Pedobacter mucosus: LOK61_08235
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Entry
LOK61_08235 CDS
T08291
Symbol
recR
Name
(GenBank) recombination mediator RecR
KO
K06187
recombination protein RecR
Organism
pmuo
Pedobacter mucosus
Pathway
pmuo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOK61_08235 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmuo03400
]
LOK61_08235 (recR)
DNA repair and recombination proteins [BR:
pmuo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LOK61_08235 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LOK61_08235 (recR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH_5
HHH
NapD
IMS_HHH
ZZ
Motif
Other DBs
NCBI-ProteinID:
UKT65769
LinkDB
All DBs
Position
complement(1990087..1990704)
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AA seq
205 aa
AA seq
DB search
MNFSSKLLEDAVNEFSKLPGVGKKTALRLVLHLLNKEQEEVNQFGNTLIKLKQQIKNCTI
CRNISDYDICEICTSQKRDKKTICVVEDTRDVMAIENTSQYFGVYHVLGGLISPMDGIGP
ADLFIDGLVMRVAKGEIQEVILALSPNMEGDTTLFYLFKKLKDFNIPITTIARGIAFGGE
LEYTDEITLGRSIITRVPYETAMMK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttcatccaaactgctggaagatgcggtaaacgaattctcaaaattgcctggt
gttggaaaaaaaacggctttaaggttagttctgcaccttttaaataaggaacaagaggaa
gttaatcagtttggaaatacgctaattaagctaaaacaacagattaaaaattgcactatt
tgccgtaatatttctgactacgatatctgcgaaatttgtacatcgcaaaagcgagataag
aaaacgatttgcgttgtcgaagatactcgcgatgtaatggcgattgaaaatacttctcaa
tattttggtgtttaccatgttttaggcggcttaatttcgccaatggacggaattggacca
gcggatttatttattgatggactcgtaatgcgggttgctaaaggagaaatacaagaagta
attttagcattaagtcctaatatggaaggagatacaacacttttttacctatttaaaaag
ttaaaggattttaatattcccattacaaccattgcaagaggaattgcttttggtggcgaa
ttagaatatacggacgaaattactttaggacgttctataattactagagttccgtatgaa
accgcaatgatgaagtaa
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