    103341016
   04031 GTP-binding proteins [BR:pmum04031]
    103341016
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     103341016
Ribosome biogenesis [BR:pmum03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    103341016
  Pre-60S particles
    103341016
Transfer RNA biogenesis [BR:pmum03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    103341016
Chromosome and associated proteins [BR:pmum03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     103341016
   Spindle formation proteins
    103341016
Exosome [BR:pmum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103341016
GTP-binding proteins [BR:pmum04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    103341016
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid AAA_16 Septin AAA_7 AAA_22
Other DBs
NCBI-GeneID: 103341016
NCBI-ProteinID: XP_008242718
LinkDB
Position
LG8:15470998..15473758
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDTNLHFV
ESPALAPPEVHIDLAAQQQHEAELAQAANQPLPDDDDDAFE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctttgccaaaccaacagactgttgattatccaagctttaagcttgtcattgtcggc
gatggaggcactggaaaaaccacttttgtgaagaggcatctcactggagagtttgagaag
aaatatgaaccaaccattggtgtggaggttcatcctttggatttcttcacaaattgcgga
aagatccgcttttactgctgggatactgctgggcaagagaagtttggtggtcttcgggat
ggctactatattcacgggcaatgtgcaatcattatgtttgacgtcacagctaggttgaca
tacaagaatgttcctacatggcaccgtgatctctgtcgggtctgtgagaacatacccatt
gttctctgtggaaacaaggttgatgtgaagaacaggcaggttaaagccaagcaggttacc
ttccacaggaagaagaatctgcaatactatgaaatatcggcaaagagcaactacaatttt
gagaagcctttcctctacctggctaggaagcttgcaggtgacacaaatcttcatttcgtt
gagtctcctgcccttgctcctccagaagtacacattgacttggctgctcaacaacagcat
gaagcggagcttgcacaggcagccaatcagcctcttcctgatgacgatgatgatgcattt
gagtag

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