Persephonella marina: PERMA_1252
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Entry
PERMA_1252 CDS
T00870
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pmx
Persephonella marina
Pathway
pmx00470
D-Amino acid metabolism
pmx00550
Peptidoglycan biosynthesis
pmx01100
Metabolic pathways
pmx01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PERMA_1252
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PERMA_1252
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PERMA_1252
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmx01011
]
PERMA_1252
Enzymes [BR:
pmx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PERMA_1252
Peptidoglycan biosynthesis and degradation proteins [BR:
pmx01011
]
Precursor biosynthesis
Amino acid ligase
PERMA_1252
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
GARS_A
ATP-grasp
RimK
ATPgrasp_Ter
Dala_Dala_lig_N
DREV
Motif
Other DBs
NCBI-ProteinID:
ACO03418
UniProt:
C0QQS9
LinkDB
All DBs
Position
complement(1177405..1178382)
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AA seq
325 aa
AA seq
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MRVLIIYNSDFSKVLFRLPKQTKEIYSPKTINKIADALRKKGHYVEIADGNIEIIDRLKE
FFSKGKGIVFNLSYGIQGEDRYAHIPSLLEMLGVPYTGSSPEGHTLALDKAVTKILLKYY
DIPTPDFHVFSPSDHDFSNVRFPAIVKPLKEALSLGITVVKDTDQMKKAVSRITEEFHQD
AIVEEFIRGREFSVGLIGNDEDVETLPVLEFDFGGDPDAIQTTYLKRHKPIEKICPADIP
EKTAKRMQELSKKVFHVLGLRDYARTDIRMDLEGNIYILEINSQASLGETGSFVTAAKTA
GYTYEDLIEKILNTAVKRYPYLLEG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagagttctgattatatacaacagcgatttttcaaaggttctgtttagacttcctaaa
cagacaaaggagatatactcacctaaaactataaataagatagcagatgctctaagaaaa
aaagggcattatgttgagatagctgacggaaatatagagataatagacagactgaaagag
tttttcagtaaaggaaaagggatagttttcaatctctcttatggaattcagggggaggac
aggtacgcacatataccatcccttttagagatgcttggtgttccatatacaggatcatcc
cctgaaggacatacacttgctcttgataaggctgtaacaaagatcctccttaagtattat
gatataccaacacctgattttcatgtattctccccatctgatcacgatttttccaatgta
agattccctgcaattgttaaaccccttaaagaagccctttcccttggtataacagttgtt
aaagatacagatcagatgaaaaaggctgtatccagaataacagaagagttccatcaggat
gcaattgttgaggagtttataaggggaagagagttctcagtcggtcttataggaaatgat
gaggatgtggaaacattacctgttttagagtttgattttggaggagatcctgatgcgata
cagacaacatacctgaaaagacacaaacctatagagaagatatgtcccgctgatatacct
gaaaagacagcaaaaagaatgcaggagctgagcaaaaaagttttccacgttcttggcctg
agggattatgcaagaactgacataagaatggaccttgaggggaatatatacatacttgag
ataaactcacaggcaagtctcggtgaaacaggctcattcgtcacagcagcaaaaactgca
ggatatacatatgaggatcttatagaaaaaattctaaatacagctgtaaaaagatatcct
tatcttctggaggggtga
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