KEGG   Paenibacillus mucilaginosus K02: B2K_12050Help
Entry
B2K_12050         CDS       T02041                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pmw  Paenibacillus mucilaginosus K02
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmw00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    B2K_12050
   03410 Base excision repair
    B2K_12050
   03420 Nucleotide excision repair
    B2K_12050
   03430 Mismatch repair
    B2K_12050
Enzymes [BR:pmw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     B2K_12050
    6.5.1.6  DNA ligase (ATP or NAD+)
     B2K_12050
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     B2K_12050
DNA replication proteins [BR:pmw03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    B2K_12050
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     B2K_12050
DNA repair and recombination proteins [BR:pmw03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     B2K_12050
   NER (nucleotide excision repair)
    Other NER factors
     B2K_12050
   MMR (mismatch exicision repair)
    Other MMR factors
     B2K_12050
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2778736..2779590
Genome map
AA seq 284 aa AA seqDB search
MFISPMLLETAKHPFSNEHYLFEPKIDGHRLVLSRQGGQTRLYTRHHNDCTFQYPELNPI
ALDDVILDGEVAATDASGAIDFEAVMERFALRRADKVRRAAAERPVNYIVFDVLRYNGVD
LRGLPLYRRKEILAGIDFGNPYMAKVPVVPKEGERLFEQIAARQLEGIVAKRMDSVYVGH
RSEAWLKIINWQYAEVYLTGYKKEGFGWLAASAGPGGILKPAGLIELGITPKHRTAFNGV
RDQLQTGEDGEFVYLEPKLKAKVKMRNWTRAGLLRSPVFMEFCR
NT seq 855 nt NT seq  +upstreamnt  +downstreamnt
gtgtttatttctcccatgctgctcgagacggcgaagcatccgttctcgaacgagcattat
ctgttcgaaccgaaaatcgacggtcaccgtctggtgttatcccgccaaggcggtcagacc
cgtctctatacgcgtcatcacaatgactgcacgttccagtatccggagctgaacccgatc
gccttggacgatgtcatcctcgacggggaggtcgcggcgacagacgcttccggcgccatc
gacttcgaagccgtaatggaacgcttcgccctgcgcagggcggacaaagtgcgccgggcc
gccgccgaacggccggtcaactacatagtattcgacgtgctgcgctataacggggtggac
ctgaggggcctgccgctgtacaggcgcaaggagattctcgccggcatcgacttcggcaat
ccgtatatggcgaaggtgccggttgttccgaaggagggcgagcggctcttcgaacagatc
gcggcacggcagctggaaggcatcgtcgccaaacggatggattccgtctatgtcggccac
cggtcggaggcctggctcaagatcatcaactggcagtacgcggaggtgtatctgaccgga
tacaagaaggaaggattcgggtggctggccgcctcagcggggccgggagggatcctgaag
cccgccggcttgatcgagcttggcattacgccgaagcacagaacagcgttcaacggtgta
cgggaccagcttcagaccggggaggacggggagttcgtctatctggagccgaagctgaag
gcgaaggtgaagatgcgcaattggacccgggccggacttctccgttccccggtgttcatg
gaattctgcaggtaa

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