Protobothrops mucrosquamatus (Taiwan habu): 107299002
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Entry
107299002 CDS
T05763
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur04010
MAPK signaling pathway
pmur04210
Apoptosis
pmur04218
Cellular senescence
pmur04620
Toll-like receptor signaling pathway
pmur04621
NOD-like receptor signaling pathway
pmur04622
RIG-I-like receptor signaling pathway
pmur04623
Cytosolic DNA-sensing pathway
pmur04625
C-type lectin receptor signaling pathway
pmur04920
Adipocytokine signaling pathway
pmur05132
Salmonella infection
pmur05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107299002 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107299002 (NFKB1)
04218 Cellular senescence
107299002 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107299002 (NFKB1)
04621 NOD-like receptor signaling pathway
107299002 (NFKB1)
04622 RIG-I-like receptor signaling pathway
107299002 (NFKB1)
04623 Cytosolic DNA-sensing pathway
107299002 (NFKB1)
04625 C-type lectin receptor signaling pathway
107299002 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
107299002 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107299002 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
107299002 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmur03000
]
107299002 (NFKB1)
Transcription factors [BR:
pmur03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
107299002 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
107299002
NCBI-ProteinID:
XP_015683855
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MADENSYLLGMGEHQVYAMDHFPLGMNQLYNNTSMISTDLPLRTTDGPYLQIVEQPKQRG
FRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKHVHLHAHSLV
GKHCEQGVCTVNAGPKDMVVGFPNLGILHVTKKKVLETLETRMIDACRKGYNPGLLVHPD
LNYIQVEGGGERQLTEREREIIRQAAHQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLQPV
LSDPIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQIRFYEEDESGGVW
EGFGDFSPTDVHRQFAIVFKTPKYRDVNITKAASVFVQLRRKSDLETSEPKPFLYYPEIK
DKEEVLRKRQKLMPNFSDSFGGSGAGAAGGGMYGGVGGGGGGSAGSGYGYPPYGFSSYGA
MHFHSSTNKSGAGMKHEVSNSMPKGENEMCCNKKHNKKVKEKVEIEDKSETSTDSVSGME
EDAGTNIHLQDAFFLEKAMELAKRHANALFDYAVTGDVKMLLAVQRHLTAVQDENGDNVL
HLAIIHLHTELVKNLLEVIANMNAADVLNVRNDLYQTPLHLAVITRQARIVKALLGAGAD
VNLLDRHGNSVFHLAAQQGDEAVLSMLLQHKEASVMRDLPNGDGLTVLHLAVTANSMPCL
RQLLAVGIDVNIQEQKSGRTALHLAVEQGNISMAGCLLLEGDAFVDSVTYDGTTPLHIAA
GRGSTKLAALLKAAGADPHIENFEPLFEEEDVKDNEGEKIIPGTTPLDMATSWQVYDILS
NKLCKSKAASEDLLIRGNMKDLNEDVKLQLYKLLEVPDLNKSWSMLAQKLGLGILNNTFR
LSPSPSKTLLDNYEVSGGTVRELIDALREMDYPEAVELIEKRTTSSSQEKTKDDVLPFCD
LPSPGTEQADEMCNFKFQDAESICDSGVEISLHKLSFTYSDSFTNKTSINLKKKASGYGQ
DTSLQGKIEVT
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgagaattcttacctcttgggaatgggagaacatcaggtatatgcaatggac
catttccccttggggatgaatcagctgtacaataacacaagcatgatttcaactgatctg
ccacttcgcacaactgatgggccatatcttcaaatagttgaacaacctaaacagagaggc
tttcgtttccgctatgtttgtgaaggaccatcccatggtggacttcctggagcttctagt
gaaaagaacaaaaagtcttatccacaagtcaaaatctgcaattatgttggacctgcaaaa
gtaatagtgcagttagtcacaaatggaaaacacgtccacttgcatgctcacagcttggta
ggaaaacattgtgagcagggggtatgcacagtaaatgcaggaccaaaggacatggtagtg
ggatttcctaacctgggaatattacatgttacaaagaaaaaagtattagaaacactggaa
acccgcatgattgatgcgtgtagaaaagggtacaatccaggactcctcgttcaccccgac
ctcaattatatacaagtagaaggtggaggggagaggcagctaacagaacgagaacgcgaa
atcattcgtcaggcagcacatcaacaaactaaggagatggatctcagtgttgttcggctc
atgttcactgcatttcttcctgatagcactggtagctttacaagaagacttcagcctgtc
ttgtctgaccctatatatgacagcaaagctccaaatgcatccaatttaaaaattgtacgg
atggatcggactgcaggctgtgtaacagggggagaagaagtttacctcctttgtgacaag
gtccagaaagatgatattcaaatccgtttttatgaagaagatgaaagtggtggtgtctgg
gaaggttttggagacttttcgcctactgatgtgcacagacagtttgcaatagtattcaaa
acaccgaagtatcgagatgtcaacattacgaaagcagcatctgtttttgttcaattacga
cgaaaatcagatctagagaccagtgaaccaaagccttttctgtactatcctgaaatcaaa
gataaagaagaagtactaagaaaacgacagaagctcatgccgaatttctccgatagcttt
ggtggaagtggcgcaggtgctgcaggaggtggaatgtacggaggagtaggaggaggaggc
ggtggcagtgctggatcaggatatgggtacccaccatatgggttttccagttatggcgca
atgcatttccattccagcacaaacaaaagtggtgcaggaatgaaacacgaagtctcaaat
agcatgcccaaaggggagaacgaaatgtgctgtaacaaaaaacacaacaagaaagtaaag
gaaaaagtagagattgaagataaaagtgaaaccagcaccgactcggtttctgggatggaa
gaagatgctggtactaacattcatttacaagatgccttctttttggaaaaagccatggaa
cttgctaagcgacacgctaatgccctttttgactatgcagtcacaggagatgtaaagatg
ctcctggcagtacagcgccaccttacagctgttcaggatgaaaatggtgataatgtcctc
cacttggcaattattcaccttcacacggaactggtgaagaaccttttagaagtaatagca
aatatgaatgctgctgatgttctcaatgtgagaaatgatctttaccagactcctttacac
ttggctgttataacaaggcaagcgagaattgtgaaagccttgcttggagctggggccgac
gtgaacctcttggatcgccatgggaattctgtcttccatttggcagctcagcaaggagat
gaggcggttttaagtatgttgcttcagcacaaagaggcatctgtgatgagagatcttcct
aatggggacggcctgacagtccttcacttagctgttactgcaaacagtatgccgtgtctc
agacaactccttgctgttggtattgatgtcaatatccaggaacagaaatctggaaggaca
gctttgcacttggctgttgaacaaggaaatatttccatggcaggttgccttctacttgag
ggagatgcatttgtggacagcgttacttatgatggaaccactccacttcatatagcagct
ggaaggggatctacaaaattggcagctcttctcaaagcagcaggtgcagatccccacatt
gaaaactttgagccgttatttgaagaggaagatgtgaaagataatgaaggtgaaaaaatt
atacctgggacaacgcctctggatatggcaaccagttggcaggtgtatgatattttgagt
aacaaactctgtaagtcaaaggcagcttctgaggatctactgattcgaggcaatatgaaa
gacctgaatgaggatgttaaattacagctgtacaaattgcttgaagttcctgatctgaat
aaaagctggtccatgttggcacagaagctaggtctagggatattaaacaatacctttcgg
ttgagtccttctccatcaaaaactctactggataattatgaggtttctggtggaacagta
agagaattgattgatgccctcagagaaatggattatccagaggctgttgaattaattgag
aaaagaactacttcgtctagccaggaaaaaaccaaagatgatgttcttccgttttgtgat
ttaccttctcctgggacagaacaagcagatgaaatgtgtaatttcaaattccaggatgct
gaaagcatttgtgacagtggcgtagagatctctcttcacaaacttagctttacatattct
gattcttttaccaacaagacatcaataaatcttaagaaaaaggcttcaggctatggacag
gacacctcattacaaggtaaaattgaagtaacttaa
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