KEGG   Paenibacillus mucilaginosus K02: B2K_34860
Entry
B2K_34860         CDS       T02041                                 
Name
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
pmw  Paenibacillus mucilaginosus K02
Pathway
pmw03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pmw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    B2K_34860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmw03400]
    B2K_34860
Enzymes [BR:pmw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     B2K_34860
DNA repair and recombination proteins [BR:pmw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     B2K_34860
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase DNA_ligase_C
Other DBs
NCBI-ProteinID: AFH65827
UniProt: I0BTY0
LinkDB
Position
8202839..8203789
AA seq 316 aa
MEWQPIVPFEPIRTETAPSGDGWVGQIKWDGTRILTYASGGTVRLFNRKGHERTLQYPEL
LDLSSYCTAESVILDGEVIAIADGRPNFQEVMRRDSVRKAQHLALAQKQVPISYMIFDMP
YLDGEWITDKPLRERQRLLQERVRGNATVQLVPSVAGMNDLFGVMKQHKMEGIVCKDLES
KYLIGGKDKRWQKMKIYNDLVAVVGGVTHRAGQVNALMLGLYDAEGRLWYIGHAGTGRFT
QQTWRELTEKVREMTLPERPFVNVPERSKDAVWIKPLLTVKVSYMEWTAGRTLRQPSIQA
LVGAQPADCTFGQLDG
NT seq 951 nt   +upstreamnt  +downstreamnt
ttggaatggcagcccatcgttccgttcgagcccatccgcaccgaaaccgcgccctccggg
gacgggtgggtcgggcagatcaagtgggacggcacccgtattctcacctatgcttccggc
ggcaccgtcaggctcttcaaccgcaagggccatgaacggacgctgcagtaccccgagctg
ctcgacctgtcctcctactgcaccgccgaatcggtcattctggatggagaggtcattgcc
atcgcggacgggcgcccgaacttccaggaggtcatgcggcgcgacagcgtccgcaaggcc
cagcacctggcactggcgcagaagcaggtgcccatctcctacatgatcttcgacatgccg
tatctggacggggaatggatcaccgacaagccgctgagagagcggcagcggctgctgcag
gagcgggtccgcggcaatgccaccgtgcagctggtgccgagtgtcgccggcatgaacgac
ctcttcggcgtaatgaagcagcacaagatggagggcattgtctgcaaggatctcgagagc
aaatatctgatcggcggtaaagacaagcgctggcagaaaatgaagatctacaacgatctg
gtggcggtcgtcggcggggtcacccaccgggcgggccaggtcaacgcgctgatgctcggc
ctgtacgacgccgaaggccggctgtggtatatcggccacgccggtaccgggcggttcacc
cagcagacttggcgggagctcacggagaaggtgcgggagatgaccctgcccgagcgaccg
ttcgtcaacgtgcccgaacggagcaaggatgcggtgtggatcaagcccctgctcacggtc
aaagtgagctatatggaatggaccgccggccggacgctgcgccagccgagcatccaggct
ctggtcggcgcccagccggcggactgcacgttcgggcagctggacggctga

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