Prunus mume (Japanese apricot): 103343866
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Entry
103343866 CDS
T03196
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL30
KO
K12900
serine/arginine-rich splicing factor 10
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103343866
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103343866
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103343866
Protein phosphatases and associated proteins [BR:
pmum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103343866
Spliceosome [BR:
pmum03041
]
Common components
Common spliceosomal components
SR proteins
103343866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
103343866
NCBI-ProteinID:
XP_008245729
LinkDB
All DBs
Position
Unknown
AA seq
269 aa
AA seq
DB search
MRRYSPQYYSPPRRSYGGGGGGGGRGRSPPRRRKEQNSGSLLVRNIPLDCRPEELRVPFE
RYGLVRDVYIPKDYYTGEPRGFAFVQFVDSYEAAEAQYHMNGKIFAGREISVVVAAETRK
RPEEMRQRTRVRGPSEHGGRRSSYYGRSRSRSRSPHYPSSSRSRYRSRSYSPAPRRRGDS
VSPSRRRRDHPRSPRDLPLERDADHDRRPYSPGYDNGAGPNENDGYEKKPMHEDKDGRGH
WRSPSPGRASRSPSGSRSRSAELSPRRSR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggtacagcccacagtactatagtcctccaaggaggagctatggcggaggcggt
ggcggaggaggacgaggaagaagccccccaaggaggcgcaaggagcagaatagtggaagc
cttttggtccggaacattcctcttgattgcagacctgaagagctacgagttccctttgaa
agatatgggcttgttcgggatgtctacattcccaaggactactacactggggaacctcgg
ggatttgcatttgtgcaatttgtggattcttatgaagctgcagaggctcagtatcatatg
aacgggaaaatttttgctgggagggagatatctgtggttgttgctgcagagacaaggaaa
aggccagaggagatgcgtcaaaggactagggttagagggccgtcagagcatggaggaagg
cgatcgtcttattatggacgttctcgttctcgttcacgttcgccacattatccatcaagt
tctagaagccgataccgctcaaggtcctattcacctgctccaagacgccgtggtgactct
gtttccccaagtagaaggcgcagagaccacccaagatcaccacgtgatcttccactagag
cgagatgctgatcatgatcgcaggccatattctccaggttatgacaatggtgctgggcca
aatgaaaatgatggatatgaaaagaaacctatgcacgaggataaggatggaagaggtcat
tggaggtctcctagtcctggtagagcatccagatcaccatctggatctaggtccagatct
gctgagttatcgcctaggcgcagcagataa
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integrated database retrieval system
