Paenibacillus mucilaginosus K02: B2K_25615 Help Entry B2K_25615         CDS       T02041                                  Name (GenBank) DNA polymerase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism pmw  Paenibacillus mucilaginosus K02 Pathway pmw03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:pmw00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     B2K_25615  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pmw03400]     B2K_25615 Enzymes [BR:pmw01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      B2K_25615 DNA repair and recombination proteins [BR:pmw03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      B2K_25615 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol Motif Other DBs NCBI-ProteinID:  AFH64023 UniProt:  I0BNS6 LinkDB All DBs Position complement(6111106..6112011) Genome browser AA seq 301 aa AA seqDB search MTDERGIVQVDGVEVEISRPDKLLWPEPGITKLIYLQKLAALSPYLLPYCRDRHLTTRRF PHGVQGKFFYQKNAPGGRPDYVKTHLYEGVEYVNLDSLPVLLWLGNLAALEFHPSFETVH GEEPQEWVIDVDPEREGDPRLMEAAARVGEALEGMGLRSVPKTSGASGVQVVVPLTEGHT FEDLHRVGGFLARFLAEKFRTLFTVERLLKEREGRIYLDYVQVAAGKSMAAPYTPRATPE ATVSTPLTWDEVKTGVSPKAFHLLSIEKRLAEKGDLLAQAERQSLAPILKFLEKRPAALG R NT seq 906 nt NT seq  +upstreamnt  +downstreamnt atgacggacgaacgcggcatcgttcaagtggacggtgtggaagtggagatctcccgtccg gacaagctgctgtggccggagcccggcatcacgaagctgatttacctgcagaagctggcg gccctgtcgccttatctgctgccgtactgccgggaccggcatctgacaacacggcggttc ccgcatggggtgcagggcaagttcttctaccagaagaacgctcccggcggcaggcccgat tatgtgaagacccatctctatgaaggggtggagtatgtcaacctcgattcgctgccggtg ctgctgtggctcggcaacctggcggcgctggagttccatccgtccttcgagacggtgcat ggcgaggagccgcaggagtgggtcatcgacgtggatcccgagcgggagggcgacccccgt ctcatggaggcggccgcccgggtcggagaggcgctggaggggatgggcctgcgttcggtc cccaagacctccggagcctcgggcgttcaagtcgtggttccgctgacggagggacatacc ttcgaggatctgcaccgggtcggcgggtttctcgcccgctttctggccgagaaattccgt actctgttcacggtggagcggctgctgaaggagcgggaagggcggatctacctcgactac gtgcaggtggcggcgggcaaaagcatggcggcaccctatacgcccagggcgacgccggaa gccacggtatcaacgcccctgacgtgggacgaagtgaagacgggcgtctccccgaaggcg ttccatctgctctcgatcgagaagcggctggccgagaagggcgacctgctcgcacaggcg gagcggcagtcgctggcgccgattctgaagtttctggagaagcgcccggctgccttgggg agatag

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