Pseudomonas mendocina ymp: Pmen_0924
Help
Entry
Pmen_0924 CDS
T00510
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy00470
D-Amino acid metabolism
pmy00550
Peptidoglycan biosynthesis
pmy01100
Metabolic pathways
pmy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pmen_0924
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pmen_0924
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Pmen_0924
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmy01011
]
Pmen_0924
Enzymes [BR:
pmy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Pmen_0924
Peptidoglycan biosynthesis and degradation proteins [BR:
pmy01011
]
Precursor biosynthesis
Amino acid ligase
Pmen_0924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
GARS_A
ATP-grasp_5
RimK
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
ABP83692
UniProt:
A4XQS6
LinkDB
All DBs
Position
1044262..1045203
Genome browser
AA seq
313 aa
AA seq
DB search
MSLHSSLDPKAFGRVAVLFGGKSAEREVSLKSGNAVLSALQAAGVDAFGIDVGDDFLQRL
ASEKIDRAFIVLHGRGGEDGSMQGLLECAGIPYTGSGILASALAMDKLRTKQVWHSLGLP
TPRHAVLTSQADCEAAAAELGFPLIVKPAHEGSSIGMAKVESVEALIAAWQDAARYDSQV
LVEQWIAGPEYTVAVLRGEVLPPIGLGTPHSFYDYDAKYLADDTQYRIPCGLSAEKEAEL
KELTARACEAVGTQGWARADVMQDASGQFWLLEVNTVPGMTDHSLVPMAARAAGLDFQQL
VLAILADSVEARG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgcacagtagcctcgatcccaaggctttcggtcgcgtcgccgtgctgttcggc
ggcaagagcgccgagcgcgaggtgtcgctgaaatccggcaatgccgtgctcagcgccctg
caggcggccggggtggacgccttcggcatcgacgtgggcgatgatttcctgcagcgcctt
gccagcgagaagatcgaccgcgccttcatcgtgctgcacggccgcggtggcgaggatggc
tccatgcagggcctgctcgagtgcgccggcattccctacaccggcagcggcatcctcgcc
tcggcgctggccatggacaagctgcgtaccaagcaggtctggcacagcctcggcctgccg
acgccgcgtcacgccgtgctcacgtcgcaggccgactgcgaagcggcggctgccgaactg
ggtttcccgctgatcgtcaagccggcccatgaaggctccagcatcggcatggccaaggtc
gagagcgtcgaggcgctgatcgcggcctggcaggacgccgcgcgctacgacagtcaggta
ctggtcgagcagtggatcgccggccccgagtacaccgtggccgtgctgcgtggcgaagtg
ctgccgcccattggcctgggcacgccgcacagcttctacgactacgacgccaagtacctg
gccgatgacacccagtaccgcattccctgcggcctctcggccgagaaggaggcggaactg
aaagagctgaccgcgcgcgcctgcgaggccgtgggcacccagggctgggcgcgtgcagac
gtgatgcaggatgccagtggccagttctggctgctggaagtgaacaccgtaccgggcatg
accgatcacagcctggtaccgatggccgcgcgcgccgccggtctggatttccagcagctg
gtactggcgatcctggccgacagcgtcgaggcgaggggttaa
DBGET
integrated database retrieval system